RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 ARAP3Q8WWN8 1544 aa22.2■■□□□ 1.14
CIPC-207ENST00000556863 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
CIPC-207ENST00000556863 FANCAO15360 1455 aa22.17■■□□□ 1.14
CIPC-207ENST00000556863 TEX14Q8IWB6 1497 aa22.17■■□□□ 1.14
CIPC-207ENST00000556863 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
CIPC-207ENST00000556863 SAMD9LQ8IVG5 1584 aa22.15■■□□□ 1.14
CIPC-207ENST00000556863 NEO1Q92859 1461 aa22.12■■□□□ 1.13
CIPC-207ENST00000556863 CFDP1Q9UEE9 299 aaPredicted RBP22.11■■□□□ 1.13
CIPC-207ENST00000556863 AKNAQ7Z591 1439 aa22.11■■□□□ 1.13
CIPC-207ENST00000556863 EFCAB2Q5VUJ9 269 aa22.1■■□□□ 1.13
CIPC-207ENST00000556863 ZNF777Q9ULD5 760 aaPredicted RBP22.1■■□□□ 1.13
CIPC-207ENST00000556863 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
CIPC-207ENST00000556863 FGD6Q6ZV73 1430 aa22.09■■□□□ 1.13
CIPC-207ENST00000556863 ABCC1P33527 1531 aa22.09■■□□□ 1.13
CIPC-207ENST00000556863 CAMSAP2Q08AD1 1489 aa22.09■■□□□ 1.13
CIPC-207ENST00000556863 ZNF644Q9H582 1327 aaPredicted RBP22.07■■□□□ 1.12
CIPC-207ENST00000556863 ADGRL1O94910 1474 aa22.07■■□□□ 1.12
CIPC-207ENST00000556863 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
CIPC-207ENST00000556863 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
CIPC-207ENST00000556863 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
CIPC-207ENST00000556863 KDM6BO15054 1643 aa22.05■■□□□ 1.12
CIPC-207ENST00000556863 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
CIPC-207ENST00000556863 SCAPERQ9BY12 1400 aa22.03■■□□□ 1.12
CIPC-207ENST00000556863 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
CIPC-207ENST00000556863 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
CIPC-207ENST00000556863 RICTORQ6R327 1708 aa22.02■■□□□ 1.12
CIPC-207ENST00000556863 PLEKHH2Q8IVE3 1493 aa22■■□□□ 1.11
CIPC-207ENST00000556863 DENND4BO75064 1496 aaPredicted RBP21.99■■□□□ 1.11
CIPC-207ENST00000556863 HNRNPMP52272 730 aaKnown RBP eCLIP21.98■■□□□ 1.11
CIPC-207ENST00000556863 POGZQ7Z3K3 1410 aa21.97■■□□□ 1.11
CIPC-207ENST00000556863 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
CIPC-207ENST00000556863 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
CIPC-207ENST00000556863 KIAA1107Q9UPP5 1409 aa21.97■■□□□ 1.11
CIPC-207ENST00000556863 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
CIPC-207ENST00000556863 ARHGEF5Q12774 1597 aa21.95■■□□□ 1.11
CIPC-207ENST00000556863 RAPGEF3O95398 923 aa21.95■■□□□ 1.1
CIPC-207ENST00000556863 FAM50AQ14320 339 aaKnown RBP21.95■■□□□ 1.1
CIPC-207ENST00000556863 DNMT1P26358 1616 aaKnown RBP21.94■■□□□ 1.1
CIPC-207ENST00000556863 CROCC2H7BZ55 1655 aa21.94■■□□□ 1.1
CIPC-207ENST00000556863 KDM5CP41229 1560 aa21.93■■□□□ 1.1
CIPC-207ENST00000556863 ZNF518AQ6AHZ1 1483 aa21.92■■□□□ 1.1
CIPC-207ENST00000556863 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
CIPC-207ENST00000556863 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
CIPC-207ENST00000556863 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
CIPC-207ENST00000556863 HECW2Q9P2P5 1572 aa21.88■■□□□ 1.09
CIPC-207ENST00000556863 DAPK1P53355 1430 aa21.88■■□□□ 1.09
CIPC-207ENST00000556863 INO80Q9ULG1 1556 aaPredicted RBP21.87■■□□□ 1.09
CIPC-207ENST00000556863 ABCC5O15440 1437 aa21.87■■□□□ 1.09
CIPC-207ENST00000556863 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
CIPC-207ENST00000556863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.85■■□□□ 1.09
CIPC-207ENST00000556863 ZFYVE16Q7Z3T8 1539 aa21.85■■□□□ 1.09
CIPC-207ENST00000556863 ATP7AQ04656 1500 aa21.84■■□□□ 1.09
CIPC-207ENST00000556863 MAST1Q9Y2H9 1570 aa21.83■■□□□ 1.09
CIPC-207ENST00000556863 ABCA6Q8N139 1617 aa21.83■■□□□ 1.08
CIPC-207ENST00000556863 ITGAEP38570 1179 aa21.82■■□□□ 1.08
CIPC-207ENST00000556863 ADGBQ8N7X0 1667 aa21.82■■□□□ 1.08
CIPC-207ENST00000556863 SPAG9O60271 1321 aaKnown RBP21.81■■□□□ 1.08
CIPC-207ENST00000556863 PTPRKQ15262 1439 aa21.81■■□□□ 1.08
CIPC-207ENST00000556863 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
CIPC-207ENST00000556863 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
CIPC-207ENST00000556863 ARHGEF40Q8TER5 1519 aa21.81■■□□□ 1.08
CIPC-207ENST00000556863 MLH3Q9UHC1 1453 aa21.81■■□□□ 1.08
CIPC-207ENST00000556863 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
CIPC-207ENST00000556863 DIP2CQ9Y2E4 1556 aa21.8■■□□□ 1.08
CIPC-207ENST00000556863 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
CIPC-207ENST00000556863 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
CIPC-207ENST00000556863 MAGI2Q86UL8 1455 aa21.77■■□□□ 1.08
CIPC-207ENST00000556863 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
CIPC-207ENST00000556863 PLXNC1O60486 1568 aa21.76■■□□□ 1.07
CIPC-207ENST00000556863 TSPY4P0CV99 314 aa21.76■■□□□ 1.07
CIPC-207ENST00000556863 TSPY10P0CW01 314 aa21.76■■□□□ 1.07
CIPC-207ENST00000556863 RTEL1-TNFRSF6BF6WH68 1400 aa21.75■■□□□ 1.07
CIPC-207ENST00000556863 SIGLEC1Q9BZZ2 1709 aa21.73■■□□□ 1.07
CIPC-207ENST00000556863 ADGRL2O95490 1459 aa21.72■■□□□ 1.07
CIPC-207ENST00000556863 ATP10AO60312 1499 aa21.69■■□□□ 1.06
CIPC-207ENST00000556863 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
CIPC-207ENST00000556863 ANKRD30AQ9BXX3 1397 aa21.67■■□□□ 1.06
CIPC-207ENST00000556863 A2MP01023 1474 aa21.66■■□□□ 1.06
CIPC-207ENST00000556863 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
CIPC-207ENST00000556863 RRP7BPQ9NSQ0 103 aa21.66■■□□□ 1.06
CIPC-207ENST00000556863 REREQ9P2R6 1566 aa21.65■■□□□ 1.06
CIPC-207ENST00000556863 GCC2Q8IWJ2 1684 aa21.65■■□□□ 1.06
CIPC-207ENST00000556863 ROCK1Q13464 1354 aa21.64■■□□□ 1.06
CIPC-207ENST00000556863 DUOX2Q9NRD8 1548 aa21.64■■□□□ 1.05
CIPC-207ENST00000556863 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
CIPC-207ENST00000556863 DHX29Q7Z478 1369 aaKnown RBP21.6■■□□□ 1.05
CIPC-207ENST00000556863 EIF2AK4Q9P2K8 1649 aaKnown RBP21.58■■□□□ 1.05
CIPC-207ENST00000556863 NAIPQ13075 1403 aa21.57■■□□□ 1.04
CIPC-207ENST00000556863 AGLP35573 1532 aa21.57■■□□□ 1.04
CIPC-207ENST00000556863 BCORL1Q5H9F3 1711 aa21.57■■□□□ 1.04
CIPC-207ENST00000556863 HFM1A2PYH4 1435 aa21.56■■□□□ 1.04
CIPC-207ENST00000556863 ERBINQ96RT1 1412 aa21.56■■□□□ 1.04
CIPC-207ENST00000556863 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
CIPC-207ENST00000556863 ARID4BQ4LE39 1312 aaPredicted RBP21.55■■□□□ 1.04
CIPC-207ENST00000556863 RNF17Q9BXT8 1623 aaKnown RBP21.52■■□□□ 1.04
CIPC-207ENST00000556863 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
CIPC-207ENST00000556863 KIF3BO15066 747 aa21.51■■□□□ 1.03
CIPC-207ENST00000556863 MLECQ14165 292 aa21.5■■□□□ 1.03
CIPC-207ENST00000556863 DEPDC5O75140 1603 aa21.5■■□□□ 1.03
CIPC-207ENST00000556863 UNC13BO14795 1591 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms