RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 MLECQ14165 292 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 ARHGAP5Q13017 1502 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 ARHGEF40Q8TER5 1519 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
LGMN-213ENST00000556790 RIMS1Q86UR5 1692 aaKnown RBP10.3□□□□□ -0.76
LGMN-213ENST00000556790 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
LGMN-213ENST00000556790 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
LGMN-213ENST00000556790 AFAP1Q8N556 730 aa10.29□□□□□ -0.76
LGMN-213ENST00000556790 FYCO1Q9BQS8 1478 aa10.29□□□□□ -0.76
LGMN-213ENST00000556790 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
LGMN-213ENST00000556790 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
LGMN-213ENST00000556790 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
LGMN-213ENST00000556790 POGZQ7Z3K3 1410 aa10.28□□□□□ -0.76
LGMN-213ENST00000556790 CDK11AQ9UQ88 783 aaPredicted RBP10.28□□□□□ -0.76
LGMN-213ENST00000556790 PREX2Q70Z35 1606 aa10.28□□□□□ -0.76
LGMN-213ENST00000556790 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.77
LGMN-213ENST00000556790 ZNF777Q9ULD5 760 aaPredicted RBP10.27□□□□□ -0.77
LGMN-213ENST00000556790 PTPRMP28827 1452 aa10.27□□□□□ -0.77
LGMN-213ENST00000556790 CCDC18Q5T9S5 1454 aa10.27□□□□□ -0.77
LGMN-213ENST00000556790 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.77
LGMN-213ENST00000556790 TRAPPC8Q9Y2L5 1435 aa10.26□□□□□ -0.77
LGMN-213ENST00000556790 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
LGMN-213ENST00000556790 ITSN2Q9NZM3 1697 aa10.25□□□□□ -0.77
LGMN-213ENST00000556790 SAMD9LQ8IVG5 1584 aa10.24□□□□□ -0.77
LGMN-213ENST00000556790 ABCA6Q8N139 1617 aa10.24□□□□□ -0.77
LGMN-213ENST00000556790 ABCC1P33527 1531 aa10.23□□□□□ -0.77
LGMN-213ENST00000556790 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.77
LGMN-213ENST00000556790 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
LGMN-213ENST00000556790 FER1L4A9Z1Z3 1794 aa10.22□□□□□ -0.77
LGMN-213ENST00000556790 CEBPAP49715 358 aaPredicted RBP10.22□□□□□ -0.77
LGMN-213ENST00000556790 ZNF644Q9H582 1327 aaPredicted RBP10.22□□□□□ -0.77
LGMN-213ENST00000556790 SYCP2Q9BX26 1530 aa10.22□□□□□ -0.77
LGMN-213ENST00000556790 GPATCH8Q9UKJ3 1502 aaKnown RBP10.22□□□□□ -0.77
LGMN-213ENST00000556790 KDM5CP41229 1560 aa10.22□□□□□ -0.77
LGMN-213ENST00000556790 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.78
LGMN-213ENST00000556790 ATP10AO60312 1499 aa10.2□□□□□ -0.78
LGMN-213ENST00000556790 HSPA2P54652 639 aa10.2□□□□□ -0.78
LGMN-213ENST00000556790 TIAM1Q13009 1591 aa10.2□□□□□ -0.78
LGMN-213ENST00000556790 MTUS2Q5JR59 1369 aa10.2□□□□□ -0.78
LGMN-213ENST00000556790 ZNF518AQ6AHZ1 1483 aa10.2□□□□□ -0.78
LGMN-213ENST00000556790 C9orf84Q5VXU9 1444 aa10.19□□□□□ -0.78
LGMN-213ENST00000556790 MAGI2Q86UL8 1455 aa10.18□□□□□ -0.78
LGMN-213ENST00000556790 LMTK3Q96Q04 1460 aa10.17□□□□□ -0.78
LGMN-213ENST00000556790 CCNB3Q8WWL7 1395 aa10.17□□□□□ -0.78
LGMN-213ENST00000556790 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
LGMN-213ENST00000556790 CFDP1Q9UEE9 299 aaPredicted RBP10.17□□□□□ -0.78
LGMN-213ENST00000556790 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
LGMN-213ENST00000556790 EHBP1L1Q8N3D4 1523 aa10.16□□□□□ -0.78
LGMN-213ENST00000556790 MLH3Q9UHC1 1453 aa10.15□□□□□ -0.78
LGMN-213ENST00000556790 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
LGMN-213ENST00000556790 C3P01024 1663 aa10.13□□□□□ -0.79
LGMN-213ENST00000556790 NCOA2Q15596 1464 aa10.13□□□□□ -0.79
LGMN-213ENST00000556790 VPS8Q8N3P4 1428 aa10.13□□□□□ -0.79
LGMN-213ENST00000556790 INO80Q9ULG1 1556 aaPredicted RBP10.13□□□□□ -0.79
LGMN-213ENST00000556790 ATP7AQ04656 1500 aa10.12□□□□□ -0.79
LGMN-213ENST00000556790 SPAG9O60271 1321 aaKnown RBP10.12□□□□□ -0.79
LGMN-213ENST00000556790 CAMSAP2Q08AD1 1489 aa10.1□□□□□ -0.79
LGMN-213ENST00000556790 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
LGMN-213ENST00000556790 REREQ9P2R6 1566 aa10.1□□□□□ -0.79
LGMN-213ENST00000556790 FOXD1Q16676 465 aa10.1□□□□□ -0.79
LGMN-213ENST00000556790 LRRC9Q6ZRR7 1453 aa10.1□□□□□ -0.79
LGMN-213ENST00000556790 CLTCQ00610 1675 aaKnown RBP10.09□□□□□ -0.79
LGMN-213ENST00000556790 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
LGMN-213ENST00000556790 PREX1Q8TCU6 1659 aa10.09□□□□□ -0.79
LGMN-213ENST00000556790 GGT6Q6P531 493 aa10.08□□□□□ -0.8
LGMN-213ENST00000556790 KIAA1107Q9UPP5 1409 aa10.07□□□□□ -0.8
LGMN-213ENST00000556790 AGLP35573 1532 aa10.07□□□□□ -0.8
LGMN-213ENST00000556790 PLXNC1O60486 1568 aa10.07□□□□□ -0.8
LGMN-213ENST00000556790 A2MP01023 1474 aa10.07□□□□□ -0.8
LGMN-213ENST00000556790 STRCQ7RTU9 1775 aa10.06□□□□□ -0.8
LGMN-213ENST00000556790 PLEKHH2Q8IVE3 1493 aa10.05□□□□□ -0.8
LGMN-213ENST00000556790 ESF1Q9H501 851 aaKnown RBP10.04□□□□□ -0.8
LGMN-213ENST00000556790 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
LGMN-213ENST00000556790 PPARGC1BQ86YN6 1023 aaKnown RBP10.03□□□□□ -0.8
LGMN-213ENST00000556790 ZMYM3Q14202 1370 aa10.02□□□□□ -0.8
LGMN-213ENST00000556790 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
LGMN-213ENST00000556790 KIF3BO15066 747 aa10.01□□□□□ -0.81
LGMN-213ENST00000556790 FBXO31Q5XUX0 539 aaPredicted RBP10.01□□□□□ -0.81
LGMN-213ENST00000556790 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
LGMN-213ENST00000556790 MYOM3Q5VTT5 1437 aa10□□□□□ -0.81
LGMN-213ENST00000556790 ARHGEF5Q12774 1597 aa10□□□□□ -0.81
LGMN-213ENST00000556790 DHX29Q7Z478 1369 aaKnown RBP10□□□□□ -0.81
LGMN-213ENST00000556790 MAP3K1Q13233 1512 aa9.99□□□□□ -0.81
LGMN-213ENST00000556790 MYO3AQ8NEV4 1616 aa9.99□□□□□ -0.81
LGMN-213ENST00000556790 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
LGMN-213ENST00000556790 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
LGMN-213ENST00000556790 CFAP65Q6ZU64 1925 aaKnown RBP9.98□□□□□ -0.81
LGMN-213ENST00000556790 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
LGMN-213ENST00000556790 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
LGMN-213ENST00000556790 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
LGMN-213ENST00000556790 RTEL1-TNFRSF6BF6WH68 1400 aa9.98□□□□□ -0.81
LGMN-213ENST00000556790 PTPRKQ15262 1439 aa9.98□□□□□ -0.81
LGMN-213ENST00000556790 CEP152O94986 1710 aa9.97□□□□□ -0.81
LGMN-213ENST00000556790 CNTLNQ9NXG0 1405 aa9.97□□□□□ -0.81
LGMN-213ENST00000556790 CROCC2H7BZ55 1655 aa9.96□□□□□ -0.81
LGMN-213ENST00000556790 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
LGMN-213ENST00000556790 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms