RNA–Protein interactions for RNA: ENST00000554814.1

AL355838.1-201, humanhuman

TSL 4 BASIC

Gene AL355838.1, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355838.1-201ENST00000554814 G3V3G9 751 aa13.37□□□□□ -0.27
AL355838.1-201ENST00000554814 PPP1R37O75864 691 aa13.37□□□□□ -0.27
AL355838.1-201ENST00000554814 CHGAP10645 457 aaKnown RBP13.37□□□□□ -0.27
AL355838.1-201ENST00000554814 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
AL355838.1-201ENST00000554814 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
AL355838.1-201ENST00000554814 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
AL355838.1-201ENST00000554814 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
AL355838.1-201ENST00000554814 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
AL355838.1-201ENST00000554814 SNPHO15079 494 aa13.3□□□□□ -0.28
AL355838.1-201ENST00000554814 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
AL355838.1-201ENST00000554814 KIF3CO14782 793 aa13.25□□□□□ -0.29
AL355838.1-201ENST00000554814 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
AL355838.1-201ENST00000554814 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
AL355838.1-201ENST00000554814 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
AL355838.1-201ENST00000554814 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
AL355838.1-201ENST00000554814 C2orf72A6NCS6 295 aa13.19□□□□□ -0.3
AL355838.1-201ENST00000554814 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
AL355838.1-201ENST00000554814 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
AL355838.1-201ENST00000554814 HOXB1P14653 301 aaPredicted RBP13.13□□□□□ -0.31
AL355838.1-201ENST00000554814 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
AL355838.1-201ENST00000554814 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
AL355838.1-201ENST00000554814 EMP3P54852 163 aa13.12□□□□□ -0.31
AL355838.1-201ENST00000554814 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
AL355838.1-201ENST00000554814 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
AL355838.1-201ENST00000554814 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
AL355838.1-201ENST00000554814 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
AL355838.1-201ENST00000554814 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
AL355838.1-201ENST00000554814 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
AL355838.1-201ENST00000554814 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
AL355838.1-201ENST00000554814 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
AL355838.1-201ENST00000554814 ARSIQ5FYB1 569 aa13.03□□□□□ -0.32
AL355838.1-201ENST00000554814 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
AL355838.1-201ENST00000554814 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
AL355838.1-201ENST00000554814 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
AL355838.1-201ENST00000554814 RIMBP2O15034 1052 aa13□□□□□ -0.33
AL355838.1-201ENST00000554814 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
AL355838.1-201ENST00000554814 DSG2Q14126 1118 aa12.99□□□□□ -0.33
AL355838.1-201ENST00000554814 KRTAP3-3Q9BYR6 98 aa12.99□□□□□ -0.33
AL355838.1-201ENST00000554814 KRTAP3-2Q9BYR7 98 aa12.99□□□□□ -0.33
AL355838.1-201ENST00000554814 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
AL355838.1-201ENST00000554814 NCKAP5LQ9HCH0 1330 aa12.98□□□□□ -0.33
AL355838.1-201ENST00000554814 SLC34A2O95436 690 aa12.98□□□□□ -0.33
AL355838.1-201ENST00000554814 RYDENQ9NUL5 291 aaKnown RBP12.98□□□□□ -0.33
AL355838.1-201ENST00000554814 FOXK1P85037 733 aa12.97□□□□□ -0.33
AL355838.1-201ENST00000554814 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
AL355838.1-201ENST00000554814 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
AL355838.1-201ENST00000554814 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
AL355838.1-201ENST00000554814 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
AL355838.1-201ENST00000554814 ERBB3P21860 1342 aa12.92□□□□□ -0.34
AL355838.1-201ENST00000554814 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
AL355838.1-201ENST00000554814 NUDT7P0C024 238 aa12.9□□□□□ -0.34
AL355838.1-201ENST00000554814 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
AL355838.1-201ENST00000554814 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
AL355838.1-201ENST00000554814 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
AL355838.1-201ENST00000554814 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
AL355838.1-201ENST00000554814 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
AL355838.1-201ENST00000554814 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
AL355838.1-201ENST00000554814 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
AL355838.1-201ENST00000554814 NESP48681 1621 aa12.82□□□□□ -0.36
AL355838.1-201ENST00000554814 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
AL355838.1-201ENST00000554814 MFSD10Q14728 455 aa12.81□□□□□ -0.36
AL355838.1-201ENST00000554814 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
AL355838.1-201ENST00000554814 PDE4AP27815 886 aa12.8□□□□□ -0.36
AL355838.1-201ENST00000554814 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
AL355838.1-201ENST00000554814 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
AL355838.1-201ENST00000554814 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
AL355838.1-201ENST00000554814 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
AL355838.1-201ENST00000554814 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
AL355838.1-201ENST00000554814 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
AL355838.1-201ENST00000554814 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
AL355838.1-201ENST00000554814 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
AL355838.1-201ENST00000554814 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
AL355838.1-201ENST00000554814 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
AL355838.1-201ENST00000554814 CUX2O14529 1486 aa12.69□□□□□ -0.38
AL355838.1-201ENST00000554814 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
AL355838.1-201ENST00000554814 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.67□□□□□ -0.38
AL355838.1-201ENST00000554814 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
AL355838.1-201ENST00000554814 TBC1D12O60347 775 aa12.65□□□□□ -0.38
AL355838.1-201ENST00000554814 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
AL355838.1-201ENST00000554814 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
AL355838.1-201ENST00000554814 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
AL355838.1-201ENST00000554814 ANO8Q9HCE9 1232 aaPredicted RBP12.63□□□□□ -0.39
AL355838.1-201ENST00000554814 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
AL355838.1-201ENST00000554814 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
AL355838.1-201ENST00000554814 PBX2P40425 430 aa12.6□□□□□ -0.39
AL355838.1-201ENST00000554814 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
AL355838.1-201ENST00000554814 EVI5O60447 810 aa12.59□□□□□ -0.39
AL355838.1-201ENST00000554814 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
AL355838.1-201ENST00000554814 PSEN2P49810 448 aa12.57□□□□□ -0.4
AL355838.1-201ENST00000554814 FOSBP53539 338 aa12.57□□□□□ -0.4
AL355838.1-201ENST00000554814 DMRTA1Q5VZB9 504 aa12.57□□□□□ -0.4
AL355838.1-201ENST00000554814 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
AL355838.1-201ENST00000554814 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
AL355838.1-201ENST00000554814 ARHGAP33O14559 1287 aa12.55□□□□□ -0.4
AL355838.1-201ENST00000554814 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
AL355838.1-201ENST00000554814 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
AL355838.1-201ENST00000554814 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
AL355838.1-201ENST00000554814 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
AL355838.1-201ENST00000554814 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
AL355838.1-201ENST00000554814 DPYSL4O14531 572 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms