RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PLCH2O75038 1416 aa15.39■□□□□ 0.05
SRP54-208ENST00000555557 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
SRP54-208ENST00000555557 CAMSAP2Q08AD1 1489 aa15.38■□□□□ 0.05
SRP54-208ENST00000555557 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
SRP54-208ENST00000555557 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
SRP54-208ENST00000555557 PREX2Q70Z35 1606 aa15.37■□□□□ 0.05
SRP54-208ENST00000555557 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
SRP54-208ENST00000555557 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
SRP54-208ENST00000555557 ABCA9Q8IUA7 1624 aa15.36■□□□□ 0.05
SRP54-208ENST00000555557 FAM69CQ0P6D2 419 aa15.36■□□□□ 0.05
SRP54-208ENST00000555557 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
SRP54-208ENST00000555557 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
SRP54-208ENST00000555557 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
SRP54-208ENST00000555557 ABCC5O15440 1437 aa15.33■□□□□ 0.04
SRP54-208ENST00000555557 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.04
SRP54-208ENST00000555557 DAPK1P53355 1430 aa15.32■□□□□ 0.04
SRP54-208ENST00000555557 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
SRP54-208ENST00000555557 FANCAO15360 1455 aa15.3■□□□□ 0.04
SRP54-208ENST00000555557 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
SRP54-208ENST00000555557 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
SRP54-208ENST00000555557 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
SRP54-208ENST00000555557 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
SRP54-208ENST00000555557 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
SRP54-208ENST00000555557 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
SRP54-208ENST00000555557 ARAP3Q8WWN8 1544 aa15.28■□□□□ 0.04
SRP54-208ENST00000555557 GLI2P10070 1586 aa15.27■□□□□ 0.04
SRP54-208ENST00000555557 KIAA1107Q9UPP5 1409 aa15.27■□□□□ 0.03
SRP54-208ENST00000555557 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
SRP54-208ENST00000555557 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
SRP54-208ENST00000555557 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
SRP54-208ENST00000555557 AFAP1Q8N556 730 aa15.25■□□□□ 0.03
SRP54-208ENST00000555557 RSPH4AQ5TD94 716 aa15.25■□□□□ 0.03
SRP54-208ENST00000555557 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
SRP54-208ENST00000555557 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 TRAPPC8Q9Y2L5 1435 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 ABCC1P33527 1531 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 MAP3K4Q9Y6R4 1608 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 ADGRL1O94910 1474 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
SRP54-208ENST00000555557 HFM1A2PYH4 1435 aa15.22■□□□□ 0.03
SRP54-208ENST00000555557 NAIPQ13075 1403 aa15.22■□□□□ 0.03
SRP54-208ENST00000555557 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
SRP54-208ENST00000555557 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
SRP54-208ENST00000555557 ROCK1Q13464 1354 aa15.21■□□□□ 0.02
SRP54-208ENST00000555557 NCOA1Q15788 1441 aa15.21■□□□□ 0.02
SRP54-208ENST00000555557 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
SRP54-208ENST00000555557 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
SRP54-208ENST00000555557 CROCC2H7BZ55 1655 aa15.19■□□□□ 0.02
SRP54-208ENST00000555557 SHANK2Q9UPX8 1470 aa15.18■□□□□ 0.02
SRP54-208ENST00000555557 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
SRP54-208ENST00000555557 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
SRP54-208ENST00000555557 NEO1Q92859 1461 aa15.18■□□□□ 0.02
SRP54-208ENST00000555557 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
SRP54-208ENST00000555557 MYT1LQ9UL68 1186 aa15.17■□□□□ 0.02
SRP54-208ENST00000555557 ADGRL2O95490 1459 aa15.17■□□□□ 0.02
SRP54-208ENST00000555557 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
SRP54-208ENST00000555557 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
SRP54-208ENST00000555557 KIF15Q9NS87 1388 aa15.15■□□□□ 0.02
SRP54-208ENST00000555557 KDM6BO15054 1643 aa15.14■□□□□ 0.01
SRP54-208ENST00000555557 HRCP23327 699 aa15.13■□□□□ 0.01
SRP54-208ENST00000555557 POGZQ7Z3K3 1410 aa15.13■□□□□ 0.01
SRP54-208ENST00000555557 DENND4BO75064 1496 aaPredicted RBP15.13■□□□□ 0.01
SRP54-208ENST00000555557 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
SRP54-208ENST00000555557 ADGBQ8N7X0 1667 aa15.13■□□□□ 0.01
SRP54-208ENST00000555557 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
SRP54-208ENST00000555557 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
SRP54-208ENST00000555557 ANKRD50Q9ULJ7 1429 aa15.11■□□□□ 0.01
SRP54-208ENST00000555557 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
SRP54-208ENST00000555557 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
SRP54-208ENST00000555557 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
SRP54-208ENST00000555557 RTEL1-TNFRSF6BF6WH68 1400 aa15.1■□□□□ 0.01
SRP54-208ENST00000555557 ZFYVE16Q7Z3T8 1539 aa15.09■□□□□ 0.01
SRP54-208ENST00000555557 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
SRP54-208ENST00000555557 ATP7AQ04656 1500 aa15.07■□□□□ 0
SRP54-208ENST00000555557 KDM5CP41229 1560 aa15.06■□□□□ 0
SRP54-208ENST00000555557 PLXNC1O60486 1568 aa15.06■□□□□ 0
SRP54-208ENST00000555557 INO80Q9ULG1 1556 aaPredicted RBP15.06■□□□□ 0
SRP54-208ENST00000555557 MLH3Q9UHC1 1453 aa15.05■□□□□ -0
SRP54-208ENST00000555557 RICTORQ6R327 1708 aa15.04■□□□□ -0
SRP54-208ENST00000555557 KIDINS220Q9ULH0 1771 aa15.04■□□□□ -0
SRP54-208ENST00000555557 DUOX2Q9NRD8 1548 aa15.03■□□□□ -0
SRP54-208ENST00000555557 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
SRP54-208ENST00000555557 MPHOSPH9Q99550 1183 aa15.02■□□□□ -0
SRP54-208ENST00000555557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -06e-10■■■□□ 14.9
SRP54-208ENST00000555557 HECW2Q9P2P5 1572 aa15.02□□□□□ -0.01
SRP54-208ENST00000555557 YEATS2Q9ULM3 1422 aa15.02□□□□□ -0.01
SRP54-208ENST00000555557 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
SRP54-208ENST00000555557 ERBINQ96RT1 1412 aa15.01□□□□□ -0.01
SRP54-208ENST00000555557 NUP155O75694 1391 aa15□□□□□ -0.01
SRP54-208ENST00000555557 KIF3BO15066 747 aa15□□□□□ -0.01
SRP54-208ENST00000555557 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
SRP54-208ENST00000555557 FOXD1Q16676 465 aa14.99□□□□□ -0.01
SRP54-208ENST00000555557 A2MP01023 1474 aa14.98□□□□□ -0.01
SRP54-208ENST00000555557 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
SRP54-208ENST00000555557 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
SRP54-208ENST00000555557 PZPP20742 1482 aa14.97□□□□□ -0.01
SRP54-208ENST00000555557 ZMYM4Q5VZL5 1548 aa14.96□□□□□ -0.01
SRP54-208ENST00000555557 DIP2CQ9Y2E4 1556 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms