RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 KRTAP3-3Q9BYR6 98 aa11.2□□□□□ -0.62
HIF1A-208ENST00000556237 KRTAP3-2Q9BYR7 98 aa11.2□□□□□ -0.62
HIF1A-208ENST00000556237 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-208ENST00000556237 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-208ENST00000556237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-208ENST00000556237 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
HIF1A-208ENST00000556237 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-208ENST00000556237 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
HIF1A-208ENST00000556237 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
HIF1A-208ENST00000556237 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
HIF1A-208ENST00000556237 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
HIF1A-208ENST00000556237 ERBB3P21860 1342 aa11.12□□□□□ -0.63
HIF1A-208ENST00000556237 PHF8Q9UPP1 1060 aa11.12□□□□□ -0.63
HIF1A-208ENST00000556237 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
HIF1A-208ENST00000556237 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
HIF1A-208ENST00000556237 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
HIF1A-208ENST00000556237 RSF1Q96T23 1441 aaPredicted RBP11.08□□□□□ -0.64
HIF1A-208ENST00000556237 NLRP6P59044 892 aa11.06□□□□□ -0.64
HIF1A-208ENST00000556237 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
HIF1A-208ENST00000556237 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
HIF1A-208ENST00000556237 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
HIF1A-208ENST00000556237 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
HIF1A-208ENST00000556237 PKD2Q13563 968 aa11.02□□□□□ -0.65
HIF1A-208ENST00000556237 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
HIF1A-208ENST00000556237 FBXO22Q8NEZ5 403 aa11.01□□□□□ -0.65
HIF1A-208ENST00000556237 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
HIF1A-208ENST00000556237 BAZ1AQ9NRL2 1556 aaPredicted RBP11□□□□□ -0.65
HIF1A-208ENST00000556237 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
HIF1A-208ENST00000556237 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
HIF1A-208ENST00000556237 STK25O00506 426 aa10.96□□□□□ -0.65
HIF1A-208ENST00000556237 MFRPQ9BY79 579 aa10.96□□□□□ -0.65
HIF1A-208ENST00000556237 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
HIF1A-208ENST00000556237 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-208ENST00000556237 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
HIF1A-208ENST00000556237 RNF166Q96A37 237 aaPredicted RBP10.92□□□□□ -0.66
HIF1A-208ENST00000556237 WIZO95785 1651 aa10.92□□□□□ -0.66
HIF1A-208ENST00000556237 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
HIF1A-208ENST00000556237 KIF3CO14782 793 aa10.89□□□□□ -0.67
HIF1A-208ENST00000556237 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
HIF1A-208ENST00000556237 C2orf72A6NCS6 295 aa10.88□□□□□ -0.67
HIF1A-208ENST00000556237 KHSRPQ92945 711 aaKnown RBP eCLIP10.88□□□□□ -0.67
HIF1A-208ENST00000556237 RGL2O15211 777 aa10.86□□□□□ -0.67
HIF1A-208ENST00000556237 PTGER2P43116 358 aa10.86□□□□□ -0.67
HIF1A-208ENST00000556237 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
HIF1A-208ENST00000556237 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
HIF1A-208ENST00000556237 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
HIF1A-208ENST00000556237 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
HIF1A-208ENST00000556237 NUDT7P0C024 238 aa10.81□□□□□ -0.68
HIF1A-208ENST00000556237 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
HIF1A-208ENST00000556237 SLC34A2O95436 690 aa10.8□□□□□ -0.68
HIF1A-208ENST00000556237 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
HIF1A-208ENST00000556237 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
HIF1A-208ENST00000556237 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
HIF1A-208ENST00000556237 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
HIF1A-208ENST00000556237 PBX2P40425 430 aa10.78□□□□□ -0.68
HIF1A-208ENST00000556237 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
HIF1A-208ENST00000556237 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
HIF1A-208ENST00000556237 LHX6Q9UPM6 363 aa10.76□□□□□ -0.69
HIF1A-208ENST00000556237 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
HIF1A-208ENST00000556237 PPP1R37O75864 691 aa10.74□□□□□ -0.69
HIF1A-208ENST00000556237 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
HIF1A-208ENST00000556237 POTEEQ6S8J3 1075 aa10.69□□□□□ -0.7
HIF1A-208ENST00000556237 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
HIF1A-208ENST00000556237 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
HIF1A-208ENST00000556237 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
HIF1A-208ENST00000556237 HS6ST3Q8IZP7 471 aa10.66□□□□□ -0.7
HIF1A-208ENST00000556237 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
HIF1A-208ENST00000556237 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
HIF1A-208ENST00000556237 FOXK1P85037 733 aa10.64□□□□□ -0.71
HIF1A-208ENST00000556237 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
HIF1A-208ENST00000556237 PLPP6Q8IY26 295 aa10.62□□□□□ -0.71
HIF1A-208ENST00000556237 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
HIF1A-208ENST00000556237 ADGRD1Q6QNK2 874 aa10.61□□□□□ -0.71
HIF1A-208ENST00000556237 TBC1D12O60347 775 aa10.58□□□□□ -0.72
HIF1A-208ENST00000556237 DSG2Q14126 1118 aa10.58□□□□□ -0.72
HIF1A-208ENST00000556237 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
HIF1A-208ENST00000556237 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
HIF1A-208ENST00000556237 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
HIF1A-208ENST00000556237 TK2O00142 265 aa10.56□□□□□ -0.72
HIF1A-208ENST00000556237 PSEN2P49810 448 aa10.54□□□□□ -0.72
HIF1A-208ENST00000556237 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
HIF1A-208ENST00000556237 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.72
HIF1A-208ENST00000556237 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
HIF1A-208ENST00000556237 HRO43593 1189 aa10.51□□□□□ -0.73
HIF1A-208ENST00000556237 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
HIF1A-208ENST00000556237 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
HIF1A-208ENST00000556237 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
HIF1A-208ENST00000556237 CFTRP13569 1480 aa10.49□□□□□ -0.73
HIF1A-208ENST00000556237 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
HIF1A-208ENST00000556237 OXER1Q8TDS5 423 aa10.48□□□□□ -0.73
HIF1A-208ENST00000556237 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
HIF1A-208ENST00000556237 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
HIF1A-208ENST00000556237 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
HIF1A-208ENST00000556237 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
HIF1A-208ENST00000556237 ABCC8Q09428 1581 aa10.45□□□□□ -0.74
HIF1A-208ENST00000556237 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
HIF1A-208ENST00000556237 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
HIF1A-208ENST00000556237 KCTD12Q96CX2 325 aaKnown RBP10.43□□□□□ -0.74
HIF1A-208ENST00000556237 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
HIF1A-208ENST00000556237 FAM9AQ8IZU1 332 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms