RNA–Protein interactions for RNA: ENST00000557193.1

NEMF-214, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-214ENST00000557193 CRISPLD2Q9H0B8 497 aa12.81□□□□□ -0.36
NEMF-214ENST00000557193 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
NEMF-214ENST00000557193 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
NEMF-214ENST00000557193 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
NEMF-214ENST00000557193 TMEM121BQ9BXQ6 578 aaPredicted RBP12.79□□□□□ -0.36
NEMF-214ENST00000557193 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
NEMF-214ENST00000557193 MFSD10Q14728 455 aa12.78□□□□□ -0.36
NEMF-214ENST00000557193 E2F4Q16254 413 aa12.78□□□□□ -0.36
NEMF-214ENST00000557193 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
NEMF-214ENST00000557193 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
NEMF-214ENST00000557193 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
NEMF-214ENST00000557193 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
NEMF-214ENST00000557193 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
NEMF-214ENST00000557193 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
NEMF-214ENST00000557193 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
NEMF-214ENST00000557193 FOXK1P85037 733 aa12.65□□□□□ -0.38
NEMF-214ENST00000557193 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
NEMF-214ENST00000557193 DSG2Q14126 1118 aa12.65□□□□□ -0.38
NEMF-214ENST00000557193 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
NEMF-214ENST00000557193 ABCC9O60706 1549 aa12.65□□□□□ -0.38
NEMF-214ENST00000557193 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
NEMF-214ENST00000557193 KIF3CO14782 793 aa12.62□□□□□ -0.39
NEMF-214ENST00000557193 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
NEMF-214ENST00000557193 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
NEMF-214ENST00000557193 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
NEMF-214ENST00000557193 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
NEMF-214ENST00000557193 TMEM92Q6UXU6 159 aa12.57□□□□□ -0.4
NEMF-214ENST00000557193 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.57□□□□□ -0.4
NEMF-214ENST00000557193 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
NEMF-214ENST00000557193 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
NEMF-214ENST00000557193 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
NEMF-214ENST00000557193 SEMA3EO15041 775 aa12.5□□□□□ -0.41
NEMF-214ENST00000557193 DPYSL4O14531 572 aa12.49□□□□□ -0.41
NEMF-214ENST00000557193 SMYD5Q6GMV2 418 aa12.49□□□□□ -0.41
NEMF-214ENST00000557193 NACADO15069 1562 aa12.47□□□□□ -0.41
NEMF-214ENST00000557193 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
NEMF-214ENST00000557193 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
NEMF-214ENST00000557193 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
NEMF-214ENST00000557193 PRKCSHP14314 528 aaPredicted RBP12.45□□□□□ -0.42
NEMF-214ENST00000557193 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
NEMF-214ENST00000557193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
NEMF-214ENST00000557193 TBC1D12O60347 775 aa12.43□□□□□ -0.42
NEMF-214ENST00000557193 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEMF-214ENST00000557193 SCUBE2Q9NQ36 999 aa12.43□□□□□ -0.42
NEMF-214ENST00000557193 PDIA6Q15084 440 aa12.42□□□□□ -0.42
NEMF-214ENST00000557193 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
NEMF-214ENST00000557193 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
NEMF-214ENST00000557193 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
NEMF-214ENST00000557193 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
NEMF-214ENST00000557193 SLC34A2O95436 690 aa12.4□□□□□ -0.42
NEMF-214ENST00000557193 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
NEMF-214ENST00000557193 PTCD2Q8WV60 388 aaKnown RBP12.38□□□□□ -0.43
NEMF-214ENST00000557193 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
NEMF-214ENST00000557193 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
NEMF-214ENST00000557193 MLLT3P42568 568 aaPredicted RBP12.34□□□□□ -0.43
NEMF-214ENST00000557193 EVI5O60447 810 aa12.32□□□□□ -0.44
NEMF-214ENST00000557193 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
NEMF-214ENST00000557193 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
NEMF-214ENST00000557193 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
NEMF-214ENST00000557193 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
NEMF-214ENST00000557193 PTGER2P43116 358 aa12.28□□□□□ -0.44
NEMF-214ENST00000557193 PCDHGA4Q9Y5G9 962 aa12.28□□□□□ -0.44
NEMF-214ENST00000557193 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
NEMF-214ENST00000557193 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
NEMF-214ENST00000557193 SNPHO15079 494 aa12.24□□□□□ -0.45
NEMF-214ENST00000557193 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
NEMF-214ENST00000557193 DDX12PQ92771 950 aa12.24□□□□□ -0.45
NEMF-214ENST00000557193 ZNF710Q8N1W2 664 aa12.23□□□□□ -0.45
NEMF-214ENST00000557193 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
NEMF-214ENST00000557193 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
NEMF-214ENST00000557193 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
NEMF-214ENST00000557193 LHX8Q68G74 356 aa12.2□□□□□ -0.46
NEMF-214ENST00000557193 SCRIBQ14160 1630 aa12.19□□□□□ -0.46
NEMF-214ENST00000557193 OSBPP22059 807 aa12.18□□□□□ -0.46
NEMF-214ENST00000557193 PHF14O94880 888 aa12.17□□□□□ -0.46
NEMF-214ENST00000557193 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
NEMF-214ENST00000557193 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
NEMF-214ENST00000557193 EPAS1Q99814 870 aa12.17□□□□□ -0.46
NEMF-214ENST00000557193 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
NEMF-214ENST00000557193 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
NEMF-214ENST00000557193 ZMYND10O75800 440 aa12.14□□□□□ -0.47
NEMF-214ENST00000557193 NUDT7P0C024 238 aa12.14□□□□□ -0.47
NEMF-214ENST00000557193 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
NEMF-214ENST00000557193 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEMF-214ENST00000557193 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
NEMF-214ENST00000557193 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
NEMF-214ENST00000557193 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
NEMF-214ENST00000557193 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
NEMF-214ENST00000557193 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
NEMF-214ENST00000557193 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
NEMF-214ENST00000557193 MAP3K7O43318 606 aa12.08□□□□□ -0.48
NEMF-214ENST00000557193 FOSBP53539 338 aa12.08□□□□□ -0.48
NEMF-214ENST00000557193 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
NEMF-214ENST00000557193 FCHSD2O94868 740 aa12.07□□□□□ -0.48
NEMF-214ENST00000557193 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
NEMF-214ENST00000557193 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
NEMF-214ENST00000557193 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
NEMF-214ENST00000557193 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
NEMF-214ENST00000557193 PRIM1P49642 420 aaKnown RBP12.05□□□□□ -0.48
NEMF-214ENST00000557193 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms