RNA–Protein interactions for RNA: ENST00000556903.2

FDPSP3-201, Transcript of farnesyl diphosphate synthase pseudogene 3, humanhuman

BASIC

Gene FDPSP3, Length 1,013 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPSP3-201ENST00000556903 AKNAQ7Z591 1439 aa11.99□□□□□ -0.49
FDPSP3-201ENST00000556903 DENND4BO75064 1496 aaPredicted RBP11.99□□□□□ -0.49
FDPSP3-201ENST00000556903 ARHGEF40Q8TER5 1519 aa11.99□□□□□ -0.49
FDPSP3-201ENST00000556903 ADAMTSL3P82987 1691 aa11.98□□□□□ -0.49
FDPSP3-201ENST00000556903 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
FDPSP3-201ENST00000556903 RAPGEF3O95398 923 aa11.98□□□□□ -0.49
FDPSP3-201ENST00000556903 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
FDPSP3-201ENST00000556903 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.49
FDPSP3-201ENST00000556903 PLCH2O75038 1416 aa11.96□□□□□ -0.49
FDPSP3-201ENST00000556903 BCORL1Q5H9F3 1711 aa11.96□□□□□ -0.49
FDPSP3-201ENST00000556903 MYO5CQ9NQX4 1742 aa11.96□□□□□ -0.49
FDPSP3-201ENST00000556903 EHBP1L1Q8N3D4 1523 aa11.96□□□□□ -0.5
FDPSP3-201ENST00000556903 MAGI2Q86UL8 1455 aa11.95□□□□□ -0.5
FDPSP3-201ENST00000556903 KIF14Q15058 1648 aa11.94□□□□□ -0.5
FDPSP3-201ENST00000556903 ADRA2BP18089 450 aa11.94□□□□□ -0.5
FDPSP3-201ENST00000556903 TROQ12816 1431 aaPredicted RBP11.94□□□□□ -0.5
FDPSP3-201ENST00000556903 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
FDPSP3-201ENST00000556903 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
FDPSP3-201ENST00000556903 PTPRMP28827 1452 aa11.92□□□□□ -0.5
FDPSP3-201ENST00000556903 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
FDPSP3-201ENST00000556903 MADDQ8WXG6 1647 aa11.9□□□□□ -0.5
FDPSP3-201ENST00000556903 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
FDPSP3-201ENST00000556903 SCAPERQ9BY12 1400 aa11.9□□□□□ -0.5
FDPSP3-201ENST00000556903 SUPT6HQ7KZ85 1726 aaKnown RBP11.89□□□□□ -0.51
FDPSP3-201ENST00000556903 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
FDPSP3-201ENST00000556903 ARID4BQ4LE39 1312 aaPredicted RBP11.88□□□□□ -0.51
FDPSP3-201ENST00000556903 PCGF6Q9BYE7 350 aa11.88□□□□□ -0.51
FDPSP3-201ENST00000556903 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
FDPSP3-201ENST00000556903 KDM5CP41229 1560 aa11.87□□□□□ -0.51
FDPSP3-201ENST00000556903 YEATS2Q9ULM3 1422 aa11.86□□□□□ -0.51
FDPSP3-201ENST00000556903 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
FDPSP3-201ENST00000556903 PREX2Q70Z35 1606 aa11.86□□□□□ -0.51
FDPSP3-201ENST00000556903 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
FDPSP3-201ENST00000556903 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
FDPSP3-201ENST00000556903 RIMS1Q86UR5 1692 aaKnown RBP11.86□□□□□ -0.51
FDPSP3-201ENST00000556903 ATP10AO60312 1499 aa11.85□□□□□ -0.51
FDPSP3-201ENST00000556903 SIGLEC1Q9BZZ2 1709 aa11.85□□□□□ -0.51
FDPSP3-201ENST00000556903 MYOM3Q5VTT5 1437 aa11.85□□□□□ -0.51
FDPSP3-201ENST00000556903 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
FDPSP3-201ENST00000556903 C9orf84Q5VXU9 1444 aa11.84□□□□□ -0.51
FDPSP3-201ENST00000556903 FER1L4A9Z1Z3 1794 aa11.83□□□□□ -0.52
FDPSP3-201ENST00000556903 FGD6Q6ZV73 1430 aa11.83□□□□□ -0.52
FDPSP3-201ENST00000556903 REREQ9P2R6 1566 aa11.83□□□□□ -0.52
FDPSP3-201ENST00000556903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.82□□□□□ -0.52
FDPSP3-201ENST00000556903 ABCC1P33527 1531 aa11.82□□□□□ -0.52
FDPSP3-201ENST00000556903 KCNA4P22459 653 aa11.82□□□□□ -0.52
FDPSP3-201ENST00000556903 MIA2Q96PC5 1412 aa11.82□□□□□ -0.52
FDPSP3-201ENST00000556903 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
FDPSP3-201ENST00000556903 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
FDPSP3-201ENST00000556903 LMTK3Q96Q04 1460 aa11.81□□□□□ -0.52
FDPSP3-201ENST00000556903 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
FDPSP3-201ENST00000556903 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
FDPSP3-201ENST00000556903 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
FDPSP3-201ENST00000556903 CFDP1Q9UEE9 299 aaPredicted RBP11.8□□□□□ -0.52
FDPSP3-201ENST00000556903 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
FDPSP3-201ENST00000556903 GPATCH8Q9UKJ3 1502 aaKnown RBP11.78□□□□□ -0.52
FDPSP3-201ENST00000556903 AGLP35573 1532 aa11.77□□□□□ -0.52
FDPSP3-201ENST00000556903 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
FDPSP3-201ENST00000556903 PPP6R1Q9UPN7 881 aa11.77□□□□□ -0.53
FDPSP3-201ENST00000556903 ABCA6Q8N139 1617 aa11.77□□□□□ -0.53
FDPSP3-201ENST00000556903 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.53
FDPSP3-201ENST00000556903 ILDR1Q86SU0 546 aaPredicted RBP11.76□□□□□ -0.53
FDPSP3-201ENST00000556903 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
FDPSP3-201ENST00000556903 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
FDPSP3-201ENST00000556903 KIDINS220Q9ULH0 1771 aa11.75□□□□□ -0.53
FDPSP3-201ENST00000556903 PLEKHH2Q8IVE3 1493 aa11.75□□□□□ -0.53
FDPSP3-201ENST00000556903 PREX1Q8TCU6 1659 aa11.75□□□□□ -0.53
FDPSP3-201ENST00000556903 KIAA1107Q9UPP5 1409 aa11.74□□□□□ -0.53
FDPSP3-201ENST00000556903 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
FDPSP3-201ENST00000556903 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
FDPSP3-201ENST00000556903 MLECQ14165 292 aa11.73□□□□□ -0.53
FDPSP3-201ENST00000556903 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
FDPSP3-201ENST00000556903 SYCP2Q9BX26 1530 aa11.72□□□□□ -0.53
FDPSP3-201ENST00000556903 ITGAEP38570 1179 aa11.72□□□□□ -0.53
FDPSP3-201ENST00000556903 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
FDPSP3-201ENST00000556903 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
FDPSP3-201ENST00000556903 INO80Q9ULG1 1556 aaPredicted RBP11.7□□□□□ -0.54
FDPSP3-201ENST00000556903 CAMSAP2Q08AD1 1489 aa11.7□□□□□ -0.54
FDPSP3-201ENST00000556903 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
FDPSP3-201ENST00000556903 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
FDPSP3-201ENST00000556903 ATP7AQ04656 1500 aa11.69□□□□□ -0.54
FDPSP3-201ENST00000556903 MROH2AA6NES4 1674 aa11.68□□□□□ -0.54
FDPSP3-201ENST00000556903 C3P01024 1663 aa11.68□□□□□ -0.54
FDPSP3-201ENST00000556903 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
FDPSP3-201ENST00000556903 PLXNC1O60486 1568 aa11.67□□□□□ -0.54
FDPSP3-201ENST00000556903 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
FDPSP3-201ENST00000556903 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
FDPSP3-201ENST00000556903 TSPY10P0CW01 314 aa11.66□□□□□ -0.54
FDPSP3-201ENST00000556903 HSPA2P54652 639 aa11.66□□□□□ -0.54
FDPSP3-201ENST00000556903 ESF1Q9H501 851 aaKnown RBP11.66□□□□□ -0.54
FDPSP3-201ENST00000556903 UHRF1BP1Q6BDS2 1440 aa11.66□□□□□ -0.54
FDPSP3-201ENST00000556903 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
FDPSP3-201ENST00000556903 ABCC5O15440 1437 aa11.65□□□□□ -0.54
FDPSP3-201ENST00000556903 DAPK1P53355 1430 aa11.65□□□□□ -0.54
FDPSP3-201ENST00000556903 RTEL1-TNFRSF6BF6WH68 1400 aa11.64□□□□□ -0.55
FDPSP3-201ENST00000556903 CEBPAP49715 358 aaPredicted RBP11.64□□□□□ -0.55
FDPSP3-201ENST00000556903 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
FDPSP3-201ENST00000556903 FOXD1Q16676 465 aa11.64□□□□□ -0.55
FDPSP3-201ENST00000556903 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
FDPSP3-201ENST00000556903 A2MP01023 1474 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms