RNA–Protein interactions for RNA: ENST00000556500.1

KLHL28-205, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-205ENST00000556500 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
KLHL28-205ENST00000556500 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
KLHL28-205ENST00000556500 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
KLHL28-205ENST00000556500 PREX2Q70Z35 1606 aa16.35■□□□□ 0.21
KLHL28-205ENST00000556500 VPS8Q8N3P4 1428 aa16.33■□□□□ 0.2
KLHL28-205ENST00000556500 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
KLHL28-205ENST00000556500 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
KLHL28-205ENST00000556500 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
KLHL28-205ENST00000556500 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
KLHL28-205ENST00000556500 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
KLHL28-205ENST00000556500 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
KLHL28-205ENST00000556500 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
KLHL28-205ENST00000556500 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
KLHL28-205ENST00000556500 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
KLHL28-205ENST00000556500 ZMYM4Q5VZL5 1548 aa16.28■□□□□ 0.2
KLHL28-205ENST00000556500 ZFYVE16Q7Z3T8 1539 aa16.28■□□□□ 0.2
KLHL28-205ENST00000556500 GPATCH8Q9UKJ3 1502 aaKnown RBP16.28■□□□□ 0.2
KLHL28-205ENST00000556500 CCNB3Q8WWL7 1395 aa16.27■□□□□ 0.2
KLHL28-205ENST00000556500 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
KLHL28-205ENST00000556500 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
KLHL28-205ENST00000556500 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
KLHL28-205ENST00000556500 SIGLEC1Q9BZZ2 1709 aa16.25■□□□□ 0.19
KLHL28-205ENST00000556500 ABCC1P33527 1531 aa16.25■□□□□ 0.19
KLHL28-205ENST00000556500 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
KLHL28-205ENST00000556500 TRAPPC8Q9Y2L5 1435 aa16.25■□□□□ 0.19
KLHL28-205ENST00000556500 ZNF518AQ6AHZ1 1483 aa16.23■□□□□ 0.19
KLHL28-205ENST00000556500 SUPT6HQ7KZ85 1726 aaKnown RBP16.23■□□□□ 0.19
KLHL28-205ENST00000556500 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
KLHL28-205ENST00000556500 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
KLHL28-205ENST00000556500 BCORL1Q5H9F3 1711 aa16.22■□□□□ 0.19
KLHL28-205ENST00000556500 MLECQ14165 292 aa16.21■□□□□ 0.19
KLHL28-205ENST00000556500 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
KLHL28-205ENST00000556500 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
KLHL28-205ENST00000556500 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.19
KLHL28-205ENST00000556500 KDM5CP41229 1560 aa16.21■□□□□ 0.18
KLHL28-205ENST00000556500 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.18
KLHL28-205ENST00000556500 ZNF644Q9H582 1327 aaPredicted RBP16.2■□□□□ 0.18
KLHL28-205ENST00000556500 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
KLHL28-205ENST00000556500 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
KLHL28-205ENST00000556500 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
KLHL28-205ENST00000556500 ATP10AO60312 1499 aa16.17■□□□□ 0.18
KLHL28-205ENST00000556500 ABCA6Q8N139 1617 aa16.17■□□□□ 0.18
KLHL28-205ENST00000556500 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
KLHL28-205ENST00000556500 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
KLHL28-205ENST00000556500 KIDINS220Q9ULH0 1771 aa16.16■□□□□ 0.18
KLHL28-205ENST00000556500 RIMS1Q86UR5 1692 aaKnown RBP16.16■□□□□ 0.18
KLHL28-205ENST00000556500 APLP2Q06481 763 aa16.16■□□□□ 0.18
KLHL28-205ENST00000556500 C9orf84Q5VXU9 1444 aa16.15■□□□□ 0.18
KLHL28-205ENST00000556500 MLH3Q9UHC1 1453 aa16.14■□□□□ 0.17
KLHL28-205ENST00000556500 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
KLHL28-205ENST00000556500 PLEKHH2Q8IVE3 1493 aa16.13■□□□□ 0.17
KLHL28-205ENST00000556500 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
KLHL28-205ENST00000556500 PTPRMP28827 1452 aa16.12■□□□□ 0.17
KLHL28-205ENST00000556500 KIAA1107Q9UPP5 1409 aa16.11■□□□□ 0.17
KLHL28-205ENST00000556500 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
KLHL28-205ENST00000556500 FER1L4A9Z1Z3 1794 aa16.11■□□□□ 0.17
KLHL28-205ENST00000556500 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
KLHL28-205ENST00000556500 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
KLHL28-205ENST00000556500 MBD5Q9P267 1494 aa16.08■□□□□ 0.16
KLHL28-205ENST00000556500 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
KLHL28-205ENST00000556500 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
KLHL28-205ENST00000556500 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
KLHL28-205ENST00000556500 CEBPAP49715 358 aaPredicted RBP16.02■□□□□ 0.16
KLHL28-205ENST00000556500 AGLP35573 1532 aa16.01■□□□□ 0.15
KLHL28-205ENST00000556500 A2MP01023 1474 aa16.01■□□□□ 0.15
KLHL28-205ENST00000556500 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
KLHL28-205ENST00000556500 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
KLHL28-205ENST00000556500 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
KLHL28-205ENST00000556500 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
KLHL28-205ENST00000556500 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
KLHL28-205ENST00000556500 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
KLHL28-205ENST00000556500 PLXNC1O60486 1568 aa15.97■□□□□ 0.15
KLHL28-205ENST00000556500 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
KLHL28-205ENST00000556500 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
KLHL28-205ENST00000556500 GGT6Q6P531 493 aa15.97■□□□□ 0.15
KLHL28-205ENST00000556500 RTEL1-TNFRSF6BF6WH68 1400 aa15.96■□□□□ 0.15
KLHL28-205ENST00000556500 RSPH4AQ5TD94 716 aa15.96■□□□□ 0.15
KLHL28-205ENST00000556500 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
KLHL28-205ENST00000556500 C3P01024 1663 aa15.95■□□□□ 0.14
KLHL28-205ENST00000556500 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
KLHL28-205ENST00000556500 LMTK3Q96Q04 1460 aa15.92■□□□□ 0.14
KLHL28-205ENST00000556500 DHX29Q7Z478 1369 aaKnown RBP15.92■□□□□ 0.14
KLHL28-205ENST00000556500 KIF3BO15066 747 aa15.92■□□□□ 0.14
KLHL28-205ENST00000556500 HSPA2P54652 639 aa15.92■□□□□ 0.14
KLHL28-205ENST00000556500 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
KLHL28-205ENST00000556500 CROCC2H7BZ55 1655 aa15.91■□□□□ 0.14
KLHL28-205ENST00000556500 MAST1Q9Y2H9 1570 aa15.91■□□□□ 0.14
KLHL28-205ENST00000556500 ABCC5O15440 1437 aa15.9■□□□□ 0.14
KLHL28-205ENST00000556500 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
KLHL28-205ENST00000556500 DNMT1P26358 1616 aaKnown RBP15.89■□□□□ 0.13
KLHL28-205ENST00000556500 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
KLHL28-205ENST00000556500 DAPK1P53355 1430 aa15.88■□□□□ 0.13
KLHL28-205ENST00000556500 PREX1Q8TCU6 1659 aa15.88■□□□□ 0.13
KLHL28-205ENST00000556500 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
KLHL28-205ENST00000556500 MROH2AA6NES4 1674 aa15.87■□□□□ 0.13
KLHL28-205ENST00000556500 SETD1BQ9UPS6 1966 aaKnown RBP15.87■□□□□ 0.13
KLHL28-205ENST00000556500 ZMYM3Q14202 1370 aa15.87■□□□□ 0.13
KLHL28-205ENST00000556500 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
KLHL28-205ENST00000556500 SHANK2Q9UPX8 1470 aa15.84■□□□□ 0.13
KLHL28-205ENST00000556500 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms