RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	SLAIN1	Q8ND83	568 aa		13.01	□□□□□ -0.33
PSMC6-208	ENST00000554956	TSHZ2	Q9NRE2	1034 aa		12.99	□□□□□ -0.33
PSMC6-208	ENST00000554956	C2orf72	A6NCS6	295 aa		12.94	□□□□□ -0.34
PSMC6-208	ENST00000554956	NCKAP5L	Q9HCH0	1330 aa		12.93	□□□□□ -0.34
PSMC6-208	ENST00000554956	KIF3C	O14782	793 aa		12.92	□□□□□ -0.34
PSMC6-208	ENST00000554956	HAP1	P54257	671 aa	Predicted RBP	12.92	□□□□□ -0.34
PSMC6-208	ENST00000554956	TMC2	Q8TDI7	906 aa		12.92	□□□□□ -0.34
PSMC6-208	ENST00000554956	CRISPLD2	Q9H0B8	497 aa		12.91	□□□□□ -0.34
PSMC6-208	ENST00000554956	GPHN	Q9NQX3	736 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMC6-208	ENST00000554956	LARP6	Q9BRS8	491 aa	Known RBP	12.86	□□□□□ -0.35
PSMC6-208	ENST00000554956	DSG2	Q14126	1118 aa		12.85	□□□□□ -0.35
PSMC6-208	ENST00000554956	PDE4A	P27815	886 aa		12.84	□□□□□ -0.35
PSMC6-208	ENST00000554956	FOXK1	P85037	733 aa		12.81	□□□□□ -0.36
PSMC6-208	ENST00000554956	PPP1R15B	Q5SWA1	713 aa		12.8	□□□□□ -0.36
PSMC6-208	ENST00000554956	PLPP6	Q8IY26	295 aa		12.8	□□□□□ -0.36
PSMC6-208	ENST00000554956	HOXB3	P14651	431 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMC6-208	ENST00000554956	MFSD10	Q14728	455 aa		12.79	□□□□□ -0.36
PSMC6-208	ENST00000554956	DDX27	Q96GQ7	796 aa	Known RBP	12.79	□□□□□ -0.36
PSMC6-208	ENST00000554956	SNPH	O15079	494 aa		12.72	□□□□□ -0.37
PSMC6-208	ENST00000554956	KDM2A	Q9Y2K7	1162 aa		12.72	□□□□□ -0.37
PSMC6-208	ENST00000554956	DOK7	Q18PE1	504 aa		12.71	□□□□□ -0.37
PSMC6-208	ENST00000554956	FAM163A	Q96GL9	167 aa	Predicted RBP	12.71	□□□□□ -0.37
PSMC6-208	ENST00000554956	LCE2D	Q5TA82	110 aa	Predicted RBP	12.69	□□□□□ -0.38
PSMC6-208	ENST00000554956	WDR70	Q9NW82	654 aa		12.69	□□□□□ -0.38
PSMC6-208	ENST00000554956	ST18	O60284	1047 aa		12.67	□□□□□ -0.38
PSMC6-208	ENST00000554956	ZNF710	Q8N1W2	664 aa		12.67	□□□□□ -0.38
PSMC6-208	ENST00000554956	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
PSMC6-208	ENST00000554956	EMILIN3	Q9NT22	766 aa		12.66	□□□□□ -0.38
PSMC6-208	ENST00000554956	SLC34A2	O95436	690 aa		12.64	□□□□□ -0.39
PSMC6-208	ENST00000554956	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.64	□□□□□ -0.39
PSMC6-208	ENST00000554956	RIMBP2	O15034	1052 aa		12.63	□□□□□ -0.39
PSMC6-208	ENST00000554956	CAMK2B	Q13554	666 aa		12.63	□□□□□ -0.39
PSMC6-208	ENST00000554956	ARSI	Q5FYB1	569 aa		12.63	□□□□□ -0.39
PSMC6-208	ENST00000554956	VSIG10	Q8N0Z9	540 aa		12.63	□□□□□ -0.39
PSMC6-208	ENST00000554956	E2F4	Q16254	413 aa		12.62	□□□□□ -0.39
PSMC6-208	ENST00000554956	PCDHGA4	Q9Y5G9	962 aa		12.62	□□□□□ -0.39
PSMC6-208	ENST00000554956	GPR153	Q6NV75	609 aa		12.61	□□□□□ -0.39
PSMC6-208	ENST00000554956	OXER1	Q8TDS5	423 aa		12.61	□□□□□ -0.39
PSMC6-208	ENST00000554956	PTCD2	Q8WV60	388 aa	Known RBP	12.6	□□□□□ -0.39
PSMC6-208	ENST00000554956	SLC24A1	O60721	1099 aa		12.59	□□□□□ -0.39
PSMC6-208	ENST00000554956	MARVELD3	Q96A59	401 aa		12.58	□□□□□ -0.4
PSMC6-208	ENST00000554956	ZSWIM6	Q9HCJ5	1215 aa		12.58	□□□□□ -0.4
PSMC6-208	ENST00000554956	HOXB1	P14653	301 aa	Predicted RBP	12.57	□□□□□ -0.4
PSMC6-208	ENST00000554956	KCNV2	Q8TDN2	545 aa		12.57	□□□□□ -0.4
PSMC6-208	ENST00000554956	DPYSL4	O14531	572 aa		12.56	□□□□□ -0.4
PSMC6-208	ENST00000554956	NUDT7	P0C024	238 aa		12.56	□□□□□ -0.4
PSMC6-208	ENST00000554956	MAP3K9	P80192	1104 aa		12.53	□□□□□ -0.4
PSMC6-208	ENST00000554956	TBC1D12	O60347	775 aa		12.51	□□□□□ -0.41
PSMC6-208	ENST00000554956	EMP3	P54852	163 aa		12.51	□□□□□ -0.41
PSMC6-208	ENST00000554956	KDM4F	A0A1W2PPD8	638 aa		12.5	□□□□□ -0.41
PSMC6-208	ENST00000554956	EVI5	O60447	810 aa		12.48	□□□□□ -0.41
PSMC6-208	ENST00000554956	P3H3	Q8IVL6	736 aa		12.47	□□□□□ -0.41
PSMC6-208	ENST00000554956	LHX6	Q9UPM6	363 aa		12.46	□□□□□ -0.41
PSMC6-208	ENST00000554956	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.46	□□□□□ -0.41
PSMC6-208	ENST00000554956	FAM205C	A6NFA0	338 aa		12.45	□□□□□ -0.42
PSMC6-208	ENST00000554956	POTEB3	A0JP26	581 aa		12.44	□□□□□ -0.42
PSMC6-208	ENST00000554956	POTEB	Q6S5H4	581 aa		12.44	□□□□□ -0.42
PSMC6-208	ENST00000554956	POTEG	Q6S5H5	508 aa		12.44	□□□□□ -0.42
PSMC6-208	ENST00000554956	ARHGEF1	Q92888	912 aa	Known RBP	12.44	□□□□□ -0.42
PSMC6-208	ENST00000554956	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.43	□□□□□ -0.42
PSMC6-208	ENST00000554956	POTEM	A6NI47	508 aa		12.43	□□□□□ -0.42
PSMC6-208	ENST00000554956	ERBB3	P21860	1342 aa		12.42	□□□□□ -0.42
PSMC6-208	ENST00000554956	PDIA6	Q15084	440 aa		12.42	□□□□□ -0.42
PSMC6-208	ENST00000554956	VARS2	Q5ST30	1063 aa	Known RBP	12.41	□□□□□ -0.42
PSMC6-208	ENST00000554956	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.41	□□□□□ -0.42
PSMC6-208	ENST00000554956	HS3ST6	Q96QI5	342 aa		12.4	□□□□□ -0.42
PSMC6-208	ENST00000554956	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.38	□□□□□ -0.43
PSMC6-208	ENST00000554956	DDX12P	Q92771	950 aa		12.36	□□□□□ -0.43
PSMC6-208	ENST00000554956	ZNF454	Q8N9F8	522 aa		12.34	□□□□□ -0.43
PSMC6-208	ENST00000554956	SEMA3E	O15041	775 aa		12.33	□□□□□ -0.44
PSMC6-208	ENST00000554956	FOSB	P53539	338 aa		12.33	□□□□□ -0.44
PSMC6-208	ENST00000554956	JPH4	Q96JJ6	628 aa		12.32	□□□□□ -0.44
PSMC6-208	ENST00000554956	MLLT3	P42568	568 aa	Predicted RBP	12.31	□□□□□ -0.44
PSMC6-208	ENST00000554956	PTGER2	P43116	358 aa		12.31	□□□□□ -0.44
PSMC6-208	ENST00000554956	PCDHGA10	Q9Y5H3	936 aa		12.31	□□□□□ -0.44
PSMC6-208	ENST00000554956	GRXCR2	A6NFK2	248 aa		12.3	□□□□□ -0.44
PSMC6-208	ENST00000554956	PPP4R3B	Q5MIZ7	849 aa		12.29	□□□□□ -0.44
PSMC6-208	ENST00000554956	NISCH	Q9Y2I1	1504 aa		12.28	□□□□□ -0.44
PSMC6-208	ENST00000554956	PSD	A5PKW4	1024 aa	Predicted RBP	12.28	□□□□□ -0.44
PSMC6-208	ENST00000554956	PHF14	O94880	888 aa		12.27	□□□□□ -0.45
PSMC6-208	ENST00000554956	NBR1	Q14596	966 aa		12.27	□□□□□ -0.45
PSMC6-208	ENST00000554956	PRIM1	P49642	420 aa	Known RBP	12.26	□□□□□ -0.45
PSMC6-208	ENST00000554956	ZNF687	Q8N1G0	1237 aa		12.26	□□□□□ -0.45
PSMC6-208	ENST00000554956	POTEE	Q6S8J3	1075 aa		12.25	□□□□□ -0.45
PSMC6-208	ENST00000554956	CDAN1	Q8IWY9	1227 aa		12.25	□□□□□ -0.45
PSMC6-208	ENST00000554956	ZDHHC16	Q969W1	377 aa		12.25	□□□□□ -0.45
PSMC6-208	ENST00000554956	ADAM33	Q9BZ11	813 aa		12.25	□□□□□ -0.45
PSMC6-208	ENST00000554956	TYW1B	Q6NUM6	668 aa		12.24	□□□□□ -0.45
PSMC6-208	ENST00000554956	RBM33	Q96EV2	1170 aa	Known RBP	12.24	□□□□□ -0.45
PSMC6-208	ENST00000554956	AXIN2	Q9Y2T1	843 aa		12.24	□□□□□ -0.45
PSMC6-208	ENST00000554956	TESPA1	A2RU30	521 aa	Predicted RBP	12.23	□□□□□ -0.45
PSMC6-208	ENST00000554956	EPAS1	Q99814	870 aa		12.22	□□□□□ -0.45
PSMC6-208	ENST00000554956	OSBP	P22059	807 aa		12.21	□□□□□ -0.45
PSMC6-208	ENST00000554956	KRTAP3-3	Q9BYR6	98 aa		12.2	□□□□□ -0.46
PSMC6-208	ENST00000554956	KRTAP3-2	Q9BYR7	98 aa		12.2	□□□□□ -0.46
PSMC6-208	ENST00000554956	BCL2L12	Q9HB09	334 aa		12.2	□□□□□ -0.46
PSMC6-208	ENST00000554956	PSEN2	P49810	448 aa		12.19	□□□□□ -0.46
PSMC6-208	ENST00000554956	FBXW7	Q969H0	707 aa		12.19	□□□□□ -0.46
PSMC6-208	ENST00000554956	KCNK17	Q96T54	332 aa		12.19	□□□□□ -0.46
PSMC6-208	ENST00000554956	EN1	Q05925	392 aa	Predicted RBP	12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms