RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 KIF14Q15058 1648 aa26.25■■□□□ 1.79
RCCD1-207ENST00000556774 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
RCCD1-207ENST00000556774 SCAPERQ9BY12 1400 aa26.25■■□□□ 1.79
RCCD1-207ENST00000556774 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
RCCD1-207ENST00000556774 FBXO41Q8TF61 875 aa26.23■■□□□ 1.79
RCCD1-207ENST00000556774 ATP1B4Q9UN42 357 aaPredicted RBP26.23■■□□□ 1.79
RCCD1-207ENST00000556774 PLPPR3Q6T4P5 718 aa26.22■■□□□ 1.79
RCCD1-207ENST00000556774 LRRIQ1Q96JM4 1722 aa26.22■■□□□ 1.79
RCCD1-207ENST00000556774 MLECQ14165 292 aa26.18■■□□□ 1.78
RCCD1-207ENST00000556774 HSPA2P54652 639 aa26.16■■□□□ 1.78
RCCD1-207ENST00000556774 C9orf84Q5VXU9 1444 aa26.14■■□□□ 1.78
RCCD1-207ENST00000556774 ATP10AO60312 1499 aa26.14■■□□□ 1.78
RCCD1-207ENST00000556774 ARHGAP5Q13017 1502 aa26.14■■□□□ 1.77
RCCD1-207ENST00000556774 ARHGEF12Q9NZN5 1544 aa26.14■■□□□ 1.77
RCCD1-207ENST00000556774 TROQ12816 1431 aaPredicted RBP26.14■■□□□ 1.77
RCCD1-207ENST00000556774 EFCAB2Q5VUJ9 269 aa26.13■■□□□ 1.77
RCCD1-207ENST00000556774 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
RCCD1-207ENST00000556774 ZNF518AQ6AHZ1 1483 aa26.11■■□□□ 1.77
RCCD1-207ENST00000556774 CLIP1P30622 1438 aa26.1■■□□□ 1.77
RCCD1-207ENST00000556774 KDM5CP41229 1560 aa26.1■■□□□ 1.77
RCCD1-207ENST00000556774 CDC42BPBQ9Y5S2 1711 aa26.08■■□□□ 1.77
RCCD1-207ENST00000556774 PREX1Q8TCU6 1659 aa26.07■■□□□ 1.76
RCCD1-207ENST00000556774 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
RCCD1-207ENST00000556774 DIP2CQ9Y2E4 1556 aa26.05■■□□□ 1.76
RCCD1-207ENST00000556774 PREX2Q70Z35 1606 aa26.04■■□□□ 1.76
RCCD1-207ENST00000556774 ABCA6Q8N139 1617 aa26.02■■□□□ 1.76
RCCD1-207ENST00000556774 AFAP1Q8N556 730 aa26.01■■□□□ 1.75
RCCD1-207ENST00000556774 ITSN2Q9NZM3 1697 aa25.99■■□□□ 1.75
RCCD1-207ENST00000556774 ABCC1P33527 1531 aa25.99■■□□□ 1.75
RCCD1-207ENST00000556774 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
RCCD1-207ENST00000556774 REREQ9P2R6 1566 aa25.98■■□□□ 1.75
RCCD1-207ENST00000556774 CASKIN1Q8WXD9 1431 aa25.97■■□□□ 1.75
RCCD1-207ENST00000556774 CEBPAP49715 358 aaPredicted RBP25.96■■□□□ 1.75
RCCD1-207ENST00000556774 MYT1LQ9UL68 1186 aa25.96■■□□□ 1.75
RCCD1-207ENST00000556774 CDC42BPAQ5VT25 1732 aa25.96■■□□□ 1.75
RCCD1-207ENST00000556774 MLH3Q9UHC1 1453 aa25.93■■□□□ 1.74
RCCD1-207ENST00000556774 TRAPPC8Q9Y2L5 1435 aa25.93■■□□□ 1.74
RCCD1-207ENST00000556774 C3P01024 1663 aa25.92■■□□□ 1.74
RCCD1-207ENST00000556774 STRCQ7RTU9 1775 aa25.91■■□□□ 1.74
RCCD1-207ENST00000556774 KIDINS220Q9ULH0 1771 aa25.9■■□□□ 1.74
RCCD1-207ENST00000556774 FYCO1Q9BQS8 1478 aa25.88■■□□□ 1.73
RCCD1-207ENST00000556774 CERKQ8TCT0 537 aa25.88■■□□□ 1.73
RCCD1-207ENST00000556774 AGLP35573 1532 aa25.88■■□□□ 1.73
RCCD1-207ENST00000556774 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
RCCD1-207ENST00000556774 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
RCCD1-207ENST00000556774 SAMD9LQ8IVG5 1584 aa25.83■■□□□ 1.73
RCCD1-207ENST00000556774 SYCP2Q9BX26 1530 aa25.81■■□□□ 1.72
RCCD1-207ENST00000556774 GPATCH8Q9UKJ3 1502 aaKnown RBP25.75■■□□□ 1.71
RCCD1-207ENST00000556774 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
RCCD1-207ENST00000556774 ZNF777Q9ULD5 760 aaPredicted RBP25.75■■□□□ 1.71
RCCD1-207ENST00000556774 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
RCCD1-207ENST00000556774 MROH2AA6NES4 1674 aa25.74■■□□□ 1.71
RCCD1-207ENST00000556774 CNTLNQ9NXG0 1405 aa25.72■■□□□ 1.71
RCCD1-207ENST00000556774 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
RCCD1-207ENST00000556774 INO80Q9ULG1 1556 aaPredicted RBP25.71■■□□□ 1.71
RCCD1-207ENST00000556774 ATP7AQ04656 1500 aa25.71■■□□□ 1.71
RCCD1-207ENST00000556774 PTPRTO14522 1441 aa25.68■■□□□ 1.7
RCCD1-207ENST00000556774 SPAG9O60271 1321 aaKnown RBP25.67■■□□□ 1.7
RCCD1-207ENST00000556774 PLXNC1O60486 1568 aa25.67■■□□□ 1.7
RCCD1-207ENST00000556774 HNRNPMP52272 730 aaKnown RBP eCLIP25.67■■□□□ 1.78e-13■■■□□ 16.5
RCCD1-207ENST00000556774 CLTCQ00610 1675 aaKnown RBP25.67■■□□□ 1.7
RCCD1-207ENST00000556774 NCOA1Q15788 1441 aa25.65■■□□□ 1.7
RCCD1-207ENST00000556774 PLEKHH2Q8IVE3 1493 aa25.65■■□□□ 1.7
RCCD1-207ENST00000556774 CCNB3Q8WWL7 1395 aa25.64■■□□□ 1.69
RCCD1-207ENST00000556774 KIAA1107Q9UPP5 1409 aa25.63■■□□□ 1.69
RCCD1-207ENST00000556774 NPATQ14207 1427 aa25.63■■□□□ 1.69
RCCD1-207ENST00000556774 CAMSAP1Q5T5Y3 1602 aa25.62■■□□□ 1.69
RCCD1-207ENST00000556774 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
RCCD1-207ENST00000556774 A2MP01023 1474 aa25.61■■□□□ 1.69
RCCD1-207ENST00000556774 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
RCCD1-207ENST00000556774 CFDP1Q9UEE9 299 aaPredicted RBP25.61■■□□□ 1.69
RCCD1-207ENST00000556774 LTBP4Q8N2S1 1624 aa25.6■■□□□ 1.69
RCCD1-207ENST00000556774 MYO3AQ8NEV4 1616 aa25.6■■□□□ 1.69
RCCD1-207ENST00000556774 ZMYM3Q14202 1370 aa25.59■■□□□ 1.69
RCCD1-207ENST00000556774 ZNF142P52746 1687 aaPredicted RBP25.59■■□□□ 1.69
RCCD1-207ENST00000556774 ADGBQ8N7X0 1667 aa25.59■■□□□ 1.69
RCCD1-207ENST00000556774 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
RCCD1-207ENST00000556774 CEP170BQ9Y4F5 1589 aaPredicted RBP25.52■■□□□ 1.68
RCCD1-207ENST00000556774 PTPRKQ15262 1439 aa25.5■■□□□ 1.67
RCCD1-207ENST00000556774 ZNF644Q9H582 1327 aaPredicted RBP25.5■■□□□ 1.67
RCCD1-207ENST00000556774 IQSEC2Q5JU85 1478 aa25.49■■□□□ 1.67
RCCD1-207ENST00000556774 GGT6Q6P531 493 aa25.49■■□□□ 1.67
RCCD1-207ENST00000556774 MBD5Q9P267 1494 aa25.48■■□□□ 1.67
RCCD1-207ENST00000556774 DISP3Q9P2K9 1392 aa25.47■■□□□ 1.67
RCCD1-207ENST00000556774 NCKAP5LQ9HCH0 1330 aa25.47■■□□□ 1.67
RCCD1-207ENST00000556774 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
RCCD1-207ENST00000556774 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
RCCD1-207ENST00000556774 SPATA31D1Q6ZQQ2 1576 aa25.44■■□□□ 1.66
RCCD1-207ENST00000556774 TCOF1Q13428 1488 aaKnown RBP25.42■■□□□ 1.66
RCCD1-207ENST00000556774 ZNF335Q9H4Z2 1342 aaPredicted RBP25.41■■□□□ 1.66
RCCD1-207ENST00000556774 RTEL1-TNFRSF6BF6WH68 1400 aa25.41■■□□□ 1.66
RCCD1-207ENST00000556774 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
RCCD1-207ENST00000556774 CCDC141Q6ZP82 1450 aa25.39■■□□□ 1.65
RCCD1-207ENST00000556774 NCOA2Q15596 1464 aa25.38■■□□□ 1.65
RCCD1-207ENST00000556774 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
RCCD1-207ENST00000556774 A2ML1A8K2U0 1454 aa25.37■■□□□ 1.65
RCCD1-207ENST00000556774 DHX29Q7Z478 1369 aaKnown RBP25.37■■□□□ 1.65
RCCD1-207ENST00000556774 ILDR2Q71H61 639 aa25.37■■□□□ 1.65
RCCD1-207ENST00000556774 PPP6R1Q9UPN7 881 aa25.37■■□□□ 1.65
RCCD1-207ENST00000556774 PKD2Q13563 968 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms