RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 G3V3G9 751 aa8.25□□□□□ -1.09
CPSF2-204ENST00000555244 POTEMA6NI47 508 aa8.23□□□□□ -1.09
CPSF2-204ENST00000555244 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
CPSF2-204ENST00000555244 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
CPSF2-204ENST00000555244 PHF8Q9UPP1 1060 aa8.22□□□□□ -1.09
CPSF2-204ENST00000555244 BOLA1Q9Y3E2 137 aa8.22□□□□□ -1.09
CPSF2-204ENST00000555244 NKX1-1Q15270 411 aaPredicted RBP8.21□□□□□ -1.1
CPSF2-204ENST00000555244 SOX12O15370 315 aa8.2□□□□□ -1.1
CPSF2-204ENST00000555244 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
CPSF2-204ENST00000555244 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
CPSF2-204ENST00000555244 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
CPSF2-204ENST00000555244 TSHZ2Q9NRE2 1034 aa8.17□□□□□ -1.1
CPSF2-204ENST00000555244 SCRIBQ14160 1630 aa8.17□□□□□ -1.1
CPSF2-204ENST00000555244 ST18O60284 1047 aa8.16□□□□□ -1.1
CPSF2-204ENST00000555244 NLRP6P59044 892 aa8.15□□□□□ -1.1
CPSF2-204ENST00000555244 SNPHO15079 494 aa8.13□□□□□ -1.11
CPSF2-204ENST00000555244 MICALL2Q8IY33 904 aa8.13□□□□□ -1.11
CPSF2-204ENST00000555244 MFRPQ9BY79 579 aa8.13□□□□□ -1.11
CPSF2-204ENST00000555244 KDM2AQ9Y2K7 1162 aa8.12□□□□□ -1.11
CPSF2-204ENST00000555244 FBXO22Q8NEZ5 403 aa8.11□□□□□ -1.11
CPSF2-204ENST00000555244 TMEM121BQ9BXQ6 578 aaPredicted RBP8.11□□□□□ -1.11
CPSF2-204ENST00000555244 MARVELD3Q96A59 401 aa8.09□□□□□ -1.11
CPSF2-204ENST00000555244 BCANQ96GW7 911 aa8.09□□□□□ -1.11
CPSF2-204ENST00000555244 PLSCR2Q9NRY7 297 aa8.09□□□□□ -1.11
CPSF2-204ENST00000555244 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
CPSF2-204ENST00000555244 EIF4G1Q04637 1599 aaKnown RBP8.08□□□□□ -1.12
CPSF2-204ENST00000555244 PCDH10Q9P2E7 1040 aa8.06□□□□□ -1.12
CPSF2-204ENST00000555244 CC2D2AQ9P2K1 1620 aa8.04□□□□□ -1.12
CPSF2-204ENST00000555244 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
CPSF2-204ENST00000555244 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
CPSF2-204ENST00000555244 CDAN1Q8IWY9 1227 aa8.03□□□□□ -1.12
CPSF2-204ENST00000555244 PPP1R37O75864 691 aa8.02□□□□□ -1.13
CPSF2-204ENST00000555244 EMP3P54852 163 aa8.02□□□□□ -1.13
CPSF2-204ENST00000555244 CECR2Q9BXF3 1484 aa8.01□□□□□ -1.13
CPSF2-204ENST00000555244 DOK7Q18PE1 504 aa8.01□□□□□ -1.13
CPSF2-204ENST00000555244 FAM205CA6NFA0 338 aa7.99□□□□□ -1.13
CPSF2-204ENST00000555244 WDR70Q9NW82 654 aa7.98□□□□□ -1.13
CPSF2-204ENST00000555244 C2orf72A6NCS6 295 aa7.97□□□□□ -1.13
CPSF2-204ENST00000555244 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
CPSF2-204ENST00000555244 NBR1Q14596 966 aa7.95□□□□□ -1.14
CPSF2-204ENST00000555244 TMC2Q8TDI7 906 aa7.95□□□□□ -1.14
CPSF2-204ENST00000555244 HOXB1P14653 301 aaPredicted RBP7.94□□□□□ -1.14
CPSF2-204ENST00000555244 P3H3Q8IVL6 736 aa7.94□□□□□ -1.14
CPSF2-204ENST00000555244 HS3ST6Q96QI5 342 aa7.94□□□□□ -1.14
CPSF2-204ENST00000555244 POTEB3A0JP26 581 aa7.93□□□□□ -1.14
CPSF2-204ENST00000555244 POTEBQ6S5H4 581 aa7.93□□□□□ -1.14
CPSF2-204ENST00000555244 ERBB3P21860 1342 aa7.93□□□□□ -1.14
CPSF2-204ENST00000555244 NCAPD3P42695 1498 aa7.93□□□□□ -1.14
CPSF2-204ENST00000555244 KIF3CO14782 793 aa7.92□□□□□ -1.14
CPSF2-204ENST00000555244 CADPS2Q86UW7 1296 aa7.92□□□□□ -1.14
CPSF2-204ENST00000555244 ARSIQ5FYB1 569 aa7.91□□□□□ -1.14
CPSF2-204ENST00000555244 KHSRPQ92945 711 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPSF2-204ENST00000555244 GPR153Q6NV75 609 aa7.89□□□□□ -1.15
CPSF2-204ENST00000555244 ZSWIM6Q9HCJ5 1215 aa7.89□□□□□ -1.15
CPSF2-204ENST00000555244 ATAD2BQ9ULI0 1458 aa7.88□□□□□ -1.15
CPSF2-204ENST00000555244 PDE4AP27815 886 aa7.88□□□□□ -1.15
CPSF2-204ENST00000555244 VARS2Q5ST30 1063 aaKnown RBP7.88□□□□□ -1.15
CPSF2-204ENST00000555244 SMARCA4P51532 1647 aa7.87□□□□□ -1.15
CPSF2-204ENST00000555244 PEG3Q9GZU2 1588 aa7.87□□□□□ -1.15
CPSF2-204ENST00000555244 BAZ1AQ9NRL2 1556 aaPredicted RBP7.87□□□□□ -1.15
CPSF2-204ENST00000555244 SMARCA2P51531 1590 aa7.86□□□□□ -1.15
CPSF2-204ENST00000555244 HMGXB3Q12766 1538 aa7.85□□□□□ -1.15
CPSF2-204ENST00000555244 NUDT7P0C024 238 aa7.84□□□□□ -1.15
CPSF2-204ENST00000555244 PLPP6Q8IY26 295 aa7.84□□□□□ -1.15
CPSF2-204ENST00000555244 LARP6Q9BRS8 491 aaKnown RBP7.84□□□□□ -1.15
CPSF2-204ENST00000555244 DSG2Q14126 1118 aa7.83□□□□□ -1.16
CPSF2-204ENST00000555244 E2F4Q16254 413 aa7.83□□□□□ -1.16
CPSF2-204ENST00000555244 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
CPSF2-204ENST00000555244 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
CPSF2-204ENST00000555244 GPHNQ9NQX3 736 aaPredicted RBP7.83□□□□□ -1.16
CPSF2-204ENST00000555244 PCDHGA4Q9Y5G9 962 aa7.83□□□□□ -1.16
CPSF2-204ENST00000555244 NCKAP5LQ9HCH0 1330 aa7.82□□□□□ -1.16
CPSF2-204ENST00000555244 FOXK1P85037 733 aa7.82□□□□□ -1.16
CPSF2-204ENST00000555244 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
CPSF2-204ENST00000555244 CRISPLD2Q9H0B8 497 aa7.82□□□□□ -1.16
CPSF2-204ENST00000555244 SPNS2Q8IVW8 549 aa7.81□□□□□ -1.16
CPSF2-204ENST00000555244 KCNV2Q8TDN2 545 aa7.81□□□□□ -1.16
CPSF2-204ENST00000555244 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
CPSF2-204ENST00000555244 ZNF316A6NFI3 1004 aaPredicted RBP7.8□□□□□ -1.16
CPSF2-204ENST00000555244 MFSD10Q14728 455 aa7.8□□□□□ -1.16
CPSF2-204ENST00000555244 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
CPSF2-204ENST00000555244 SLC34A2O95436 690 aa7.79□□□□□ -1.16
CPSF2-204ENST00000555244 LHX6Q9UPM6 363 aa7.78□□□□□ -1.16
CPSF2-204ENST00000555244 BAZ1BQ9UIG0 1483 aaKnown RBP7.77□□□□□ -1.17
CPSF2-204ENST00000555244 ZNF687Q8N1G0 1237 aa7.77□□□□□ -1.17
CPSF2-204ENST00000555244 UPF1Q92900 1129 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPSF2-204ENST00000555244 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
CPSF2-204ENST00000555244 MMRN1Q13201 1228 aa7.76□□□□□ -1.17
CPSF2-204ENST00000555244 TPRNQ4KMQ1 711 aa7.76□□□□□ -1.17
CPSF2-204ENST00000555244 PPP1R15BQ5SWA1 713 aa7.76□□□□□ -1.17
CPSF2-204ENST00000555244 PTCD2Q8WV60 388 aaKnown RBP7.75□□□□□ -1.17
CPSF2-204ENST00000555244 TBC1D12O60347 775 aa7.73□□□□□ -1.17
CPSF2-204ENST00000555244 PRKCSHP14314 528 aaPredicted RBP7.72□□□□□ -1.17
CPSF2-204ENST00000555244 CAMK2BQ13554 666 aa7.72□□□□□ -1.17
CPSF2-204ENST00000555244 ANKRD13DQ6ZTN6 518 aa7.72□□□□□ -1.17
CPSF2-204ENST00000555244 AXIN2Q9Y2T1 843 aa7.72□□□□□ -1.17
CPSF2-204ENST00000555244 RSF1Q96T23 1441 aaPredicted RBP7.71□□□□□ -1.17
CPSF2-204ENST00000555244 ARIH1Q9Y4X5 557 aaPredicted RBP7.71□□□□□ -1.18
CPSF2-204ENST00000555244 OXER1Q8TDS5 423 aa7.69□□□□□ -1.18
CPSF2-204ENST00000555244 LAMC3Q9Y6N6 1575 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms