RNA–Protein interactions for RNA: ENST00000556936.5

CCDC175-204, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-204ENST00000556936 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
CCDC175-204ENST00000556936 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
CCDC175-204ENST00000556936 KHSRPQ92945 711 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC175-204ENST00000556936 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
CCDC175-204ENST00000556936 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
CCDC175-204ENST00000556936 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
CCDC175-204ENST00000556936 ADGRD1Q6QNK2 874 aa12.62□□□□□ -0.39
CCDC175-204ENST00000556936 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
CCDC175-204ENST00000556936 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
CCDC175-204ENST00000556936 NUDT7P0C024 238 aa12.53□□□□□ -0.4
CCDC175-204ENST00000556936 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
CCDC175-204ENST00000556936 TK2O00142 265 aa12.51□□□□□ -0.41
CCDC175-204ENST00000556936 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
CCDC175-204ENST00000556936 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
CCDC175-204ENST00000556936 KCTD12Q96CX2 325 aaKnown RBP12.49□□□□□ -0.41
CCDC175-204ENST00000556936 SOX12O15370 315 aa12.48□□□□□ -0.41
CCDC175-204ENST00000556936 HRO43593 1189 aa12.48□□□□□ -0.41
CCDC175-204ENST00000556936 A0A0G2JS52 829 aa12.44□□□□□ -0.42
CCDC175-204ENST00000556936 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
CCDC175-204ENST00000556936 FKBP8Q14318 412 aa12.43□□□□□ -0.42
CCDC175-204ENST00000556936 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
CCDC175-204ENST00000556936 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
CCDC175-204ENST00000556936 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
CCDC175-204ENST00000556936 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
CCDC175-204ENST00000556936 Q6ZNB5 142 aa12.4□□□□□ -0.42
CCDC175-204ENST00000556936 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
CCDC175-204ENST00000556936 SLC34A2O95436 690 aa12.37□□□□□ -0.43
CCDC175-204ENST00000556936 PTPN5P54829 565 aa12.34□□□□□ -0.43
CCDC175-204ENST00000556936 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
CCDC175-204ENST00000556936 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
CCDC175-204ENST00000556936 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
CCDC175-204ENST00000556936 KIF3CO14782 793 aa12.31□□□□□ -0.44
CCDC175-204ENST00000556936 PSEN2P49810 448 aa12.3□□□□□ -0.44
CCDC175-204ENST00000556936 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
CCDC175-204ENST00000556936 C2orf72A6NCS6 295 aa12.27□□□□□ -0.45
CCDC175-204ENST00000556936 TRIM41Q8WV44 630 aa12.26□□□□□ -0.45
CCDC175-204ENST00000556936 NLRP6P59044 892 aa12.2□□□□□ -0.46
CCDC175-204ENST00000556936 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
CCDC175-204ENST00000556936 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
CCDC175-204ENST00000556936 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
CCDC175-204ENST00000556936 LAPTM4AQ15012 233 aa12.16□□□□□ -0.46
CCDC175-204ENST00000556936 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
CCDC175-204ENST00000556936 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
CCDC175-204ENST00000556936 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
CCDC175-204ENST00000556936 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
CCDC175-204ENST00000556936 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
CCDC175-204ENST00000556936 CECR2Q9BXF3 1484 aa12.1□□□□□ -0.47
CCDC175-204ENST00000556936 RIOK3O14730 519 aaKnown RBP12.1□□□□□ -0.47
CCDC175-204ENST00000556936 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
CCDC175-204ENST00000556936 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
CCDC175-204ENST00000556936 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
CCDC175-204ENST00000556936 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
CCDC175-204ENST00000556936 GOLGA8CPA6NN73 597 aa12.07□□□□□ -0.48
CCDC175-204ENST00000556936 IFNLR1Q8IU57 520 aaPredicted RBP12.07□□□□□ -0.48
CCDC175-204ENST00000556936 LCE2BO14633 110 aa12.06□□□□□ -0.48
CCDC175-204ENST00000556936 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
CCDC175-204ENST00000556936 WNT2BQ93097 391 aa12.06□□□□□ -0.48
CCDC175-204ENST00000556936 SLC4A5Q9BY07 1137 aa12.05□□□□□ -0.48
CCDC175-204ENST00000556936 NACADO15069 1562 aa12.05□□□□□ -0.48
CCDC175-204ENST00000556936 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
CCDC175-204ENST00000556936 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
CCDC175-204ENST00000556936 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.49
CCDC175-204ENST00000556936 CC2D2AQ9P2K1 1620 aa11.99□□□□□ -0.49
CCDC175-204ENST00000556936 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
CCDC175-204ENST00000556936 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
CCDC175-204ENST00000556936 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
CCDC175-204ENST00000556936 GFRA3O60609 400 aa11.95□□□□□ -0.5
CCDC175-204ENST00000556936 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
CCDC175-204ENST00000556936 TBC1D12O60347 775 aa11.93□□□□□ -0.5
CCDC175-204ENST00000556936 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
CCDC175-204ENST00000556936 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
CCDC175-204ENST00000556936 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
CCDC175-204ENST00000556936 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
CCDC175-204ENST00000556936 CUX2O14529 1486 aa11.88□□□□□ -0.51
CCDC175-204ENST00000556936 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
CCDC175-204ENST00000556936 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
CCDC175-204ENST00000556936 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
CCDC175-204ENST00000556936 ZNF775Q96BV0 537 aaPredicted RBP11.85□□□□□ -0.51
CCDC175-204ENST00000556936 PTPREP23469 700 aa11.84□□□□□ -0.51
CCDC175-204ENST00000556936 KCNC4Q03721 635 aa11.84□□□□□ -0.51
CCDC175-204ENST00000556936 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
CCDC175-204ENST00000556936 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
CCDC175-204ENST00000556936 FOXK1P85037 733 aa11.82□□□□□ -0.52
CCDC175-204ENST00000556936 ZNF454Q8N9F8 522 aa11.82□□□□□ -0.52
CCDC175-204ENST00000556936 SHROOM4Q9ULL8 1493 aa11.82□□□□□ -0.52
CCDC175-204ENST00000556936 PLPP6Q8IY26 295 aa11.8□□□□□ -0.52
CCDC175-204ENST00000556936 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
CCDC175-204ENST00000556936 EIF4G1Q04637 1599 aaKnown RBP11.78□□□□□ -0.52
CCDC175-204ENST00000556936 SOWAHBA6NEL2 793 aa11.7□□□□□ -0.54
CCDC175-204ENST00000556936 BCAMP50895 628 aa11.7□□□□□ -0.54
CCDC175-204ENST00000556936 FOSBP53539 338 aa11.7□□□□□ -0.54
CCDC175-204ENST00000556936 DCAF8L2P0C7V8 631 aa11.68□□□□□ -0.54
CCDC175-204ENST00000556936 GPHNQ9NQX3 736 aaPredicted RBP11.68□□□□□ -0.54
CCDC175-204ENST00000556936 MYO15BQ96JP2 1530 aa11.67□□□□□ -0.54
CCDC175-204ENST00000556936 STK25O00506 426 aa11.67□□□□□ -0.54
CCDC175-204ENST00000556936 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
CCDC175-204ENST00000556936 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
CCDC175-204ENST00000556936 DSG2Q14126 1118 aa11.65□□□□□ -0.54
CCDC175-204ENST00000556936 LAPTM4BQ86VI4 370 aa11.64□□□□□ -0.55
CCDC175-204ENST00000556936 OXER1Q8TDS5 423 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms