RNA–Protein interactions for RNA: ENST00000556761.1

ZFYVE1-209, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 4

Gene ZFYVE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-209ENST00000556761 ARHGEF40Q8TER5 1519 aa30.75■■■□□ 2.51
ZFYVE1-209ENST00000556761 MAGI2Q86UL8 1455 aa30.71■■■□□ 2.51
ZFYVE1-209ENST00000556761 ARHGAP5Q13017 1502 aa30.7■■■□□ 2.51
ZFYVE1-209ENST00000556761 CDC42BPBQ9Y5S2 1711 aa30.7■■■□□ 2.5
ZFYVE1-209ENST00000556761 LOC105371045A0A1W2PR82 267 aa30.69■■■□□ 2.5
ZFYVE1-209ENST00000556761 YEATS2Q9ULM3 1422 aa30.68■■■□□ 2.5
ZFYVE1-209ENST00000556761 ADAMTSL3P82987 1691 aa30.67■■■□□ 2.5
ZFYVE1-209ENST00000556761 PREX2Q70Z35 1606 aa30.66■■■□□ 2.5
ZFYVE1-209ENST00000556761 ZFYVE16Q7Z3T8 1539 aa30.66■■■□□ 2.5
ZFYVE1-209ENST00000556761 BCORL1Q5H9F3 1711 aa30.62■■■□□ 2.49
ZFYVE1-209ENST00000556761 CDC42BPAQ5VT25 1732 aa30.61■■■□□ 2.49
ZFYVE1-209ENST00000556761 ZNF518AQ6AHZ1 1483 aa30.6■■■□□ 2.49
ZFYVE1-209ENST00000556761 KDM5CP41229 1560 aa30.58■■■□□ 2.49
ZFYVE1-209ENST00000556761 AFAP1Q8N556 730 aa30.58■■■□□ 2.49
ZFYVE1-209ENST00000556761 SIGLEC1Q9BZZ2 1709 aa30.58■■■□□ 2.49
ZFYVE1-209ENST00000556761 ARHGEF12Q9NZN5 1544 aa30.57■■■□□ 2.49
ZFYVE1-209ENST00000556761 GPATCH8Q9UKJ3 1502 aaKnown RBP30.57■■■□□ 2.49
ZFYVE1-209ENST00000556761 ARID4BQ4LE39 1312 aaPredicted RBP30.57■■■□□ 2.48
ZFYVE1-209ENST00000556761 ABCC1P33527 1531 aa30.57■■■□□ 2.48
ZFYVE1-209ENST00000556761 ATP10AO60312 1499 aa30.54■■■□□ 2.48
ZFYVE1-209ENST00000556761 PTPRMP28827 1452 aa30.53■■■□□ 2.48
ZFYVE1-209ENST00000556761 MTUS2Q5JR59 1369 aa30.53■■■□□ 2.48
ZFYVE1-209ENST00000556761 TRAPPC8Q9Y2L5 1435 aa30.52■■■□□ 2.48
ZFYVE1-209ENST00000556761 MADDQ8WXG6 1647 aa30.51■■■□□ 2.47
ZFYVE1-209ENST00000556761 MLH3Q9UHC1 1453 aa30.49■■■□□ 2.47
ZFYVE1-209ENST00000556761 ITSN2Q9NZM3 1697 aa30.49■■■□□ 2.47
ZFYVE1-209ENST00000556761 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
ZFYVE1-209ENST00000556761 SAMD9LQ8IVG5 1584 aa30.47■■■□□ 2.47
ZFYVE1-209ENST00000556761 EHBP1L1Q8N3D4 1523 aa30.47■■■□□ 2.47
ZFYVE1-209ENST00000556761 HECW2Q9P2P5 1572 aa30.45■■■□□ 2.47
ZFYVE1-209ENST00000556761 CCNB3Q8WWL7 1395 aa30.45■■■□□ 2.47
ZFYVE1-209ENST00000556761 VPS8Q8N3P4 1428 aa30.45■■■□□ 2.46
ZFYVE1-209ENST00000556761 DIP2CQ9Y2E4 1556 aa30.42■■■□□ 2.46
ZFYVE1-209ENST00000556761 CFDP1Q9UEE9 299 aaPredicted RBP30.41■■■□□ 2.46
ZFYVE1-209ENST00000556761 ZNF777Q9ULD5 760 aaPredicted RBP30.41■■■□□ 2.46
ZFYVE1-209ENST00000556761 KIAA1107Q9UPP5 1409 aa30.4■■■□□ 2.46
ZFYVE1-209ENST00000556761 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
ZFYVE1-209ENST00000556761 REREQ9P2R6 1566 aa30.39■■■□□ 2.46
ZFYVE1-209ENST00000556761 ABCA6Q8N139 1617 aa30.39■■■□□ 2.46
ZFYVE1-209ENST00000556761 SYCP2Q9BX26 1530 aa30.38■■■□□ 2.45
ZFYVE1-209ENST00000556761 RIMS1Q86UR5 1692 aaKnown RBP30.37■■■□□ 2.45
ZFYVE1-209ENST00000556761 HNRNPMP52272 730 aaKnown RBP eCLIP30.36■■■□□ 2.45
ZFYVE1-209ENST00000556761 PLEKHH2Q8IVE3 1493 aa30.36■■■□□ 2.45
ZFYVE1-209ENST00000556761 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
ZFYVE1-209ENST00000556761 MLECQ14165 292 aa30.34■■■□□ 2.45
ZFYVE1-209ENST00000556761 MYT1LQ9UL68 1186 aa30.32■■■□□ 2.44
ZFYVE1-209ENST00000556761 NCOA2Q15596 1464 aa30.31■■■□□ 2.44
ZFYVE1-209ENST00000556761 ZNF644Q9H582 1327 aaPredicted RBP30.3■■■□□ 2.44
ZFYVE1-209ENST00000556761 AGLP35573 1532 aa30.3■■■□□ 2.44
ZFYVE1-209ENST00000556761 MAP3K1Q13233 1512 aa30.28■■■□□ 2.44
ZFYVE1-209ENST00000556761 FER1L4A9Z1Z3 1794 aa30.28■■■□□ 2.44
ZFYVE1-209ENST00000556761 SUPT6HQ7KZ85 1726 aaKnown RBP30.27■■■□□ 2.44
ZFYVE1-209ENST00000556761 SPAG9O60271 1321 aaKnown RBP30.27■■■□□ 2.44
ZFYVE1-209ENST00000556761 LRRC9Q6ZRR7 1453 aa30.27■■■□□ 2.44
ZFYVE1-209ENST00000556761 MBD5Q9P267 1494 aa30.27■■■□□ 2.44
ZFYVE1-209ENST00000556761 INO80Q9ULG1 1556 aaPredicted RBP30.22■■■□□ 2.43
ZFYVE1-209ENST00000556761 ATP7AQ04656 1500 aa30.21■■■□□ 2.43
ZFYVE1-209ENST00000556761 KANK4Q5T7N3 995 aaPredicted RBP30.2■■■□□ 2.43
ZFYVE1-209ENST00000556761 LMTK3Q96Q04 1460 aa30.19■■■□□ 2.42
ZFYVE1-209ENST00000556761 CAMSAP2Q08AD1 1489 aa30.13■■■□□ 2.41
ZFYVE1-209ENST00000556761 PLXNC1O60486 1568 aa30.13■■■□□ 2.41
ZFYVE1-209ENST00000556761 PLPPR3Q6T4P5 718 aa30.12■■■□□ 2.41
ZFYVE1-209ENST00000556761 RTEL1-TNFRSF6BF6WH68 1400 aa30.12■■■□□ 2.41
ZFYVE1-209ENST00000556761 CEBPAP49715 358 aaPredicted RBP30.11■■■□□ 2.41
ZFYVE1-209ENST00000556761 A2MP01023 1474 aa30.11■■■□□ 2.41
ZFYVE1-209ENST00000556761 RSPH4AQ5TD94 716 aa30.08■■■□□ 2.41
ZFYVE1-209ENST00000556761 CCDC141Q6ZP82 1450 aa30.07■■■□□ 2.4
ZFYVE1-209ENST00000556761 ARHGEF5Q12774 1597 aa30.04■■■□□ 2.4
ZFYVE1-209ENST00000556761 ADGBQ8N7X0 1667 aa30.04■■■□□ 2.4
ZFYVE1-209ENST00000556761 CNTLNQ9NXG0 1405 aa30.03■■■□□ 2.4
ZFYVE1-209ENST00000556761 MYOM3Q5VTT5 1437 aa30.02■■■□□ 2.4
ZFYVE1-209ENST00000556761 C3P01024 1663 aa30.01■■■□□ 2.4
ZFYVE1-209ENST00000556761 MIA2Q96PC5 1412 aa30.01■■■□□ 2.39
ZFYVE1-209ENST00000556761 HSPA2P54652 639 aa30■■■□□ 2.39
ZFYVE1-209ENST00000556761 DHX29Q7Z478 1369 aaKnown RBP30■■■□□ 2.39
ZFYVE1-209ENST00000556761 SETD1BQ9UPS6 1966 aaKnown RBP29.99■■■□□ 2.39
ZFYVE1-209ENST00000556761 ESF1Q9H501 851 aaKnown RBP29.98■■■□□ 2.39
ZFYVE1-209ENST00000556761 PREX1Q8TCU6 1659 aa29.97■■■□□ 2.39
ZFYVE1-209ENST00000556761 APLP2Q06481 763 aa29.95■■■□□ 2.39
ZFYVE1-209ENST00000556761 MROH2AA6NES4 1674 aa29.94■■■□□ 2.38
ZFYVE1-209ENST00000556761 PPP6R1Q9UPN7 881 aa29.92■■■□□ 2.38
ZFYVE1-209ENST00000556761 ZMYM3Q14202 1370 aa29.91■■■□□ 2.38
ZFYVE1-209ENST00000556761 TSPY4P0CV99 314 aa29.91■■■□□ 2.38
ZFYVE1-209ENST00000556761 TSPY10P0CW01 314 aa29.91■■■□□ 2.38
ZFYVE1-209ENST00000556761 GGT6Q6P531 493 aa29.9■■■□□ 2.38
ZFYVE1-209ENST00000556761 MAST1Q9Y2H9 1570 aa29.9■■■□□ 2.38
ZFYVE1-209ENST00000556761 UHRF1BP1Q6BDS2 1440 aa29.88■■■□□ 2.37
ZFYVE1-209ENST00000556761 CLTCQ00610 1675 aaKnown RBP29.87■■■□□ 2.37
ZFYVE1-209ENST00000556761 NPATQ14207 1427 aa29.87■■■□□ 2.37
ZFYVE1-209ENST00000556761 KIF3BO15066 747 aa29.83■■■□□ 2.37
ZFYVE1-209ENST00000556761 PTPRKQ15262 1439 aa29.8■■■□□ 2.36
ZFYVE1-209ENST00000556761 FGD6Q6ZV73 1430 aa29.8■■■□□ 2.36
ZFYVE1-209ENST00000556761 PTPN23Q9H3S7 1636 aa29.8■■■□□ 2.36
ZFYVE1-209ENST00000556761 TCOF1Q13428 1488 aaKnown RBP29.8■■■□□ 2.36
ZFYVE1-209ENST00000556761 ABCC5O15440 1437 aa29.78■■■□□ 2.36
ZFYVE1-209ENST00000556761 FAM135AQ9P2D6 1515 aa29.76■■■□□ 2.36
ZFYVE1-209ENST00000556761 ILDR1Q86SU0 546 aaPredicted RBP29.76■■■□□ 2.35
ZFYVE1-209ENST00000556761 STRCQ7RTU9 1775 aa29.75■■■□□ 2.35
ZFYVE1-209ENST00000556761 SHANK2Q9UPX8 1470 aa29.74■■■□□ 2.35
ZFYVE1-209ENST00000556761 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms