RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
CHD8-207ENST00000554384 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
CHD8-207ENST00000554384 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
CHD8-207ENST00000554384 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
CHD8-207ENST00000554384 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
CHD8-207ENST00000554384 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
CHD8-207ENST00000554384 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
CHD8-207ENST00000554384 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
CHD8-207ENST00000554384 SOX12O15370 315 aa11.98□□□□□ -0.49
CHD8-207ENST00000554384 NLRP6P59044 892 aa11.98□□□□□ -0.49
CHD8-207ENST00000554384 SNPHO15079 494 aa11.97□□□□□ -0.49
CHD8-207ENST00000554384 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.49
CHD8-207ENST00000554384 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
CHD8-207ENST00000554384 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
CHD8-207ENST00000554384 BOLA1Q9Y3E2 137 aa11.89□□□□□ -0.51
CHD8-207ENST00000554384 NBR1Q14596 966 aa11.87□□□□□ -0.51
CHD8-207ENST00000554384 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
CHD8-207ENST00000554384 TPRNQ4KMQ1 711 aa11.84□□□□□ -0.51
CHD8-207ENST00000554384 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
CHD8-207ENST00000554384 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
CHD8-207ENST00000554384 G3V3G9 751 aa11.82□□□□□ -0.52
CHD8-207ENST00000554384 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
CHD8-207ENST00000554384 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
CHD8-207ENST00000554384 HOXB3P14651 431 aaPredicted RBP11.8□□□□□ -0.52
CHD8-207ENST00000554384 EMP3P54852 163 aa11.8□□□□□ -0.52
CHD8-207ENST00000554384 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
CHD8-207ENST00000554384 SPNS2Q8IVW8 549 aa11.76□□□□□ -0.53
CHD8-207ENST00000554384 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
CHD8-207ENST00000554384 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
CHD8-207ENST00000554384 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
CHD8-207ENST00000554384 TMEM92Q6UXU6 159 aa11.74□□□□□ -0.53
CHD8-207ENST00000554384 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
CHD8-207ENST00000554384 P3H3Q8IVL6 736 aa11.71□□□□□ -0.53
CHD8-207ENST00000554384 KRTAP3-3Q9BYR6 98 aa11.7□□□□□ -0.54
CHD8-207ENST00000554384 KRTAP3-2Q9BYR7 98 aa11.7□□□□□ -0.54
CHD8-207ENST00000554384 CRISPLD2Q9H0B8 497 aa11.7□□□□□ -0.54
CHD8-207ENST00000554384 PDE4AP27815 886 aa11.69□□□□□ -0.54
CHD8-207ENST00000554384 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
CHD8-207ENST00000554384 E2F4Q16254 413 aa11.68□□□□□ -0.54
CHD8-207ENST00000554384 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
CHD8-207ENST00000554384 ZNF710Q8N1W2 664 aa11.66□□□□□ -0.54
CHD8-207ENST00000554384 MFSD10Q14728 455 aa11.65□□□□□ -0.54
CHD8-207ENST00000554384 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
CHD8-207ENST00000554384 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
CHD8-207ENST00000554384 SEMA3EO15041 775 aa11.59□□□□□ -0.55
CHD8-207ENST00000554384 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
CHD8-207ENST00000554384 ERBB3P21860 1342 aa11.59□□□□□ -0.55
CHD8-207ENST00000554384 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
CHD8-207ENST00000554384 DSG2Q14126 1118 aa11.56□□□□□ -0.56
CHD8-207ENST00000554384 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
CHD8-207ENST00000554384 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
CHD8-207ENST00000554384 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
CHD8-207ENST00000554384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHD8-207ENST00000554384 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
CHD8-207ENST00000554384 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
CHD8-207ENST00000554384 LMOD2Q6P5Q4 547 aa11.52□□□□□ -0.57
CHD8-207ENST00000554384 C2orf72A6NCS6 295 aa11.51□□□□□ -0.57
CHD8-207ENST00000554384 TMC2Q8TDI7 906 aa11.51□□□□□ -0.57
CHD8-207ENST00000554384 EMILIN3Q9NT22 766 aa11.51□□□□□ -0.57
CHD8-207ENST00000554384 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
CHD8-207ENST00000554384 ARSIQ5FYB1 569 aa11.49□□□□□ -0.57
CHD8-207ENST00000554384 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD8-207ENST00000554384 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
CHD8-207ENST00000554384 DPYSL4O14531 572 aa11.46□□□□□ -0.57
CHD8-207ENST00000554384 KIF3CO14782 793 aa11.46□□□□□ -0.57
CHD8-207ENST00000554384 FOXK1P85037 733 aa11.46□□□□□ -0.57
CHD8-207ENST00000554384 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
CHD8-207ENST00000554384 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
CHD8-207ENST00000554384 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
CHD8-207ENST00000554384 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
CHD8-207ENST00000554384 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
CHD8-207ENST00000554384 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
CHD8-207ENST00000554384 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD8-207ENST00000554384 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
CHD8-207ENST00000554384 NUDT7P0C024 238 aa11.34□□□□□ -0.59
CHD8-207ENST00000554384 PDIA6Q15084 440 aa11.32□□□□□ -0.6
CHD8-207ENST00000554384 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
CHD8-207ENST00000554384 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
CHD8-207ENST00000554384 SMYD5Q6GMV2 418 aa11.31□□□□□ -0.6
CHD8-207ENST00000554384 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
CHD8-207ENST00000554384 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
CHD8-207ENST00000554384 SLC34A2O95436 690 aa11.3□□□□□ -0.6
CHD8-207ENST00000554384 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
CHD8-207ENST00000554384 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
CHD8-207ENST00000554384 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
CHD8-207ENST00000554384 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
CHD8-207ENST00000554384 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
CHD8-207ENST00000554384 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
CHD8-207ENST00000554384 SLC24A3Q9HC58 644 aa11.26□□□□□ -0.61
CHD8-207ENST00000554384 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD8-207ENST00000554384 AXIN2Q9Y2T1 843 aa11.24□□□□□ -0.61
CHD8-207ENST00000554384 ZMYND10O75800 440 aa11.23□□□□□ -0.61
CHD8-207ENST00000554384 DDX12PQ92771 950 aa11.22□□□□□ -0.61
CHD8-207ENST00000554384 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
CHD8-207ENST00000554384 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
CHD8-207ENST00000554384 EVI5O60447 810 aa11.2□□□□□ -0.62
CHD8-207ENST00000554384 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
CHD8-207ENST00000554384 PTGER2P43116 358 aa11.19□□□□□ -0.62
CHD8-207ENST00000554384 OSBPP22059 807 aa11.18□□□□□ -0.62
CHD8-207ENST00000554384 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms