RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ARHGAP5Q13017 1502 aa38.14■■■■□ 3.7
SDR39U1-209ENST00000554947 SUPT6HQ7KZ85 1726 aaKnown RBP38.14■■■■□ 3.7
SDR39U1-209ENST00000554947 APLP2Q06481 763 aa38.11■■■■□ 3.69
SDR39U1-209ENST00000554947 GPATCH8Q9UKJ3 1502 aaKnown RBP38.1■■■■□ 3.69
SDR39U1-209ENST00000554947 CCNB3Q8WWL7 1395 aa38.07■■■■□ 3.69
SDR39U1-209ENST00000554947 DENND4BO75064 1496 aaPredicted RBP38.06■■■■□ 3.68
SDR39U1-209ENST00000554947 ADGRL1O94910 1474 aa38.06■■■■□ 3.68
SDR39U1-209ENST00000554947 RICTORQ6R327 1708 aa38.04■■■■□ 3.68
SDR39U1-209ENST00000554947 ITSN2Q9NZM3 1697 aa38.04■■■■□ 3.68
SDR39U1-209ENST00000554947 NCOA2Q15596 1464 aa38.03■■■■□ 3.68
SDR39U1-209ENST00000554947 FRMPD1Q5SYB0 1578 aa38.02■■■■□ 3.68
SDR39U1-209ENST00000554947 KANK4Q5T7N3 995 aaPredicted RBP38■■■■□ 3.67
SDR39U1-209ENST00000554947 SCAPERQ9BY12 1400 aa37.99■■■■□ 3.67
SDR39U1-209ENST00000554947 RAPGEF3O95398 923 aa37.98■■■■□ 3.67
SDR39U1-209ENST00000554947 CFDP1Q9UEE9 299 aaPredicted RBP37.94■■■■□ 3.66
SDR39U1-209ENST00000554947 POGZQ7Z3K3 1410 aa37.94■■■■□ 3.66
SDR39U1-209ENST00000554947 ABCC1P33527 1531 aa37.93■■■■□ 3.66
SDR39U1-209ENST00000554947 ZMYM4Q5VZL5 1548 aa37.92■■■■□ 3.66
SDR39U1-209ENST00000554947 SAMD9LQ8IVG5 1584 aa37.9■■■■□ 3.66
SDR39U1-209ENST00000554947 PLEKHH2Q8IVE3 1493 aa37.89■■■■□ 3.66
SDR39U1-209ENST00000554947 ZNF518AQ6AHZ1 1483 aa37.88■■■■□ 3.65
SDR39U1-209ENST00000554947 MAGI2Q86UL8 1455 aa37.85■■■■□ 3.65
SDR39U1-209ENST00000554947 KIAA1107Q9UPP5 1409 aa37.85■■■■□ 3.65
SDR39U1-209ENST00000554947 KDM5CP41229 1560 aa37.83■■■■□ 3.65
SDR39U1-209ENST00000554947 ARHGEF12Q9NZN5 1544 aa37.82■■■■□ 3.65
SDR39U1-209ENST00000554947 ZNF777Q9ULD5 760 aaPredicted RBP37.82■■■■□ 3.64
SDR39U1-209ENST00000554947 SYCP2Q9BX26 1530 aa37.77■■■■□ 3.64
SDR39U1-209ENST00000554947 MYOM3Q5VTT5 1437 aa37.77■■■■□ 3.64
SDR39U1-209ENST00000554947 ARHGEF40Q8TER5 1519 aa37.77■■■■□ 3.64
SDR39U1-209ENST00000554947 TRAPPC8Q9Y2L5 1435 aa37.75■■■■□ 3.63
SDR39U1-209ENST00000554947 MIA2Q96PC5 1412 aa37.74■■■■□ 3.63
SDR39U1-209ENST00000554947 ZFYVE16Q7Z3T8 1539 aa37.73■■■■□ 3.63
SDR39U1-209ENST00000554947 AFAP1Q8N556 730 aa37.73■■■■□ 3.63
SDR39U1-209ENST00000554947 HECW2Q9P2P5 1572 aa37.71■■■■□ 3.63
SDR39U1-209ENST00000554947 MLH3Q9UHC1 1453 aa37.7■■■■□ 3.63
SDR39U1-209ENST00000554947 CAMSAP2Q08AD1 1489 aa37.69■■■■□ 3.62
SDR39U1-209ENST00000554947 ZNF644Q9H582 1327 aaPredicted RBP37.68■■■■□ 3.62
SDR39U1-209ENST00000554947 HNRNPMP52272 730 aaKnown RBP eCLIP37.68■■■■□ 3.62
SDR39U1-209ENST00000554947 MBD5Q9P267 1494 aa37.66■■■■□ 3.62
SDR39U1-209ENST00000554947 YEATS2Q9ULM3 1422 aa37.65■■■■□ 3.62
SDR39U1-209ENST00000554947 RSPH4AQ5TD94 716 aa37.62■■■■□ 3.61
SDR39U1-209ENST00000554947 KIDINS220Q9ULH0 1771 aa37.6■■■■□ 3.61
SDR39U1-209ENST00000554947 ARHGEF5Q12774 1597 aa37.59■■■■□ 3.61
SDR39U1-209ENST00000554947 ATP10AO60312 1499 aa37.58■■■■□ 3.61
SDR39U1-209ENST00000554947 FGD6Q6ZV73 1430 aa37.55■■■■□ 3.6
SDR39U1-209ENST00000554947 CCDC141Q6ZP82 1450 aa37.55■■■■□ 3.6
SDR39U1-209ENST00000554947 SPAG9O60271 1321 aaKnown RBP37.55■■■■□ 3.6
SDR39U1-209ENST00000554947 DIP2CQ9Y2E4 1556 aa37.55■■■■□ 3.6
SDR39U1-209ENST00000554947 PTPN23Q9H3S7 1636 aa37.54■■■■□ 3.6
SDR39U1-209ENST00000554947 INO80Q9ULG1 1556 aaPredicted RBP37.54■■■■□ 3.6
SDR39U1-209ENST00000554947 C9orf84Q5VXU9 1444 aa37.53■■■■□ 3.6
SDR39U1-209ENST00000554947 ABCA6Q8N139 1617 aa37.53■■■■□ 3.6
SDR39U1-209ENST00000554947 REREQ9P2R6 1566 aa37.52■■■■□ 3.6
SDR39U1-209ENST00000554947 MYT1LQ9UL68 1186 aa37.52■■■■□ 3.6
SDR39U1-209ENST00000554947 ATP7AQ04656 1500 aa37.51■■■■□ 3.6
SDR39U1-209ENST00000554947 TCOF1Q13428 1488 aaKnown RBP37.5■■■■□ 3.59
SDR39U1-209ENST00000554947 RTEL1-TNFRSF6BF6WH68 1400 aa37.49■■■■□ 3.59
SDR39U1-209ENST00000554947 KDM4FA0A1W2PPD8 638 aa37.45■■■■□ 3.59
SDR39U1-209ENST00000554947 SIGLEC1Q9BZZ2 1709 aa37.44■■■■□ 3.58
SDR39U1-209ENST00000554947 BCORL1Q5H9F3 1711 aa37.44■■■■□ 3.58
SDR39U1-209ENST00000554947 ARID4BQ4LE39 1312 aaPredicted RBP37.41■■■■□ 3.58
SDR39U1-209ENST00000554947 MAST1Q9Y2H9 1570 aa37.39■■■■□ 3.58
SDR39U1-209ENST00000554947 TSPY4P0CV99 314 aa37.39■■■■□ 3.58
SDR39U1-209ENST00000554947 TSPY10P0CW01 314 aa37.39■■■■□ 3.58
SDR39U1-209ENST00000554947 ADGBQ8N7X0 1667 aa37.39■■■■□ 3.58
SDR39U1-209ENST00000554947 ADAMTSL3P82987 1691 aa37.37■■■■□ 3.57
SDR39U1-209ENST00000554947 AGLP35573 1532 aa37.37■■■■□ 3.57
SDR39U1-209ENST00000554947 DNMT1P26358 1616 aaKnown RBP37.35■■■■□ 3.57
SDR39U1-209ENST00000554947 CROCC2H7BZ55 1655 aa37.34■■■■□ 3.57
SDR39U1-209ENST00000554947 PPARGC1BQ86YN6 1023 aaKnown RBP37.33■■■■□ 3.57
SDR39U1-209ENST00000554947 SHANK2Q9UPX8 1470 aa37.32■■■■□ 3.56
SDR39U1-209ENST00000554947 PLXNC1O60486 1568 aa37.31■■■■□ 3.56
SDR39U1-209ENST00000554947 A2MP01023 1474 aa37.3■■■■□ 3.56
SDR39U1-209ENST00000554947 ABCC5O15440 1437 aa37.29■■■■□ 3.56
SDR39U1-209ENST00000554947 DAPK1P53355 1430 aa37.28■■■■□ 3.56
SDR39U1-209ENST00000554947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.23■■■■□ 3.55
SDR39U1-209ENST00000554947 DHX29Q7Z478 1369 aaKnown RBP37.22■■■■□ 3.55
SDR39U1-209ENST00000554947 AEBP2Q6ZN18 517 aaPredicted RBP37.22■■■■□ 3.55
SDR39U1-209ENST00000554947 MADDQ8WXG6 1647 aa37.21■■■■□ 3.55
SDR39U1-209ENST00000554947 FAM50AQ14320 339 aaKnown RBP37.21■■■■□ 3.55
SDR39U1-209ENST00000554947 FER1L4A9Z1Z3 1794 aa37.18■■■■□ 3.54
SDR39U1-209ENST00000554947 RRBP1Q9P2E9 1410 aaKnown RBP37.15■■■■□ 3.54
SDR39U1-209ENST00000554947 MLECQ14165 292 aa37.14■■■■□ 3.54
SDR39U1-209ENST00000554947 RIMS1Q86UR5 1692 aaKnown RBP37.12■■■■□ 3.53
SDR39U1-209ENST00000554947 ADGRL2O95490 1459 aa37.09■■■■□ 3.53
SDR39U1-209ENST00000554947 PTPRMP28827 1452 aa37.09■■■■□ 3.53
SDR39U1-209ENST00000554947 DUOX2Q9NRD8 1548 aa37.09■■■■□ 3.53
SDR39U1-209ENST00000554947 ANKRD30AQ9BXX3 1397 aa37.07■■■■□ 3.53
SDR39U1-209ENST00000554947 EIF2AK4Q9P2K8 1649 aaKnown RBP37.06■■■■□ 3.52
SDR39U1-209ENST00000554947 KIF15Q9NS87 1388 aa37.04■■■■□ 3.52
SDR39U1-209ENST00000554947 NCOA1Q15788 1441 aa37.04■■■■□ 3.52
SDR39U1-209ENST00000554947 PPP6R1Q9UPN7 881 aa37.03■■■■□ 3.52
SDR39U1-209ENST00000554947 CNTLNQ9NXG0 1405 aa37.01■■■■□ 3.51
SDR39U1-209ENST00000554947 CHIC2Q9UKJ5 165 aa37■■■■□ 3.51
SDR39U1-209ENST00000554947 ERBINQ96RT1 1412 aa36.99■■■■□ 3.51
SDR39U1-209ENST00000554947 KIF3BO15066 747 aa36.98■■■■□ 3.51
SDR39U1-209ENST00000554947 RRP7BPQ9NSQ0 103 aa36.98■■■■□ 3.51
SDR39U1-209ENST00000554947 PTPRKQ15262 1439 aa36.98■■■■□ 3.51
SDR39U1-209ENST00000554947 FAM135AQ9P2D6 1515 aa36.97■■■■□ 3.51
SDR39U1-209ENST00000554947 RNF17Q9BXT8 1623 aaKnown RBP36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms