RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
SYNE2-214ENST00000554928 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
SYNE2-214ENST00000554928 FRMPD1Q5SYB0 1578 aa19.59■□□□□ 0.73
SYNE2-214ENST00000554928 EHBP1L1Q8N3D4 1523 aa19.58■□□□□ 0.73
SYNE2-214ENST00000554928 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.72
SYNE2-214ENST00000554928 ARHGAP5Q13017 1502 aa19.57■□□□□ 0.72
SYNE2-214ENST00000554928 EFCAB2Q5VUJ9 269 aa19.57■□□□□ 0.72
SYNE2-214ENST00000554928 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
SYNE2-214ENST00000554928 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
SYNE2-214ENST00000554928 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
SYNE2-214ENST00000554928 PREX2Q70Z35 1606 aa19.54■□□□□ 0.72
SYNE2-214ENST00000554928 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
SYNE2-214ENST00000554928 CFAP74Q9C0B2 1584 aa19.54■□□□□ 0.72
SYNE2-214ENST00000554928 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
SYNE2-214ENST00000554928 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
SYNE2-214ENST00000554928 CDC42BPAQ5VT25 1732 aa19.54■□□□□ 0.72
SYNE2-214ENST00000554928 ARHGEF12Q9NZN5 1544 aa19.51■□□□□ 0.71
SYNE2-214ENST00000554928 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
SYNE2-214ENST00000554928 NCOA2Q15596 1464 aa19.51■□□□□ 0.71
SYNE2-214ENST00000554928 RICTORQ6R327 1708 aa19.51■□□□□ 0.71
SYNE2-214ENST00000554928 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
SYNE2-214ENST00000554928 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
SYNE2-214ENST00000554928 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
SYNE2-214ENST00000554928 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
SYNE2-214ENST00000554928 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
SYNE2-214ENST00000554928 ABCC1P33527 1531 aa19.46■□□□□ 0.71
SYNE2-214ENST00000554928 TRAPPC8Q9Y2L5 1435 aa19.46■□□□□ 0.71
SYNE2-214ENST00000554928 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
SYNE2-214ENST00000554928 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
SYNE2-214ENST00000554928 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
SYNE2-214ENST00000554928 SUPT6HQ7KZ85 1726 aaKnown RBP19.45■□□□□ 0.7
SYNE2-214ENST00000554928 ZMYM4Q5VZL5 1548 aa19.44■□□□□ 0.7
SYNE2-214ENST00000554928 KDM4FA0A1W2PPD8 638 aa19.43■□□□□ 0.7
SYNE2-214ENST00000554928 HNRNPMP52272 730 aaKnown RBP eCLIP19.42■□□□□ 0.7
SYNE2-214ENST00000554928 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
SYNE2-214ENST00000554928 APLP2Q06481 763 aa19.41■□□□□ 0.7
SYNE2-214ENST00000554928 ITSN2Q9NZM3 1697 aa19.4■□□□□ 0.7
SYNE2-214ENST00000554928 ARHGEF40Q8TER5 1519 aa19.4■□□□□ 0.7
SYNE2-214ENST00000554928 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
SYNE2-214ENST00000554928 KDM5CP41229 1560 aa19.39■□□□□ 0.69
SYNE2-214ENST00000554928 ZFYVE16Q7Z3T8 1539 aa19.38■□□□□ 0.69
SYNE2-214ENST00000554928 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
SYNE2-214ENST00000554928 KIAA1107Q9UPP5 1409 aa19.35■□□□□ 0.69
SYNE2-214ENST00000554928 SIGLEC1Q9BZZ2 1709 aa19.35■□□□□ 0.69
SYNE2-214ENST00000554928 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
SYNE2-214ENST00000554928 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
SYNE2-214ENST00000554928 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
SYNE2-214ENST00000554928 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.68
SYNE2-214ENST00000554928 MYOM3Q5VTT5 1437 aa19.33■□□□□ 0.68
SYNE2-214ENST00000554928 PLEKHH2Q8IVE3 1493 aa19.32■□□□□ 0.68
SYNE2-214ENST00000554928 MLH3Q9UHC1 1453 aa19.32■□□□□ 0.68
SYNE2-214ENST00000554928 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
SYNE2-214ENST00000554928 ABCA6Q8N139 1617 aa19.3■□□□□ 0.68
SYNE2-214ENST00000554928 MYT1LQ9UL68 1186 aa19.3■□□□□ 0.68
SYNE2-214ENST00000554928 DIP2CQ9Y2E4 1556 aa19.3■□□□□ 0.68
SYNE2-214ENST00000554928 ATP10AO60312 1499 aa19.28■□□□□ 0.68
SYNE2-214ENST00000554928 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
SYNE2-214ENST00000554928 KIDINS220Q9ULH0 1771 aa19.28■□□□□ 0.68
SYNE2-214ENST00000554928 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
SYNE2-214ENST00000554928 C9orf84Q5VXU9 1444 aa19.26■□□□□ 0.67
SYNE2-214ENST00000554928 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
SYNE2-214ENST00000554928 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
SYNE2-214ENST00000554928 ATP7AQ04656 1500 aa19.24■□□□□ 0.67
SYNE2-214ENST00000554928 FGD6Q6ZV73 1430 aa19.24■□□□□ 0.67
SYNE2-214ENST00000554928 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
SYNE2-214ENST00000554928 MLECQ14165 292 aa19.23■□□□□ 0.67
SYNE2-214ENST00000554928 BCORL1Q5H9F3 1711 aa19.22■□□□□ 0.67
SYNE2-214ENST00000554928 ADAMTSL3P82987 1691 aa19.21■□□□□ 0.67
SYNE2-214ENST00000554928 PTPN23Q9H3S7 1636 aa19.21■□□□□ 0.67
SYNE2-214ENST00000554928 ARHGEF5Q12774 1597 aa19.2■□□□□ 0.66
SYNE2-214ENST00000554928 REREQ9P2R6 1566 aa19.19■□□□□ 0.66
SYNE2-214ENST00000554928 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
SYNE2-214ENST00000554928 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
SYNE2-214ENST00000554928 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
SYNE2-214ENST00000554928 ABCC5O15440 1437 aa19.16■□□□□ 0.66
SYNE2-214ENST00000554928 RSPH4AQ5TD94 716 aa19.15■□□□□ 0.66
SYNE2-214ENST00000554928 A2MP01023 1474 aa19.15■□□□□ 0.66
SYNE2-214ENST00000554928 AGLP35573 1532 aa19.14■□□□□ 0.65
SYNE2-214ENST00000554928 PLXNC1O60486 1568 aa19.13■□□□□ 0.65
SYNE2-214ENST00000554928 PTPRMP28827 1452 aa19.12■□□□□ 0.65
SYNE2-214ENST00000554928 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
SYNE2-214ENST00000554928 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
SYNE2-214ENST00000554928 FAM50AQ14320 339 aaKnown RBP19.12■□□□□ 0.65
SYNE2-214ENST00000554928 DAPK1P53355 1430 aa19.11■□□□□ 0.65
SYNE2-214ENST00000554928 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
SYNE2-214ENST00000554928 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
SYNE2-214ENST00000554928 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
SYNE2-214ENST00000554928 DHX29Q7Z478 1369 aaKnown RBP19.09■□□□□ 0.65
SYNE2-214ENST00000554928 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
SYNE2-214ENST00000554928 CHIC2Q9UKJ5 165 aa19.07■□□□□ 0.64
SYNE2-214ENST00000554928 CROCC2H7BZ55 1655 aa19.07■□□□□ 0.64
SYNE2-214ENST00000554928 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
SYNE2-214ENST00000554928 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
SYNE2-214ENST00000554928 FER1L4A9Z1Z3 1794 aa19.05■□□□□ 0.64
SYNE2-214ENST00000554928 CEBPAP49715 358 aaPredicted RBP19.04■□□□□ 0.64
SYNE2-214ENST00000554928 GGT6Q6P531 493 aa19.03■□□□□ 0.64
SYNE2-214ENST00000554928 RRP7BPQ9NSQ0 103 aa19.03■□□□□ 0.64
SYNE2-214ENST00000554928 KIF3BO15066 747 aa19.02■□□□□ 0.64
SYNE2-214ENST00000554928 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
SYNE2-214ENST00000554928 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms