RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 ZFYVE16Q7Z3T8 1539 aa16.65■□□□□ 0.26
HNRNPC-218ENST00000555215 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
HNRNPC-218ENST00000555215 EFCAB2Q5VUJ9 269 aa16.64■□□□□ 0.25
HNRNPC-218ENST00000555215 LMTK3Q96Q04 1460 aa16.64■□□□□ 0.25
HNRNPC-218ENST00000555215 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
HNRNPC-218ENST00000555215 LRRIQ1Q96JM4 1722 aa16.64■□□□□ 0.25
HNRNPC-218ENST00000555215 HSPA2P54652 639 aa16.63■□□□□ 0.25
HNRNPC-218ENST00000555215 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
HNRNPC-218ENST00000555215 AFAP1Q8N556 730 aa16.62■□□□□ 0.25
HNRNPC-218ENST00000555215 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
HNRNPC-218ENST00000555215 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
HNRNPC-218ENST00000555215 PCF11O94913 1555 aaKnown RBP16.6■□□□□ 0.25
HNRNPC-218ENST00000555215 MYO5CQ9NQX4 1742 aa16.57■□□□□ 0.24
HNRNPC-218ENST00000555215 ATP10AO60312 1499 aa16.57■□□□□ 0.24
HNRNPC-218ENST00000555215 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-218ENST00000555215 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
HNRNPC-218ENST00000555215 ARHGEF12Q9NZN5 1544 aa16.55■□□□□ 0.24
HNRNPC-218ENST00000555215 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
HNRNPC-218ENST00000555215 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
HNRNPC-218ENST00000555215 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
HNRNPC-218ENST00000555215 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
HNRNPC-218ENST00000555215 CLIP1P30622 1438 aa16.53■□□□□ 0.24
HNRNPC-218ENST00000555215 FBXO41Q8TF61 875 aa16.52■□□□□ 0.24
HNRNPC-218ENST00000555215 KDM5CP41229 1560 aa16.51■□□□□ 0.23
HNRNPC-218ENST00000555215 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
HNRNPC-218ENST00000555215 FER1L4A9Z1Z3 1794 aa16.5■□□□□ 0.23
HNRNPC-218ENST00000555215 DIP2CQ9Y2E4 1556 aa16.48■□□□□ 0.23
HNRNPC-218ENST00000555215 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
HNRNPC-218ENST00000555215 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
HNRNPC-218ENST00000555215 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
HNRNPC-218ENST00000555215 ABCC1P33527 1531 aa16.45■□□□□ 0.22
HNRNPC-218ENST00000555215 PREX2Q70Z35 1606 aa16.45■□□□□ 0.22
HNRNPC-218ENST00000555215 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
HNRNPC-218ENST00000555215 ZNF777Q9ULD5 760 aaPredicted RBP16.44■□□□□ 0.22
HNRNPC-218ENST00000555215 FYCO1Q9BQS8 1478 aa16.43■□□□□ 0.22
HNRNPC-218ENST00000555215 CDC42BPAQ5VT25 1732 aa16.43■□□□□ 0.22
HNRNPC-218ENST00000555215 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
HNRNPC-218ENST00000555215 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.225e-7■■■■□ 19.9
HNRNPC-218ENST00000555215 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
HNRNPC-218ENST00000555215 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
HNRNPC-218ENST00000555215 REREQ9P2R6 1566 aa16.4■□□□□ 0.22
HNRNPC-218ENST00000555215 SAMD9LQ8IVG5 1584 aa16.39■□□□□ 0.21
HNRNPC-218ENST00000555215 AGLP35573 1532 aa16.38■□□□□ 0.21
HNRNPC-218ENST00000555215 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
HNRNPC-218ENST00000555215 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
HNRNPC-218ENST00000555215 SYCP2Q9BX26 1530 aa16.36■□□□□ 0.21
HNRNPC-218ENST00000555215 PREX1Q8TCU6 1659 aa16.36■□□□□ 0.21
HNRNPC-218ENST00000555215 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
HNRNPC-218ENST00000555215 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
HNRNPC-218ENST00000555215 C3P01024 1663 aa16.34■□□□□ 0.21
HNRNPC-218ENST00000555215 STRCQ7RTU9 1775 aa16.34■□□□□ 0.21
HNRNPC-218ENST00000555215 SPAG9O60271 1321 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-218ENST00000555215 UHRF1BP1Q6BDS2 1440 aa16.33■□□□□ 0.2
HNRNPC-218ENST00000555215 CCNB3Q8WWL7 1395 aa16.32■□□□□ 0.2
HNRNPC-218ENST00000555215 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
HNRNPC-218ENST00000555215 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
HNRNPC-218ENST00000555215 ESF1Q9H501 851 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-218ENST00000555215 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
HNRNPC-218ENST00000555215 ATP7AQ04656 1500 aa16.28■□□□□ 0.2
HNRNPC-218ENST00000555215 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
HNRNPC-218ENST00000555215 SUPT6HQ7KZ85 1726 aaKnown RBP16.27■□□□□ 0.19
HNRNPC-218ENST00000555215 MBD5Q9P267 1494 aa16.27■□□□□ 0.19
HNRNPC-218ENST00000555215 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
HNRNPC-218ENST00000555215 CNTLNQ9NXG0 1405 aa16.26■□□□□ 0.19
HNRNPC-218ENST00000555215 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
HNRNPC-218ENST00000555215 A2MP01023 1474 aa16.25■□□□□ 0.19
HNRNPC-218ENST00000555215 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
HNRNPC-218ENST00000555215 GGT6Q6P531 493 aa16.25■□□□□ 0.19
HNRNPC-218ENST00000555215 PLXNC1O60486 1568 aa16.25■□□□□ 0.19
HNRNPC-218ENST00000555215 PLEKHH2Q8IVE3 1493 aa16.24■□□□□ 0.19
HNRNPC-218ENST00000555215 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
HNRNPC-218ENST00000555215 PTPRTO14522 1441 aa16.22■□□□□ 0.19
HNRNPC-218ENST00000555215 NCOA1Q15788 1441 aa16.22■□□□□ 0.19
HNRNPC-218ENST00000555215 EHBP1L1Q8N3D4 1523 aa16.21■□□□□ 0.19
HNRNPC-218ENST00000555215 NCKAP5LQ9HCH0 1330 aa16.2■□□□□ 0.18
HNRNPC-218ENST00000555215 NPATQ14207 1427 aa16.2■□□□□ 0.18
HNRNPC-218ENST00000555215 PTPRKQ15262 1439 aa16.2■□□□□ 0.18
HNRNPC-218ENST00000555215 CLTCQ00610 1675 aaKnown RBP16.2■□□□□ 0.18
HNRNPC-218ENST00000555215 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
HNRNPC-218ENST00000555215 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
HNRNPC-218ENST00000555215 NCOA2Q15596 1464 aa16.18■□□□□ 0.18
HNRNPC-218ENST00000555215 CAMSAP1Q5T5Y3 1602 aa16.18■□□□□ 0.18
HNRNPC-218ENST00000555215 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
HNRNPC-218ENST00000555215 RTEL1-TNFRSF6BF6WH68 1400 aa16.15■□□□□ 0.18
HNRNPC-218ENST00000555215 FBXO31Q5XUX0 539 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-218ENST00000555215 KIF3BO15066 747 aa16.14■□□□□ 0.17
HNRNPC-218ENST00000555215 KANK4Q5T7N3 995 aaPredicted RBP16.14■□□□□ 0.17
HNRNPC-218ENST00000555215 CAMSAP2Q08AD1 1489 aa16.14■□□□□ 0.17
HNRNPC-218ENST00000555215 ADGBQ8N7X0 1667 aa16.13■□□□□ 0.17
HNRNPC-218ENST00000555215 ZNF335Q9H4Z2 1342 aaPredicted RBP16.13■□□□□ 0.17
HNRNPC-218ENST00000555215 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
HNRNPC-218ENST00000555215 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
HNRNPC-218ENST00000555215 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
HNRNPC-218ENST00000555215 CEP170BQ9Y4F5 1589 aaPredicted RBP16.1■□□□□ 0.17
HNRNPC-218ENST00000555215 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
HNRNPC-218ENST00000555215 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
HNRNPC-218ENST00000555215 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
HNRNPC-218ENST00000555215 ZNF142P52746 1687 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-218ENST00000555215 PKD2Q13563 968 aa16.07■□□□□ 0.16
HNRNPC-218ENST00000555215 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms