RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
PPP4R3A-204ENST00000554574 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
PPP4R3A-204ENST00000554574 PPP1R15BQ5SWA1 713 aa8.5□□□□□ -1.05
PPP4R3A-204ENST00000554574 C19orf67A6NJJ6 358 aa8.5□□□□□ -1.05
PPP4R3A-204ENST00000554574 TIE1P35590 1138 aa8.5□□□□□ -1.05
PPP4R3A-204ENST00000554574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.053e-9■■■□□ 14.8
PPP4R3A-204ENST00000554574 EVX2Q03828 476 aa8.48□□□□□ -1.05
PPP4R3A-204ENST00000554574 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
PPP4R3A-204ENST00000554574 BARGINQ6ZT62 677 aa8.48□□□□□ -1.05
PPP4R3A-204ENST00000554574 GPHNQ9NQX3 736 aaPredicted RBP8.48□□□□□ -1.05
PPP4R3A-204ENST00000554574 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
PPP4R3A-204ENST00000554574 BMP2KQ9NSY1 1161 aaPredicted RBP8.48□□□□□ -1.05
PPP4R3A-204ENST00000554574 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.06
PPP4R3A-204ENST00000554574 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.06
PPP4R3A-204ENST00000554574 DPYSL4O14531 572 aa8.45□□□□□ -1.06
PPP4R3A-204ENST00000554574 DSG2Q14126 1118 aa8.44□□□□□ -1.06
PPP4R3A-204ENST00000554574 GPIHBP1Q8IV16 184 aa8.44□□□□□ -1.06
PPP4R3A-204ENST00000554574 TRIM35Q9UPQ4 493 aa8.44□□□□□ -1.06
PPP4R3A-204ENST00000554574 MYO15BQ96JP2 1530 aa8.43□□□□□ -1.06
PPP4R3A-204ENST00000554574 MICALL2Q8IY33 904 aa8.42□□□□□ -1.06
PPP4R3A-204ENST00000554574 GALR2O43603 387 aaPredicted RBP8.42□□□□□ -1.06
PPP4R3A-204ENST00000554574 PDIA6Q15084 440 aa8.42□□□□□ -1.06
PPP4R3A-204ENST00000554574 AK7Q96M32 723 aa8.41□□□□□ -1.06
PPP4R3A-204ENST00000554574 PDCD7Q8N8D1 485 aaKnown RBP8.4□□□□□ -1.06
PPP4R3A-204ENST00000554574 GPBP1L1Q9HC44 474 aaPredicted RBP8.4□□□□□ -1.06
PPP4R3A-204ENST00000554574 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
PPP4R3A-204ENST00000554574 FOXK1P85037 733 aa8.39□□□□□ -1.07
PPP4R3A-204ENST00000554574 TMC2Q8TDI7 906 aa8.39□□□□□ -1.07
PPP4R3A-204ENST00000554574 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
PPP4R3A-204ENST00000554574 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
PPP4R3A-204ENST00000554574 ABCC9O60706 1549 aa8.37□□□□□ -1.07
PPP4R3A-204ENST00000554574 GPR37O15354 613 aa8.36□□□□□ -1.07
PPP4R3A-204ENST00000554574 ATN1P54259 1190 aaPredicted RBP8.35□□□□□ -1.07
PPP4R3A-204ENST00000554574 PLPP6Q8IY26 295 aa8.35□□□□□ -1.07
PPP4R3A-204ENST00000554574 NACADO15069 1562 aa8.35□□□□□ -1.07
PPP4R3A-204ENST00000554574 C2orf72A6NCS6 295 aa8.35□□□□□ -1.07
PPP4R3A-204ENST00000554574 TRIM66O15016 1216 aa8.35□□□□□ -1.07
PPP4R3A-204ENST00000554574 IRX5P78411 483 aaPredicted RBP8.35□□□□□ -1.07
PPP4R3A-204ENST00000554574 KIF3CO14782 793 aa8.34□□□□□ -1.07
PPP4R3A-204ENST00000554574 TMEM121BQ9BXQ6 578 aaPredicted RBP8.34□□□□□ -1.07
PPP4R3A-204ENST00000554574 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
PPP4R3A-204ENST00000554574 ARXQ96QS3 562 aa8.33□□□□□ -1.08
PPP4R3A-204ENST00000554574 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
PPP4R3A-204ENST00000554574 PDE4DQ08499 809 aa8.32□□□□□ -1.08
PPP4R3A-204ENST00000554574 IL27Q8NEV9 243 aa8.31□□□□□ -1.08
PPP4R3A-204ENST00000554574 ATMINO43313 823 aaPredicted RBP8.31□□□□□ -1.08
PPP4R3A-204ENST00000554574 LHX8Q68G74 356 aa8.31□□□□□ -1.08
PPP4R3A-204ENST00000554574 OCEL1Q9H607 264 aa8.31□□□□□ -1.08
PPP4R3A-204ENST00000554574 GRXCR2A6NFK2 248 aa8.3□□□□□ -1.08
PPP4R3A-204ENST00000554574 ASTLQ6HA08 431 aaPredicted RBP8.29□□□□□ -1.08
PPP4R3A-204ENST00000554574 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
PPP4R3A-204ENST00000554574 IER5LQ5T953 404 aa8.28□□□□□ -1.08
PPP4R3A-204ENST00000554574 UPF1Q92900 1129 aaKnown RBP eCLIP8.28□□□□□ -1.08
PPP4R3A-204ENST00000554574 TMEM92Q6UXU6 159 aa8.27□□□□□ -1.09
PPP4R3A-204ENST00000554574 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
PPP4R3A-204ENST00000554574 G3V3G9 751 aa8.27□□□□□ -1.09
PPP4R3A-204ENST00000554574 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
PPP4R3A-204ENST00000554574 OSBPP22059 807 aa8.26□□□□□ -1.09
PPP4R3A-204ENST00000554574 RB1CC1Q8TDY2 1594 aa8.26□□□□□ -1.09
PPP4R3A-204ENST00000554574 CLCN6P51797 869 aa8.25□□□□□ -1.09
PPP4R3A-204ENST00000554574 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
PPP4R3A-204ENST00000554574 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
PPP4R3A-204ENST00000554574 PLCG2P16885 1265 aa8.25□□□□□ -1.09
PPP4R3A-204ENST00000554574 OXER1Q8TDS5 423 aa8.25□□□□□ -1.09
PPP4R3A-204ENST00000554574 DAXXQ9UER7 740 aaPredicted RBP8.25□□□□□ -1.09
PPP4R3A-204ENST00000554574 SCRIBQ14160 1630 aa8.24□□□□□ -1.09
PPP4R3A-204ENST00000554574 MAP2K5Q13163 448 aa8.24□□□□□ -1.09
PPP4R3A-204ENST00000554574 GABBR2O75899 941 aa8.23□□□□□ -1.09
PPP4R3A-204ENST00000554574 DDX12PQ92771 950 aa8.23□□□□□ -1.09
PPP4R3A-204ENST00000554574 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
PPP4R3A-204ENST00000554574 IRF6O14896 467 aa8.22□□□□□ -1.09
PPP4R3A-204ENST00000554574 FECHP22830 423 aa8.22□□□□□ -1.09
PPP4R3A-204ENST00000554574 PTGER2P43116 358 aa8.22□□□□□ -1.09
PPP4R3A-204ENST00000554574 PRIM1P49642 420 aaKnown RBP8.22□□□□□ -1.09
PPP4R3A-204ENST00000554574 GNPATO15228 680 aa8.21□□□□□ -1.09
PPP4R3A-204ENST00000554574 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
PPP4R3A-204ENST00000554574 L3MBTL3Q96JM7 780 aaPredicted RBP8.21□□□□□ -1.1
PPP4R3A-204ENST00000554574 AMHR2Q16671 573 aa8.2□□□□□ -1.1
PPP4R3A-204ENST00000554574 PARP9Q8IXQ6 854 aa8.2□□□□□ -1.1
PPP4R3A-204ENST00000554574 COLQQ9Y215 455 aaPredicted RBP8.2□□□□□ -1.1
PPP4R3A-204ENST00000554574 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
PPP4R3A-204ENST00000554574 FCHSD2O94868 740 aa8.19□□□□□ -1.1
PPP4R3A-204ENST00000554574 HIC1Q14526 733 aa8.19□□□□□ -1.1
PPP4R3A-204ENST00000554574 EVI5O60447 810 aa8.19□□□□□ -1.1
PPP4R3A-204ENST00000554574 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
PPP4R3A-204ENST00000554574 PELP1Q8IZL8 1130 aaKnown RBP8.18□□□□□ -1.1
PPP4R3A-204ENST00000554574 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
PPP4R3A-204ENST00000554574 TBC1D12O60347 775 aa8.16□□□□□ -1.1
PPP4R3A-204ENST00000554574 SEC24BO95487 1268 aa8.15□□□□□ -1.1
PPP4R3A-204ENST00000554574 PTGDRQ13258 359 aa8.15□□□□□ -1.1
PPP4R3A-204ENST00000554574 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
PPP4R3A-204ENST00000554574 POTEFA5A3E0 1075 aa8.13□□□□□ -1.11
PPP4R3A-204ENST00000554574 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
PPP4R3A-204ENST00000554574 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
PPP4R3A-204ENST00000554574 PTCD2Q8WV60 388 aaKnown RBP8.13□□□□□ -1.11
PPP4R3A-204ENST00000554574 CDHR5Q9HBB8 845 aa8.12□□□□□ -1.11
PPP4R3A-204ENST00000554574 GIGYF2Q6Y7W6 1299 aaKnown RBP8.1□□□□□ -1.11
PPP4R3A-204ENST00000554574 ANO8Q9HCE9 1232 aaPredicted RBP8.1□□□□□ -1.11
PPP4R3A-204ENST00000554574 MS4A1P11836 297 aa8.09□□□□□ -1.11
PPP4R3A-204ENST00000554574 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms