RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 PTPRKQ15262 1439 aa16.37■□□□□ 0.21
GABRB3-208ENST00000555094 ITGAEP38570 1179 aa16.36■□□□□ 0.21
GABRB3-208ENST00000555094 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
GABRB3-208ENST00000555094 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
GABRB3-208ENST00000555094 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
GABRB3-208ENST00000555094 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
GABRB3-208ENST00000555094 HRCP23327 699 aa16.32■□□□□ 0.2
GABRB3-208ENST00000555094 CFDP1Q9UEE9 299 aaPredicted RBP16.32■□□□□ 0.2
GABRB3-208ENST00000555094 DAPK1P53355 1430 aa16.32■□□□□ 0.2
GABRB3-208ENST00000555094 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
GABRB3-208ENST00000555094 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
GABRB3-208ENST00000555094 ARHGAP5Q13017 1502 aa16.3■□□□□ 0.2
GABRB3-208ENST00000555094 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
GABRB3-208ENST00000555094 ABCC5O15440 1437 aa16.3■□□□□ 0.2
GABRB3-208ENST00000555094 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
GABRB3-208ENST00000555094 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
GABRB3-208ENST00000555094 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
GABRB3-208ENST00000555094 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
GABRB3-208ENST00000555094 SETD5Q9C0A6 1442 aa16.29■□□□□ 0.2
GABRB3-208ENST00000555094 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.2
GABRB3-208ENST00000555094 KCNH8Q96L42 1107 aa16.27■□□□□ 0.19
GABRB3-208ENST00000555094 PLCH2O75038 1416 aa16.27■□□□□ 0.19
GABRB3-208ENST00000555094 SHANK2Q9UPX8 1470 aa16.26■□□□□ 0.19
GABRB3-208ENST00000555094 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
GABRB3-208ENST00000555094 NAIPQ13075 1403 aa16.25■□□□□ 0.19
GABRB3-208ENST00000555094 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
GABRB3-208ENST00000555094 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
GABRB3-208ENST00000555094 ABCC1P33527 1531 aa16.24■□□□□ 0.19
GABRB3-208ENST00000555094 MBD5Q9P267 1494 aa16.24■□□□□ 0.19
GABRB3-208ENST00000555094 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
GABRB3-208ENST00000555094 ROCK1Q13464 1354 aa16.23■□□□□ 0.19
GABRB3-208ENST00000555094 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
GABRB3-208ENST00000555094 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
GABRB3-208ENST00000555094 PLEKHH2Q8IVE3 1493 aa16.22■□□□□ 0.19
GABRB3-208ENST00000555094 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
GABRB3-208ENST00000555094 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
GABRB3-208ENST00000555094 KDM6BO15054 1643 aa16.2■□□□□ 0.18
GABRB3-208ENST00000555094 MAST1Q9Y2H9 1570 aa16.2■□□□□ 0.18
GABRB3-208ENST00000555094 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
GABRB3-208ENST00000555094 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
GABRB3-208ENST00000555094 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
GABRB3-208ENST00000555094 CHIC2Q9UKJ5 165 aa16.17■□□□□ 0.18
GABRB3-208ENST00000555094 GLI2P10070 1586 aa16.17■□□□□ 0.18
GABRB3-208ENST00000555094 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
GABRB3-208ENST00000555094 FANCAO15360 1455 aa16.17■□□□□ 0.18
GABRB3-208ENST00000555094 MAP3K4Q9Y6R4 1608 aa16.17■□□□□ 0.18
GABRB3-208ENST00000555094 DIP2BQ9P265 1576 aa16.16■□□□□ 0.18
GABRB3-208ENST00000555094 NCOA1Q15788 1441 aa16.16■□□□□ 0.18
GABRB3-208ENST00000555094 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
GABRB3-208ENST00000555094 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
GABRB3-208ENST00000555094 RRP7BPQ9NSQ0 103 aa16.15■□□□□ 0.18
GABRB3-208ENST00000555094 PLXNC1O60486 1568 aa16.14■□□□□ 0.17
GABRB3-208ENST00000555094 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.17
GABRB3-208ENST00000555094 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
GABRB3-208ENST00000555094 CD109Q6YHK3 1445 aa16.12■□□□□ 0.17
GABRB3-208ENST00000555094 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
GABRB3-208ENST00000555094 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
GABRB3-208ENST00000555094 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
GABRB3-208ENST00000555094 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
GABRB3-208ENST00000555094 ZFYVE16Q7Z3T8 1539 aa16.09■□□□□ 0.17
GABRB3-208ENST00000555094 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
GABRB3-208ENST00000555094 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.16
GABRB3-208ENST00000555094 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
GABRB3-208ENST00000555094 KIF15Q9NS87 1388 aa16.06■□□□□ 0.16
GABRB3-208ENST00000555094 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
GABRB3-208ENST00000555094 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
GABRB3-208ENST00000555094 NEO1Q92859 1461 aa16.06■□□□□ 0.16
GABRB3-208ENST00000555094 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
GABRB3-208ENST00000555094 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
GABRB3-208ENST00000555094 KDM5CP41229 1560 aa16.04■□□□□ 0.16
GABRB3-208ENST00000555094 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
GABRB3-208ENST00000555094 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
GABRB3-208ENST00000555094 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.15
GABRB3-208ENST00000555094 POGZQ7Z3K3 1410 aa16.02■□□□□ 0.15
GABRB3-208ENST00000555094 DUOX2Q9NRD8 1548 aa16.02■□□□□ 0.15
GABRB3-208ENST00000555094 ZNF518AQ6AHZ1 1483 aa16.01■□□□□ 0.15
GABRB3-208ENST00000555094 UNC13BO14795 1591 aa16.01■□□□□ 0.15
GABRB3-208ENST00000555094 KDM5DQ9BY66 1539 aa16.01■□□□□ 0.15
GABRB3-208ENST00000555094 TSPOAP1O95153 1857 aa16.01■□□□□ 0.15
GABRB3-208ENST00000555094 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
GABRB3-208ENST00000555094 RICTORQ6R327 1708 aa16■□□□□ 0.15
GABRB3-208ENST00000555094 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
GABRB3-208ENST00000555094 PZPP20742 1482 aa15.99■□□□□ 0.15
GABRB3-208ENST00000555094 HECW2Q9P2P5 1572 aa15.98■□□□□ 0.15
GABRB3-208ENST00000555094 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
GABRB3-208ENST00000555094 SPAG9O60271 1321 aaKnown RBP15.98■□□□□ 0.15
GABRB3-208ENST00000555094 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
GABRB3-208ENST00000555094 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
GABRB3-208ENST00000555094 FAM69CQ0P6D2 419 aa15.97■□□□□ 0.15
GABRB3-208ENST00000555094 MAGI2Q86UL8 1455 aa15.95■□□□□ 0.14
GABRB3-208ENST00000555094 TEX14Q8IWB6 1497 aa15.95■□□□□ 0.14
GABRB3-208ENST00000555094 ADRA2BP18089 450 aa15.95■□□□□ 0.14
GABRB3-208ENST00000555094 EIF2AK4Q9P2K8 1649 aaKnown RBP15.95■□□□□ 0.14
GABRB3-208ENST00000555094 TRIM52Q96A61 297 aa15.94■□□□□ 0.14
GABRB3-208ENST00000555094 MLH3Q9UHC1 1453 aa15.94■□□□□ 0.14
GABRB3-208ENST00000555094 DEPDC5O75140 1603 aa15.93■□□□□ 0.14
GABRB3-208ENST00000555094 ABCA6Q8N139 1617 aa15.93■□□□□ 0.14
GABRB3-208ENST00000555094 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
GABRB3-208ENST00000555094 ZMYM4Q5VZL5 1548 aa15.91■□□□□ 0.14
GABRB3-208ENST00000555094 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms