RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.76□□□□□ -0.69
MTHFD1-206ENST00000554353 IER5LQ5T953 404 aa10.74□□□□□ -0.69
MTHFD1-206ENST00000554353 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
MTHFD1-206ENST00000554353 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
MTHFD1-206ENST00000554353 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
MTHFD1-206ENST00000554353 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
MTHFD1-206ENST00000554353 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
MTHFD1-206ENST00000554353 DPY19L2Q6NUT2 758 aa10.66□□□□□ -0.7
MTHFD1-206ENST00000554353 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
MTHFD1-206ENST00000554353 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
MTHFD1-206ENST00000554353 SEC24BO95487 1268 aa10.65□□□□□ -0.7
MTHFD1-206ENST00000554353 PDE4AP27815 886 aa10.65□□□□□ -0.7
MTHFD1-206ENST00000554353 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-206ENST00000554353 NCKAP5LQ9HCH0 1330 aa10.64□□□□□ -0.71
MTHFD1-206ENST00000554353 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
MTHFD1-206ENST00000554353 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
MTHFD1-206ENST00000554353 PLCG2P16885 1265 aa10.62□□□□□ -0.71
MTHFD1-206ENST00000554353 E2F4Q16254 413 aa10.61□□□□□ -0.71
MTHFD1-206ENST00000554353 ST18O60284 1047 aa10.6□□□□□ -0.71
MTHFD1-206ENST00000554353 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
MTHFD1-206ENST00000554353 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-206ENST00000554353 G3V3G9 751 aa10.57□□□□□ -0.72
MTHFD1-206ENST00000554353 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
MTHFD1-206ENST00000554353 MFSD10Q14728 455 aa10.56□□□□□ -0.72
MTHFD1-206ENST00000554353 BOLA1Q9Y3E2 137 aa10.55□□□□□ -0.72
MTHFD1-206ENST00000554353 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-206ENST00000554353 GPHNQ9NQX3 736 aaPredicted RBP10.52□□□□□ -0.73
MTHFD1-206ENST00000554353 PPP1R15BQ5SWA1 713 aa10.51□□□□□ -0.73
MTHFD1-206ENST00000554353 TMC2Q8TDI7 906 aa10.51□□□□□ -0.73
MTHFD1-206ENST00000554353 L3MBTL3Q96JM7 780 aaPredicted RBP10.49□□□□□ -0.73
MTHFD1-206ENST00000554353 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-206ENST00000554353 DSG2Q14126 1118 aa10.47□□□□□ -0.73
MTHFD1-206ENST00000554353 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
MTHFD1-206ENST00000554353 C2orf72A6NCS6 295 aa10.44□□□□□ -0.74
MTHFD1-206ENST00000554353 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-206ENST00000554353 SEMA3EO15041 775 aa10.44□□□□□ -0.74
MTHFD1-206ENST00000554353 FOXK1P85037 733 aa10.42□□□□□ -0.74
MTHFD1-206ENST00000554353 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
MTHFD1-206ENST00000554353 PLPP6Q8IY26 295 aa10.41□□□□□ -0.74
MTHFD1-206ENST00000554353 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
MTHFD1-206ENST00000554353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
MTHFD1-206ENST00000554353 ARIH1Q9Y4X5 557 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-206ENST00000554353 TESPA1A2RU30 521 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-206ENST00000554353 DPYSL4O14531 572 aa10.38□□□□□ -0.75
MTHFD1-206ENST00000554353 KIF3CO14782 793 aa10.38□□□□□ -0.75
MTHFD1-206ENST00000554353 TMEM92Q6UXU6 159 aa10.38□□□□□ -0.75
MTHFD1-206ENST00000554353 EMILIN3Q9NT22 766 aa10.38□□□□□ -0.75
MTHFD1-206ENST00000554353 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
MTHFD1-206ENST00000554353 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
MTHFD1-206ENST00000554353 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
MTHFD1-206ENST00000554353 UPF1Q92900 1129 aaKnown RBP eCLIP10.32□□□□□ -0.76
MTHFD1-206ENST00000554353 MAP3K9P80192 1104 aa10.31□□□□□ -0.76
MTHFD1-206ENST00000554353 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
MTHFD1-206ENST00000554353 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
MTHFD1-206ENST00000554353 PDIA6Q15084 440 aa10.28□□□□□ -0.76
MTHFD1-206ENST00000554353 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
MTHFD1-206ENST00000554353 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-206ENST00000554353 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
MTHFD1-206ENST00000554353 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
MTHFD1-206ENST00000554353 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
MTHFD1-206ENST00000554353 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
MTHFD1-206ENST00000554353 GRXCR2A6NFK2 248 aa10.22□□□□□ -0.77
MTHFD1-206ENST00000554353 SNPHO15079 494 aa10.22□□□□□ -0.77
MTHFD1-206ENST00000554353 TBC1D12O60347 775 aa10.21□□□□□ -0.77
MTHFD1-206ENST00000554353 HOXB3P14651 431 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-206ENST00000554353 EVI5O60447 810 aa10.18□□□□□ -0.78
MTHFD1-206ENST00000554353 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
MTHFD1-206ENST00000554353 PTCD2Q8WV60 388 aaKnown RBP10.17□□□□□ -0.78
MTHFD1-206ENST00000554353 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-206ENST00000554353 DDX12PQ92771 950 aa10.16□□□□□ -0.78
MTHFD1-206ENST00000554353 SLC34A2O95436 690 aa10.15□□□□□ -0.78
MTHFD1-206ENST00000554353 ZMYND10O75800 440 aa10.14□□□□□ -0.79
MTHFD1-206ENST00000554353 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
MTHFD1-206ENST00000554353 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
MTHFD1-206ENST00000554353 EMP3P54852 163 aa10.12□□□□□ -0.79
MTHFD1-206ENST00000554353 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
MTHFD1-206ENST00000554353 OSBPP22059 807 aa10.11□□□□□ -0.79
MTHFD1-206ENST00000554353 PTGER2P43116 358 aa10.11□□□□□ -0.79
MTHFD1-206ENST00000554353 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
MTHFD1-206ENST00000554353 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
MTHFD1-206ENST00000554353 BARGINQ6ZT62 677 aa10.1□□□□□ -0.79
MTHFD1-206ENST00000554353 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
MTHFD1-206ENST00000554353 KRI1Q8N9T8 703 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-206ENST00000554353 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
MTHFD1-206ENST00000554353 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-206ENST00000554353 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-206ENST00000554353 GPR153Q6NV75 609 aa10.04□□□□□ -0.8
MTHFD1-206ENST00000554353 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
MTHFD1-206ENST00000554353 GPR37O15354 613 aa10.03□□□□□ -0.8
MTHFD1-206ENST00000554353 HOXB1P14653 301 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-206ENST00000554353 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
MTHFD1-206ENST00000554353 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-206ENST00000554353 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 PHF14O94880 888 aa10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 NEUROD2Q15784 382 aa10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 ARSIQ5FYB1 569 aa10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 KHSRPQ92945 711 aaKnown RBP eCLIP10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 RBM33Q96EV2 1170 aaKnown RBP10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 AK7Q96M32 723 aa10.02□□□□□ -0.81
MTHFD1-206ENST00000554353 FCHSD2O94868 740 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms