RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 FBXO41Q8TF61 875 aa16.52■□□□□ 0.24
PTPN21-204ENST00000554178 ZFYVE16Q7Z3T8 1539 aa16.51■□□□□ 0.23
PTPN21-204ENST00000554178 FANCAO15360 1455 aa16.51■□□□□ 0.23
PTPN21-204ENST00000554178 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
PTPN21-204ENST00000554178 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
PTPN21-204ENST00000554178 DENND4BO75064 1496 aaPredicted RBP16.5■□□□□ 0.23
PTPN21-204ENST00000554178 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
PTPN21-204ENST00000554178 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
PTPN21-204ENST00000554178 HECW1Q76N89 1606 aa16.48■□□□□ 0.23
PTPN21-204ENST00000554178 YEATS2Q9ULM3 1422 aa16.48■□□□□ 0.23
PTPN21-204ENST00000554178 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-204ENST00000554178 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
PTPN21-204ENST00000554178 AKNAQ7Z591 1439 aa16.47■□□□□ 0.23
PTPN21-204ENST00000554178 HSPA2P54652 639 aa16.47■□□□□ 0.23
PTPN21-204ENST00000554178 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
PTPN21-204ENST00000554178 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
PTPN21-204ENST00000554178 PREX1Q8TCU6 1659 aa16.44■□□□□ 0.22
PTPN21-204ENST00000554178 KIF14Q15058 1648 aa16.44■□□□□ 0.22
PTPN21-204ENST00000554178 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
PTPN21-204ENST00000554178 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
PTPN21-204ENST00000554178 MLECQ14165 292 aa16.41■□□□□ 0.22
PTPN21-204ENST00000554178 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
PTPN21-204ENST00000554178 POGZQ7Z3K3 1410 aa16.39■□□□□ 0.21
PTPN21-204ENST00000554178 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
PTPN21-204ENST00000554178 EEA1Q15075 1411 aa16.36■□□□□ 0.21
PTPN21-204ENST00000554178 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
PTPN21-204ENST00000554178 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
PTPN21-204ENST00000554178 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
PTPN21-204ENST00000554178 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
PTPN21-204ENST00000554178 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
PTPN21-204ENST00000554178 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.2
PTPN21-204ENST00000554178 C3P01024 1663 aa16.32■□□□□ 0.2
PTPN21-204ENST00000554178 ARHGAP5Q13017 1502 aa16.32■□□□□ 0.2
PTPN21-204ENST00000554178 C9orf84Q5VXU9 1444 aa16.32■□□□□ 0.2
PTPN21-204ENST00000554178 DIP2CQ9Y2E4 1556 aa16.32■□□□□ 0.2
PTPN21-204ENST00000554178 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-204ENST00000554178 PLCH2O75038 1416 aa16.3■□□□□ 0.2
PTPN21-204ENST00000554178 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
PTPN21-204ENST00000554178 KDM5CP41229 1560 aa16.3■□□□□ 0.2
PTPN21-204ENST00000554178 ATP10AO60312 1499 aa16.29■□□□□ 0.2
PTPN21-204ENST00000554178 PREX2Q70Z35 1606 aa16.28■□□□□ 0.2
PTPN21-204ENST00000554178 CEBPAP49715 358 aaPredicted RBP16.27■□□□□ 0.2
PTPN21-204ENST00000554178 ARHGAP35Q9NRY4 1499 aa16.27■□□□□ 0.19
PTPN21-204ENST00000554178 CDC42BPAQ5VT25 1732 aa16.26■□□□□ 0.19
PTPN21-204ENST00000554178 CERKQ8TCT0 537 aa16.26■□□□□ 0.19
PTPN21-204ENST00000554178 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
PTPN21-204ENST00000554178 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
PTPN21-204ENST00000554178 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
PTPN21-204ENST00000554178 ABCC1P33527 1531 aa16.22■□□□□ 0.19
PTPN21-204ENST00000554178 KIDINS220Q9ULH0 1771 aa16.22■□□□□ 0.19
PTPN21-204ENST00000554178 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
PTPN21-204ENST00000554178 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
PTPN21-204ENST00000554178 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
PTPN21-204ENST00000554178 UHRF1BP1Q6BDS2 1440 aa16.2■□□□□ 0.18
PTPN21-204ENST00000554178 KCNA4P22459 653 aa16.2■□□□□ 0.18
PTPN21-204ENST00000554178 SPATA31D1Q6ZQQ2 1576 aa16.2■□□□□ 0.18
PTPN21-204ENST00000554178 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
PTPN21-204ENST00000554178 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
PTPN21-204ENST00000554178 CLIP1P30622 1438 aa16.19■□□□□ 0.18
PTPN21-204ENST00000554178 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
PTPN21-204ENST00000554178 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
PTPN21-204ENST00000554178 DISP3Q9P2K9 1392 aa16.15■□□□□ 0.18
PTPN21-204ENST00000554178 CLTCQ00610 1675 aaKnown RBP16.15■□□□□ 0.18
PTPN21-204ENST00000554178 TRAPPC8Q9Y2L5 1435 aa16.15■□□□□ 0.18
PTPN21-204ENST00000554178 MROH2AA6NES4 1674 aa16.14■□□□□ 0.17
PTPN21-204ENST00000554178 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
PTPN21-204ENST00000554178 SYCP2Q9BX26 1530 aa16.13■□□□□ 0.17
PTPN21-204ENST00000554178 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
PTPN21-204ENST00000554178 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
PTPN21-204ENST00000554178 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
PTPN21-204ENST00000554178 AGLP35573 1532 aa16.11■□□□□ 0.17
PTPN21-204ENST00000554178 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
PTPN21-204ENST00000554178 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
PTPN21-204ENST00000554178 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-204ENST00000554178 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
PTPN21-204ENST00000554178 ZNF142P52746 1687 aaPredicted RBP16.09■□□□□ 0.17
PTPN21-204ENST00000554178 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
PTPN21-204ENST00000554178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPN21-204ENST00000554178 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
PTPN21-204ENST00000554178 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
PTPN21-204ENST00000554178 PTPRTO14522 1441 aa16.05■□□□□ 0.16
PTPN21-204ENST00000554178 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
PTPN21-204ENST00000554178 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
PTPN21-204ENST00000554178 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
PTPN21-204ENST00000554178 PLXNC1O60486 1568 aa16.03■□□□□ 0.16
PTPN21-204ENST00000554178 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
PTPN21-204ENST00000554178 ZNF777Q9ULD5 760 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-204ENST00000554178 CEP170BQ9Y4F5 1589 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-204ENST00000554178 POLR1AO95602 1720 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-204ENST00000554178 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
PTPN21-204ENST00000554178 CNTLNQ9NXG0 1405 aa16.01■□□□□ 0.15
PTPN21-204ENST00000554178 GPATCH8Q9UKJ3 1502 aaKnown RBP15.97■□□□□ 0.15
PTPN21-204ENST00000554178 IQSEC2Q5JU85 1478 aa15.96■□□□□ 0.14
PTPN21-204ENST00000554178 ZNF335Q9H4Z2 1342 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-204ENST00000554178 NCKAP5LQ9HCH0 1330 aa15.95■□□□□ 0.14
PTPN21-204ENST00000554178 NPATQ14207 1427 aa15.95■□□□□ 0.14
PTPN21-204ENST00000554178 SOCS7O14512 581 aa15.95■□□□□ 0.14
PTPN21-204ENST00000554178 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
PTPN21-204ENST00000554178 A2MP01023 1474 aa15.94■□□□□ 0.14
PTPN21-204ENST00000554178 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms