RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.65
PRPF39-211ENST00000556782 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
PRPF39-211ENST00000556782 ZSWIM6Q9HCJ5 1215 aa10.96□□□□□ -0.65
PRPF39-211ENST00000556782 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
PRPF39-211ENST00000556782 SOX12O15370 315 aa10.92□□□□□ -0.66
PRPF39-211ENST00000556782 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
PRPF39-211ENST00000556782 ZNF687Q8N1G0 1237 aa10.91□□□□□ -0.66
PRPF39-211ENST00000556782 MYT1LQ9UL68 1186 aa10.91□□□□□ -0.66
PRPF39-211ENST00000556782 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
PRPF39-211ENST00000556782 RIOK3O14730 519 aaKnown RBP10.86□□□□□ -0.67
PRPF39-211ENST00000556782 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
PRPF39-211ENST00000556782 SHROOM4Q9ULL8 1493 aa10.85□□□□□ -0.67
PRPF39-211ENST00000556782 PTGER2P43116 358 aa10.84□□□□□ -0.67
PRPF39-211ENST00000556782 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
PRPF39-211ENST00000556782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
PRPF39-211ENST00000556782 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
PRPF39-211ENST00000556782 ZFP91Q96JP5 570 aaPredicted RBP10.83□□□□□ -0.68
PRPF39-211ENST00000556782 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
PRPF39-211ENST00000556782 ARSIQ5FYB1 569 aa10.82□□□□□ -0.68
PRPF39-211ENST00000556782 ANKRD13DQ6ZTN6 518 aa10.79□□□□□ -0.68
PRPF39-211ENST00000556782 RNF25Q96BH1 459 aaPredicted RBP10.79□□□□□ -0.68
PRPF39-211ENST00000556782 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
PRPF39-211ENST00000556782 NLRP6P59044 892 aa10.76□□□□□ -0.69
PRPF39-211ENST00000556782 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRPF39-211ENST00000556782 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
PRPF39-211ENST00000556782 LSM11P83369 360 aaKnown RBP eCLIP10.71□□□□□ -0.69
PRPF39-211ENST00000556782 FBXO22Q8NEZ5 403 aa10.69□□□□□ -0.7
PRPF39-211ENST00000556782 BCL11BQ9C0K0 894 aaPredicted RBP10.68□□□□□ -0.7
PRPF39-211ENST00000556782 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
PRPF39-211ENST00000556782 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
PRPF39-211ENST00000556782 PBX2P40425 430 aa10.66□□□□□ -0.7
PRPF39-211ENST00000556782 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
PRPF39-211ENST00000556782 KIF3CO14782 793 aa10.64□□□□□ -0.71
PRPF39-211ENST00000556782 NUDT7P0C024 238 aa10.64□□□□□ -0.71
PRPF39-211ENST00000556782 C2orf72A6NCS6 295 aa10.63□□□□□ -0.71
PRPF39-211ENST00000556782 MFRPQ9BY79 579 aa10.62□□□□□ -0.71
PRPF39-211ENST00000556782 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
PRPF39-211ENST00000556782 LHX6Q9UPM6 363 aa10.6□□□□□ -0.71
PRPF39-211ENST00000556782 SLC34A2O95436 690 aa10.59□□□□□ -0.71
PRPF39-211ENST00000556782 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
PRPF39-211ENST00000556782 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
PRPF39-211ENST00000556782 STK25O00506 426 aa10.58□□□□□ -0.72
PRPF39-211ENST00000556782 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
PRPF39-211ENST00000556782 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
PRPF39-211ENST00000556782 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
PRPF39-211ENST00000556782 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
PRPF39-211ENST00000556782 PSDA5PKW4 1024 aaPredicted RBP10.52□□□□□ -0.73
PRPF39-211ENST00000556782 ARHGAP33O14559 1287 aa10.52□□□□□ -0.73
PRPF39-211ENST00000556782 ADGRD1Q6QNK2 874 aa10.51□□□□□ -0.73
PRPF39-211ENST00000556782 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
PRPF39-211ENST00000556782 TK2O00142 265 aa10.45□□□□□ -0.74
PRPF39-211ENST00000556782 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
PRPF39-211ENST00000556782 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
PRPF39-211ENST00000556782 STAC3Q96MF2 364 aa10.41□□□□□ -0.74
PRPF39-211ENST00000556782 PPP1R37O75864 691 aa10.4□□□□□ -0.74
PRPF39-211ENST00000556782 PSEN2P49810 448 aa10.4□□□□□ -0.74
PRPF39-211ENST00000556782 HRO43593 1189 aa10.39□□□□□ -0.75
PRPF39-211ENST00000556782 PKD2Q13563 968 aa10.39□□□□□ -0.75
PRPF39-211ENST00000556782 PPP4R3BQ5MIZ7 849 aa10.39□□□□□ -0.75
PRPF39-211ENST00000556782 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
PRPF39-211ENST00000556782 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
PRPF39-211ENST00000556782 RGL2O15211 777 aa10.38□□□□□ -0.75
PRPF39-211ENST00000556782 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
PRPF39-211ENST00000556782 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
PRPF39-211ENST00000556782 TBC1D12O60347 775 aa10.36□□□□□ -0.75
PRPF39-211ENST00000556782 PLPP6Q8IY26 295 aa10.36□□□□□ -0.75
PRPF39-211ENST00000556782 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
PRPF39-211ENST00000556782 FOXK1P85037 733 aa10.35□□□□□ -0.75
PRPF39-211ENST00000556782 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
PRPF39-211ENST00000556782 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
PRPF39-211ENST00000556782 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
PRPF39-211ENST00000556782 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
PRPF39-211ENST00000556782 HMGXB3Q12766 1538 aa10.32□□□□□ -0.76
PRPF39-211ENST00000556782 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
PRPF39-211ENST00000556782 PEG3Q9GZU2 1588 aa10.29□□□□□ -0.76
PRPF39-211ENST00000556782 DSG2Q14126 1118 aa10.28□□□□□ -0.76
PRPF39-211ENST00000556782 PTPN5P54829 565 aa10.27□□□□□ -0.77
PRPF39-211ENST00000556782 MROH2BQ7Z745 1585 aa10.26□□□□□ -0.77
PRPF39-211ENST00000556782 BAZ1BQ9UIG0 1483 aaKnown RBP10.26□□□□□ -0.77
PRPF39-211ENST00000556782 VPS9D1Q9Y2B5 631 aa10.26□□□□□ -0.77
PRPF39-211ENST00000556782 RGS20O76081 388 aa10.23□□□□□ -0.77
PRPF39-211ENST00000556782 ZNF454Q8N9F8 522 aa10.21□□□□□ -0.77
PRPF39-211ENST00000556782 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
PRPF39-211ENST00000556782 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
PRPF39-211ENST00000556782 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
PRPF39-211ENST00000556782 GOLGA8CPA6NN73 597 aa10.19□□□□□ -0.78
PRPF39-211ENST00000556782 UPF1Q92900 1129 aaKnown RBP eCLIP10.19□□□□□ -0.78
PRPF39-211ENST00000556782 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
PRPF39-211ENST00000556782 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
PRPF39-211ENST00000556782 PTPREP23469 700 aa10.17□□□□□ -0.78
PRPF39-211ENST00000556782 THSD4Q6ZMP0 1018 aa10.17□□□□□ -0.78
PRPF39-211ENST00000556782 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
PRPF39-211ENST00000556782 NESP48681 1621 aa10.16□□□□□ -0.78
PRPF39-211ENST00000556782 BHMG1C9JSJ3 638 aaPredicted RBP10.16□□□□□ -0.78
PRPF39-211ENST00000556782 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
PRPF39-211ENST00000556782 IRX2Q9BZI1 471 aaPredicted RBP10.15□□□□□ -0.78
PRPF39-211ENST00000556782 WNT2BQ93097 391 aa10.14□□□□□ -0.79
PRPF39-211ENST00000556782 WIZO95785 1651 aa10.14□□□□□ -0.79
PRPF39-211ENST00000556782 CUX2O14529 1486 aa10.13□□□□□ -0.79
PRPF39-211ENST00000556782 FOSBP53539 338 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms