RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 CDK11AQ9UQ88 783 aaPredicted RBP14.74□□□□□ -0.05
LINC00520-204ENST00000556417 ZFYVE16Q7Z3T8 1539 aa14.74□□□□□ -0.05
LINC00520-204ENST00000556417 POGZQ7Z3K3 1410 aa14.74□□□□□ -0.05
LINC00520-204ENST00000556417 PCF11O94913 1555 aaKnown RBP14.73□□□□□ -0.05
LINC00520-204ENST00000556417 FBXO41Q8TF61 875 aa14.73□□□□□ -0.05
LINC00520-204ENST00000556417 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
LINC00520-204ENST00000556417 MLECQ14165 292 aa14.72□□□□□ -0.05
LINC00520-204ENST00000556417 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
LINC00520-204ENST00000556417 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
LINC00520-204ENST00000556417 RIMS1Q86UR5 1692 aaKnown RBP14.71□□□□□ -0.06
LINC00520-204ENST00000556417 HSPA2P54652 639 aa14.7□□□□□ -0.06
LINC00520-204ENST00000556417 TROQ12816 1431 aaPredicted RBP14.69□□□□□ -0.06
LINC00520-204ENST00000556417 ATP10AO60312 1499 aa14.69□□□□□ -0.06
LINC00520-204ENST00000556417 AFAP1Q8N556 730 aa14.68□□□□□ -0.06
LINC00520-204ENST00000556417 KIF14Q15058 1648 aa14.67□□□□□ -0.06
LINC00520-204ENST00000556417 C9orf84Q5VXU9 1444 aa14.66□□□□□ -0.06
LINC00520-204ENST00000556417 ZNF518AQ6AHZ1 1483 aa14.64□□□□□ -0.07
LINC00520-204ENST00000556417 CLIP1P30622 1438 aa14.64□□□□□ -0.07
LINC00520-204ENST00000556417 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
LINC00520-204ENST00000556417 ARHGAP5Q13017 1502 aa14.63□□□□□ -0.07
LINC00520-204ENST00000556417 ARHGEF12Q9NZN5 1544 aa14.63□□□□□ -0.07
LINC00520-204ENST00000556417 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
LINC00520-204ENST00000556417 KDM5CP41229 1560 aa14.61□□□□□ -0.07
LINC00520-204ENST00000556417 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
LINC00520-204ENST00000556417 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
LINC00520-204ENST00000556417 MYT1LQ9UL68 1186 aa14.59□□□□□ -0.07
LINC00520-204ENST00000556417 FER1L4A9Z1Z3 1794 aa14.59□□□□□ -0.07
LINC00520-204ENST00000556417 MLH3Q9UHC1 1453 aa14.58□□□□□ -0.08
LINC00520-204ENST00000556417 TRAPPC8Q9Y2L5 1435 aa14.58□□□□□ -0.08
LINC00520-204ENST00000556417 CCDC18Q5T9S5 1454 aa14.57□□□□□ -0.08
LINC00520-204ENST00000556417 CDC42BPBQ9Y5S2 1711 aa14.56□□□□□ -0.08
LINC00520-204ENST00000556417 DIP2CQ9Y2E4 1556 aa14.56□□□□□ -0.08
LINC00520-204ENST00000556417 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
LINC00520-204ENST00000556417 ABCC1P33527 1531 aa14.54□□□□□ -0.08
LINC00520-204ENST00000556417 REREQ9P2R6 1566 aa14.54□□□□□ -0.08
LINC00520-204ENST00000556417 PREX2Q70Z35 1606 aa14.53□□□□□ -0.08
LINC00520-204ENST00000556417 ABCA6Q8N139 1617 aa14.52□□□□□ -0.08
LINC00520-204ENST00000556417 FYCO1Q9BQS8 1478 aa14.51□□□□□ -0.09
LINC00520-204ENST00000556417 ZNF777Q9ULD5 760 aaPredicted RBP14.51□□□□□ -0.09
LINC00520-204ENST00000556417 AGLP35573 1532 aa14.51□□□□□ -0.09
LINC00520-204ENST00000556417 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
LINC00520-204ENST00000556417 PREX1Q8TCU6 1659 aa14.5□□□□□ -0.09
LINC00520-204ENST00000556417 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
LINC00520-204ENST00000556417 HNRNPMP52272 730 aaKnown RBP eCLIP14.49□□□□□ -0.09
LINC00520-204ENST00000556417 ESF1Q9H501 851 aaKnown RBP14.49□□□□□ -0.09
LINC00520-204ENST00000556417 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
LINC00520-204ENST00000556417 ITSN2Q9NZM3 1697 aa14.48□□□□□ -0.09
LINC00520-204ENST00000556417 KIDINS220Q9ULH0 1771 aa14.47□□□□□ -0.09
LINC00520-204ENST00000556417 CDC42BPAQ5VT25 1732 aa14.47□□□□□ -0.09
LINC00520-204ENST00000556417 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.09
LINC00520-204ENST00000556417 SPAG9O60271 1321 aaKnown RBP14.45□□□□□ -0.1
LINC00520-204ENST00000556417 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
LINC00520-204ENST00000556417 C3P01024 1663 aa14.45□□□□□ -0.1
LINC00520-204ENST00000556417 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
LINC00520-204ENST00000556417 CNTLNQ9NXG0 1405 aa14.44□□□□□ -0.1
LINC00520-204ENST00000556417 KIAA1107Q9UPP5 1409 aa14.44□□□□□ -0.1
LINC00520-204ENST00000556417 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
LINC00520-204ENST00000556417 ZMYM3Q14202 1370 aa14.42□□□□□ -0.1
LINC00520-204ENST00000556417 CCNB3Q8WWL7 1395 aa14.42□□□□□ -0.1
LINC00520-204ENST00000556417 PTPRTO14522 1441 aa14.41□□□□□ -0.1
LINC00520-204ENST00000556417 MTUS2Q5JR59 1369 aa14.41□□□□□ -0.1
LINC00520-204ENST00000556417 SETD1BQ9UPS6 1966 aaKnown RBP14.41□□□□□ -0.1
LINC00520-204ENST00000556417 ZNF644Q9H582 1327 aaPredicted RBP14.4□□□□□ -0.1
LINC00520-204ENST00000556417 PLEKHH2Q8IVE3 1493 aa14.39□□□□□ -0.11
LINC00520-204ENST00000556417 NPATQ14207 1427 aa14.39□□□□□ -0.11
LINC00520-204ENST00000556417 ATP7AQ04656 1500 aa14.38□□□□□ -0.11
LINC00520-204ENST00000556417 A2MP01023 1474 aa14.38□□□□□ -0.11
LINC00520-204ENST00000556417 GGT6Q6P531 493 aa14.37□□□□□ -0.11
LINC00520-204ENST00000556417 NCOA1Q15788 1441 aa14.37□□□□□ -0.11
LINC00520-204ENST00000556417 PLXNC1O60486 1568 aa14.36□□□□□ -0.11
LINC00520-204ENST00000556417 INO80Q9ULG1 1556 aaPredicted RBP14.36□□□□□ -0.11
LINC00520-204ENST00000556417 MBD5Q9P267 1494 aa14.36□□□□□ -0.11
LINC00520-204ENST00000556417 MROH2AA6NES4 1674 aa14.34□□□□□ -0.11
LINC00520-204ENST00000556417 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
LINC00520-204ENST00000556417 SUPT6HQ7KZ85 1726 aaKnown RBP14.34□□□□□ -0.11
LINC00520-204ENST00000556417 LTBP4Q8N2S1 1624 aa14.33□□□□□ -0.11
LINC00520-204ENST00000556417 TIAM1Q13009 1591 aa14.33□□□□□ -0.12
LINC00520-204ENST00000556417 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
LINC00520-204ENST00000556417 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.12
LINC00520-204ENST00000556417 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
LINC00520-204ENST00000556417 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
LINC00520-204ENST00000556417 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
LINC00520-204ENST00000556417 EHBP1L1Q8N3D4 1523 aa14.31□□□□□ -0.12
LINC00520-204ENST00000556417 DHX29Q7Z478 1369 aaKnown RBP14.31□□□□□ -0.12
LINC00520-204ENST00000556417 CLTCQ00610 1675 aaKnown RBP14.3□□□□□ -0.12
LINC00520-204ENST00000556417 PKD2Q13563 968 aa14.29□□□□□ -0.12
LINC00520-204ENST00000556417 PLA2R1Q13018 1463 aa14.27□□□□□ -0.12
LINC00520-204ENST00000556417 IQSEC2Q5JU85 1478 aa14.27□□□□□ -0.12
LINC00520-204ENST00000556417 ZNF335Q9H4Z2 1342 aaPredicted RBP14.27□□□□□ -0.12
LINC00520-204ENST00000556417 FOXD1Q16676 465 aa14.27□□□□□ -0.13
LINC00520-204ENST00000556417 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.13
LINC00520-204ENST00000556417 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
LINC00520-204ENST00000556417 NCOA2Q15596 1464 aa14.26□□□□□ -0.13
LINC00520-204ENST00000556417 KIF3BO15066 747 aa14.26□□□□□ -0.13
LINC00520-204ENST00000556417 ADGBQ8N7X0 1667 aa14.26□□□□□ -0.13
LINC00520-204ENST00000556417 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
LINC00520-204ENST00000556417 CEP170BQ9Y4F5 1589 aaPredicted RBP14.26□□□□□ -0.13
LINC00520-204ENST00000556417 DISP3Q9P2K9 1392 aa14.25□□□□□ -0.13
LINC00520-204ENST00000556417 FBXO31Q5XUX0 539 aaPredicted RBP14.25□□□□□ -0.13
LINC00520-204ENST00000556417 ILDR2Q71H61 639 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms