RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HS3ST6Q96QI5 342 aa10.56□□□□□ -0.72
ATXN3-227ENST00000554491 DOK7Q18PE1 504 aa10.55□□□□□ -0.72
ATXN3-227ENST00000554491 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-227ENST00000554491 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
ATXN3-227ENST00000554491 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
ATXN3-227ENST00000554491 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
ATXN3-227ENST00000554491 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
ATXN3-227ENST00000554491 ERBB3P21860 1342 aa10.46□□□□□ -0.73
ATXN3-227ENST00000554491 MMRN1Q13201 1228 aa10.45□□□□□ -0.74
ATXN3-227ENST00000554491 PPP1R37O75864 691 aa10.44□□□□□ -0.74
ATXN3-227ENST00000554491 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
ATXN3-227ENST00000554491 ZSWIM6Q9HCJ5 1215 aa10.43□□□□□ -0.74
ATXN3-227ENST00000554491 C2orf72A6NCS6 295 aa10.42□□□□□ -0.74
ATXN3-227ENST00000554491 KIF3CO14782 793 aa10.42□□□□□ -0.74
ATXN3-227ENST00000554491 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
ATXN3-227ENST00000554491 ARSIQ5FYB1 569 aa10.41□□□□□ -0.74
ATXN3-227ENST00000554491 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATXN3-227ENST00000554491 HS6ST3Q8IZP7 471 aa10.39□□□□□ -0.75
ATXN3-227ENST00000554491 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
ATXN3-227ENST00000554491 TMC2Q8TDI7 906 aa10.34□□□□□ -0.75
ATXN3-227ENST00000554491 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-227ENST00000554491 ZNF687Q8N1G0 1237 aa10.31□□□□□ -0.76
ATXN3-227ENST00000554491 ZNF316A6NFI3 1004 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-227ENST00000554491 NUDT7P0C024 238 aa10.29□□□□□ -0.76
ATXN3-227ENST00000554491 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
ATXN3-227ENST00000554491 SLC34A2O95436 690 aa10.26□□□□□ -0.77
ATXN3-227ENST00000554491 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
ATXN3-227ENST00000554491 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
ATXN3-227ENST00000554491 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-227ENST00000554491 FOXK1P85037 733 aa10.21□□□□□ -0.77
ATXN3-227ENST00000554491 DSG2Q14126 1118 aa10.21□□□□□ -0.77
ATXN3-227ENST00000554491 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
ATXN3-227ENST00000554491 ANKRD13DQ6ZTN6 518 aa10.18□□□□□ -0.78
ATXN3-227ENST00000554491 KDM4FA0A1W2PPD8 638 aa10.17□□□□□ -0.78
ATXN3-227ENST00000554491 POTEEQ6S8J3 1075 aa10.17□□□□□ -0.78
ATXN3-227ENST00000554491 PTCD2Q8WV60 388 aaKnown RBP10.17□□□□□ -0.78
ATXN3-227ENST00000554491 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
ATXN3-227ENST00000554491 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
ATXN3-227ENST00000554491 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
ATXN3-227ENST00000554491 LSM11P83369 360 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATXN3-227ENST00000554491 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-227ENST00000554491 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
ATXN3-227ENST00000554491 DCAF8L2P0C7V8 631 aa10.12□□□□□ -0.79
ATXN3-227ENST00000554491 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
ATXN3-227ENST00000554491 PBX2P40425 430 aa10.11□□□□□ -0.79
ATXN3-227ENST00000554491 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
ATXN3-227ENST00000554491 UPF1Q92900 1129 aaKnown RBP eCLIP10.08□□□□□ -0.8
ATXN3-227ENST00000554491 PTGER2P43116 358 aa10.07□□□□□ -0.8
ATXN3-227ENST00000554491 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
ATXN3-227ENST00000554491 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
ATXN3-227ENST00000554491 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-227ENST00000554491 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
ATXN3-227ENST00000554491 TBC1D12O60347 775 aa10.05□□□□□ -0.8
ATXN3-227ENST00000554491 PSEN2P49810 448 aa10.04□□□□□ -0.8
ATXN3-227ENST00000554491 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
ATXN3-227ENST00000554491 PDE4AP27815 886 aa10.02□□□□□ -0.81
ATXN3-227ENST00000554491 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
ATXN3-227ENST00000554491 ADGRD1Q6QNK2 874 aa10.01□□□□□ -0.81
ATXN3-227ENST00000554491 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
ATXN3-227ENST00000554491 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
ATXN3-227ENST00000554491 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
ATXN3-227ENST00000554491 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
ATXN3-227ENST00000554491 ZNF454Q8N9F8 522 aa9.96□□□□□ -0.82
ATXN3-227ENST00000554491 MFSD10Q14728 455 aa9.95□□□□□ -0.82
ATXN3-227ENST00000554491 TK2O00142 265 aa9.94□□□□□ -0.82
ATXN3-227ENST00000554491 HRO43593 1189 aa9.94□□□□□ -0.82
ATXN3-227ENST00000554491 EVI5O60447 810 aa9.93□□□□□ -0.82
ATXN3-227ENST00000554491 FOSBP53539 338 aa9.93□□□□□ -0.82
ATXN3-227ENST00000554491 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
ATXN3-227ENST00000554491 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-227ENST00000554491 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
ATXN3-227ENST00000554491 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
ATXN3-227ENST00000554491 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
ATXN3-227ENST00000554491 KCNH8Q96L42 1107 aa9.88□□□□□ -0.83
ATXN3-227ENST00000554491 VPS9D1Q9Y2B5 631 aa9.88□□□□□ -0.83
ATXN3-227ENST00000554491 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
ATXN3-227ENST00000554491 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
ATXN3-227ENST00000554491 KCTD12Q96CX2 325 aaKnown RBP9.85□□□□□ -0.83
ATXN3-227ENST00000554491 PTPREP23469 700 aa9.84□□□□□ -0.83
ATXN3-227ENST00000554491 BBXQ8WY36 941 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-227ENST00000554491 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
ATXN3-227ENST00000554491 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
ATXN3-227ENST00000554491 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
ATXN3-227ENST00000554491 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
ATXN3-227ENST00000554491 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
ATXN3-227ENST00000554491 CAMK2BQ13554 666 aa9.8□□□□□ -0.84
ATXN3-227ENST00000554491 RTN4Q9NQC3 1192 aaKnown RBP9.8□□□□□ -0.84
ATXN3-227ENST00000554491 PLA2G2EQ9NZK7 142 aa9.8□□□□□ -0.84
ATXN3-227ENST00000554491 BHMG1C9JSJ3 638 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-227ENST00000554491 DPYSL4O14531 572 aa9.79□□□□□ -0.84
ATXN3-227ENST00000554491 COL9A1P20849 921 aa9.76□□□□□ -0.85
ATXN3-227ENST00000554491 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-227ENST00000554491 SPRYD3Q8NCJ5 442 aa9.75□□□□□ -0.85
ATXN3-227ENST00000554491 PTPN5P54829 565 aa9.74□□□□□ -0.85
ATXN3-227ENST00000554491 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
ATXN3-227ENST00000554491 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
ATXN3-227ENST00000554491 PHF14O94880 888 aa9.73□□□□□ -0.85
ATXN3-227ENST00000554491 MRPL50Q8N5N7 158 aaKnown RBP9.73□□□□□ -0.85
ATXN3-227ENST00000554491 PPP1R3GB7ZBB8 358 aa9.72□□□□□ -0.85
ATXN3-227ENST00000554491 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms