RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ERBB3P21860 1342 aa9.34□□□□□ -0.91
ATXN3-231ENST00000554994 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
ATXN3-231ENST00000554994 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-231ENST00000554994 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
ATXN3-231ENST00000554994 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-231ENST00000554994 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
ATXN3-231ENST00000554994 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-231ENST00000554994 ZCCHC6Q5VYS8 1495 aaKnown RBP9.28□□□□□ -0.92
ATXN3-231ENST00000554994 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
ATXN3-231ENST00000554994 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
ATXN3-231ENST00000554994 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-231ENST00000554994 RIMBP2O15034 1052 aa9.26□□□□□ -0.93
ATXN3-231ENST00000554994 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-231ENST00000554994 DCAF1Q9Y4B6 1507 aa9.26□□□□□ -0.93
ATXN3-231ENST00000554994 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
ATXN3-231ENST00000554994 RIMBP3CA6NJZ7 1639 aa9.23□□□□□ -0.93
ATXN3-231ENST00000554994 RIMBP3BA6NNM3 1639 aa9.23□□□□□ -0.93
ATXN3-231ENST00000554994 RIMBP3Q9UFD9 1639 aa9.23□□□□□ -0.93
ATXN3-231ENST00000554994 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
ATXN3-231ENST00000554994 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
ATXN3-231ENST00000554994 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
ATXN3-231ENST00000554994 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
ATXN3-231ENST00000554994 ATAD2BQ9ULI0 1458 aa9.17□□□□□ -0.94
ATXN3-231ENST00000554994 ZNF687Q8N1G0 1237 aa9.15□□□□□ -0.94
ATXN3-231ENST00000554994 ANKRD13DQ6ZTN6 518 aa9.14□□□□□ -0.95
ATXN3-231ENST00000554994 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
ATXN3-231ENST00000554994 ARHGEF11O15085 1522 aa9.14□□□□□ -0.95
ATXN3-231ENST00000554994 LAMC3Q9Y6N6 1575 aa9.13□□□□□ -0.95
ATXN3-231ENST00000554994 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
ATXN3-231ENST00000554994 GPR153Q6NV75 609 aa9.13□□□□□ -0.95
ATXN3-231ENST00000554994 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
ATXN3-231ENST00000554994 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
ATXN3-231ENST00000554994 PHF8Q9UPP1 1060 aa9.12□□□□□ -0.95
ATXN3-231ENST00000554994 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
ATXN3-231ENST00000554994 MRC2Q9UBG0 1479 aa9.11□□□□□ -0.95
ATXN3-231ENST00000554994 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
ATXN3-231ENST00000554994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-231ENST00000554994 SOX12O15370 315 aa9.1□□□□□ -0.95
ATXN3-231ENST00000554994 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATXN3-231ENST00000554994 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-231ENST00000554994 WDR62O43379 1518 aa9.1□□□□□ -0.95
ATXN3-231ENST00000554994 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
ATXN3-231ENST00000554994 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-231ENST00000554994 BAZ1BQ9UIG0 1483 aaKnown RBP9.06□□□□□ -0.96
ATXN3-231ENST00000554994 PTGER2P43116 358 aa9.05□□□□□ -0.96
ATXN3-231ENST00000554994 ZNF316A6NFI3 1004 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-231ENST00000554994 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-231ENST00000554994 ARAP1Q96P48 1450 aa9.02□□□□□ -0.96
ATXN3-231ENST00000554994 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-231ENST00000554994 NLRP6P59044 892 aa9□□□□□ -0.97
ATXN3-231ENST00000554994 SMARCA4P51532 1647 aa9□□□□□ -0.97
ATXN3-231ENST00000554994 NUDT7P0C024 238 aa8.99□□□□□ -0.97
ATXN3-231ENST00000554994 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-231ENST00000554994 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
ATXN3-231ENST00000554994 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
ATXN3-231ENST00000554994 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
ATXN3-231ENST00000554994 CEP164Q9UPV0 1460 aa8.95□□□□□ -0.98
ATXN3-231ENST00000554994 C2orf72A6NCS6 295 aa8.94□□□□□ -0.98
ATXN3-231ENST00000554994 FBXO22Q8NEZ5 403 aa8.94□□□□□ -0.98
ATXN3-231ENST00000554994 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
ATXN3-231ENST00000554994 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
ATXN3-231ENST00000554994 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
ATXN3-231ENST00000554994 PBX2P40425 430 aa8.9□□□□□ -0.98
ATXN3-231ENST00000554994 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
ATXN3-231ENST00000554994 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
ATXN3-231ENST00000554994 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.99
ATXN3-231ENST00000554994 STK25O00506 426 aa8.89□□□□□ -0.99
ATXN3-231ENST00000554994 FANCD2Q9BXW9 1451 aa8.89□□□□□ -0.99
ATXN3-231ENST00000554994 KIF3CO14782 793 aa8.88□□□□□ -0.99
ATXN3-231ENST00000554994 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
ATXN3-231ENST00000554994 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
ATXN3-231ENST00000554994 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
ATXN3-231ENST00000554994 HCSTQ9UBK5 93 aa8.87□□□□□ -0.99
ATXN3-231ENST00000554994 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
ATXN3-231ENST00000554994 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
ATXN3-231ENST00000554994 CHD1O14646 1710 aa8.83□□□□□ -1
ATXN3-231ENST00000554994 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
ATXN3-231ENST00000554994 ARHGAP33O14559 1287 aa8.82□□□□□ -1
ATXN3-231ENST00000554994 SLC34A2O95436 690 aa8.81□□□□□ -1
ATXN3-231ENST00000554994 ECM2O94769 699 aaPredicted RBP8.79□□□□□ -1
ATXN3-231ENST00000554994 PSEN2P49810 448 aa8.79□□□□□ -1
ATXN3-231ENST00000554994 EIF4G3O43432 1585 aaKnown RBP8.78□□□□□ -1
ATXN3-231ENST00000554994 MROH2BQ7Z745 1585 aa8.78□□□□□ -1
ATXN3-231ENST00000554994 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
ATXN3-231ENST00000554994 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
ATXN3-231ENST00000554994 STAC3Q96MF2 364 aa8.78□□□□□ -1
ATXN3-231ENST00000554994 IFT140Q96RY7 1462 aa8.77□□□□□ -1
ATXN3-231ENST00000554994 KDM4FA0A1W2PPD8 638 aa8.77□□□□□ -1.01
ATXN3-231ENST00000554994 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-231ENST00000554994 PPP1R37O75864 691 aa8.75□□□□□ -1.01
ATXN3-231ENST00000554994 AQRO60306 1485 aaKnown RBP eCLIP8.72□□□□□ -1.01
ATXN3-231ENST00000554994 TK2O00142 265 aa8.72□□□□□ -1.01
ATXN3-231ENST00000554994 HRO43593 1189 aa8.72□□□□□ -1.01
ATXN3-231ENST00000554994 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
ATXN3-231ENST00000554994 CFTRP13569 1480 aa8.71□□□□□ -1.01
ATXN3-231ENST00000554994 RGL2O15211 777 aa8.71□□□□□ -1.02
ATXN3-231ENST00000554994 PTPN5P54829 565 aa8.71□□□□□ -1.02
ATXN3-231ENST00000554994 PLPP6Q8IY26 295 aa8.7□□□□□ -1.02
ATXN3-231ENST00000554994 PTCD2Q8WV60 388 aaKnown RBP8.7□□□□□ -1.02
ATXN3-231ENST00000554994 KCNK17Q96T54 332 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms