RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
HNRNPC-224ENST00000556226 KIF14Q15058 1648 aa16.08■□□□□ 0.17
HNRNPC-224ENST00000556226 FBXO41Q8TF61 875 aa16.07■□□□□ 0.16
HNRNPC-224ENST00000556226 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
HNRNPC-224ENST00000556226 MYO5CQ9NQX4 1742 aa16.06■□□□□ 0.16
HNRNPC-224ENST00000556226 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
HNRNPC-224ENST00000556226 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
HNRNPC-224ENST00000556226 HSPA2P54652 639 aa16.05■□□□□ 0.16
HNRNPC-224ENST00000556226 MLECQ14165 292 aa16.05■□□□□ 0.16
HNRNPC-224ENST00000556226 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
HNRNPC-224ENST00000556226 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
HNRNPC-224ENST00000556226 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
HNRNPC-224ENST00000556226 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
HNRNPC-224ENST00000556226 EFCAB2Q5VUJ9 269 aa16.01■□□□□ 0.15
HNRNPC-224ENST00000556226 ATP10AO60312 1499 aa16.01■□□□□ 0.15
HNRNPC-224ENST00000556226 C9orf84Q5VXU9 1444 aa16■□□□□ 0.15
HNRNPC-224ENST00000556226 KDM5CP41229 1560 aa16■□□□□ 0.15
HNRNPC-224ENST00000556226 ARHGAP5Q13017 1502 aa15.99■□□□□ 0.15
HNRNPC-224ENST00000556226 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
HNRNPC-224ENST00000556226 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
HNRNPC-224ENST00000556226 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
HNRNPC-224ENST00000556226 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
HNRNPC-224ENST00000556226 DIP2CQ9Y2E4 1556 aa15.96■□□□□ 0.14
HNRNPC-224ENST00000556226 CLIP1P30622 1438 aa15.95■□□□□ 0.14
HNRNPC-224ENST00000556226 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
HNRNPC-224ENST00000556226 ABCA6Q8N139 1617 aa15.94■□□□□ 0.14
HNRNPC-224ENST00000556226 PREX1Q8TCU6 1659 aa15.93■□□□□ 0.14
HNRNPC-224ENST00000556226 PREX2Q70Z35 1606 aa15.93■□□□□ 0.14
HNRNPC-224ENST00000556226 ABCC1P33527 1531 aa15.92■□□□□ 0.14
HNRNPC-224ENST00000556226 CASKIN1Q8WXD9 1431 aa15.91■□□□□ 0.14
HNRNPC-224ENST00000556226 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
HNRNPC-224ENST00000556226 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
HNRNPC-224ENST00000556226 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
HNRNPC-224ENST00000556226 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
HNRNPC-224ENST00000556226 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
HNRNPC-224ENST00000556226 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
HNRNPC-224ENST00000556226 STRCQ7RTU9 1775 aa15.87■□□□□ 0.13
HNRNPC-224ENST00000556226 CERKQ8TCT0 537 aa15.87■□□□□ 0.13
HNRNPC-224ENST00000556226 KIDINS220Q9ULH0 1771 aa15.86■□□□□ 0.13
HNRNPC-224ENST00000556226 AGLP35573 1532 aa15.86■□□□□ 0.13
HNRNPC-224ENST00000556226 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
HNRNPC-224ENST00000556226 C3P01024 1663 aa15.86■□□□□ 0.13
HNRNPC-224ENST00000556226 FYCO1Q9BQS8 1478 aa15.84■□□□□ 0.13
HNRNPC-224ENST00000556226 UHRF1BP1Q6BDS2 1440 aa15.84■□□□□ 0.13
HNRNPC-224ENST00000556226 SAMD9LQ8IVG5 1584 aa15.83■□□□□ 0.12
HNRNPC-224ENST00000556226 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
HNRNPC-224ENST00000556226 SYCP2Q9BX26 1530 aa15.8■□□□□ 0.12
HNRNPC-224ENST00000556226 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
HNRNPC-224ENST00000556226 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
HNRNPC-224ENST00000556226 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.111e-7■■■□□ 15.4
HNRNPC-224ENST00000556226 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
HNRNPC-224ENST00000556226 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
HNRNPC-224ENST00000556226 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
HNRNPC-224ENST00000556226 PTPRTO14522 1441 aa15.74■□□□□ 0.11
HNRNPC-224ENST00000556226 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
HNRNPC-224ENST00000556226 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
HNRNPC-224ENST00000556226 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
HNRNPC-224ENST00000556226 ESF1Q9H501 851 aaKnown RBP15.73■□□□□ 0.11
HNRNPC-224ENST00000556226 PLXNC1O60486 1568 aa15.73■□□□□ 0.11
HNRNPC-224ENST00000556226 MROH2AA6NES4 1674 aa15.73■□□□□ 0.11
HNRNPC-224ENST00000556226 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
HNRNPC-224ENST00000556226 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
HNRNPC-224ENST00000556226 LTBP4Q8N2S1 1624 aa15.71■□□□□ 0.11
HNRNPC-224ENST00000556226 NPATQ14207 1427 aa15.7■□□□□ 0.1
HNRNPC-224ENST00000556226 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
HNRNPC-224ENST00000556226 ZMYM3Q14202 1370 aa15.69■□□□□ 0.1
HNRNPC-224ENST00000556226 CCNB3Q8WWL7 1395 aa15.69■□□□□ 0.1
HNRNPC-224ENST00000556226 A2MP01023 1474 aa15.69■□□□□ 0.1
HNRNPC-224ENST00000556226 PLEKHH2Q8IVE3 1493 aa15.69■□□□□ 0.1
HNRNPC-224ENST00000556226 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
HNRNPC-224ENST00000556226 CLTCQ00610 1675 aaKnown RBP15.69■□□□□ 0.1
HNRNPC-224ENST00000556226 CAMSAP1Q5T5Y3 1602 aa15.68■□□□□ 0.1
HNRNPC-224ENST00000556226 ZNF644Q9H582 1327 aaPredicted RBP15.68■□□□□ 0.1
HNRNPC-224ENST00000556226 MTUS2Q5JR59 1369 aa15.67■□□□□ 0.1
HNRNPC-224ENST00000556226 MYO3AQ8NEV4 1616 aa15.66■□□□□ 0.1
HNRNPC-224ENST00000556226 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
HNRNPC-224ENST00000556226 PTPRKQ15262 1439 aa15.65■□□□□ 0.1
HNRNPC-224ENST00000556226 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
HNRNPC-224ENST00000556226 ZNF142P52746 1687 aaPredicted RBP15.64■□□□□ 0.09
HNRNPC-224ENST00000556226 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
HNRNPC-224ENST00000556226 ADGBQ8N7X0 1667 aa15.63■□□□□ 0.09
HNRNPC-224ENST00000556226 GGT6Q6P531 493 aa15.62■□□□□ 0.09
HNRNPC-224ENST00000556226 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
HNRNPC-224ENST00000556226 CEP170BQ9Y4F5 1589 aaPredicted RBP15.62■□□□□ 0.09
HNRNPC-224ENST00000556226 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
HNRNPC-224ENST00000556226 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
HNRNPC-224ENST00000556226 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
HNRNPC-224ENST00000556226 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
HNRNPC-224ENST00000556226 TCOF1Q13428 1488 aaKnown RBP15.59■□□□□ 0.09
HNRNPC-224ENST00000556226 ILDR2Q71H61 639 aa15.59■□□□□ 0.09
HNRNPC-224ENST00000556226 ZNF335Q9H4Z2 1342 aaPredicted RBP15.59■□□□□ 0.09
HNRNPC-224ENST00000556226 RTEL1-TNFRSF6BF6WH68 1400 aa15.57■□□□□ 0.08
HNRNPC-224ENST00000556226 SPATA31D1Q6ZQQ2 1576 aa15.55■□□□□ 0.08
HNRNPC-224ENST00000556226 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
HNRNPC-224ENST00000556226 NCOA2Q15596 1464 aa15.55■□□□□ 0.08
HNRNPC-224ENST00000556226 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
HNRNPC-224ENST00000556226 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
HNRNPC-224ENST00000556226 A2ML1A8K2U0 1454 aa15.54■□□□□ 0.08
HNRNPC-224ENST00000556226 CCDC141Q6ZP82 1450 aa15.54■□□□□ 0.08
HNRNPC-224ENST00000556226 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms