RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
IFT43-206ENST00000554026 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
IFT43-206ENST00000554026 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
IFT43-206ENST00000554026 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
IFT43-206ENST00000554026 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
IFT43-206ENST00000554026 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
IFT43-206ENST00000554026 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
IFT43-206ENST00000554026 HECW2Q9P2P5 1572 aa17.55■□□□□ 0.4
IFT43-206ENST00000554026 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
IFT43-206ENST00000554026 CDC42BPAQ5VT25 1732 aa17.55■□□□□ 0.4
IFT43-206ENST00000554026 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
IFT43-206ENST00000554026 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
IFT43-206ENST00000554026 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
IFT43-206ENST00000554026 DENND4BO75064 1496 aaPredicted RBP17.52■□□□□ 0.4
IFT43-206ENST00000554026 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
IFT43-206ENST00000554026 SCAPERQ9BY12 1400 aa17.49■□□□□ 0.39
IFT43-206ENST00000554026 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
IFT43-206ENST00000554026 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
IFT43-206ENST00000554026 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
IFT43-206ENST00000554026 MYOM3Q5VTT5 1437 aa17.46■□□□□ 0.39
IFT43-206ENST00000554026 ZNF518AQ6AHZ1 1483 aa17.45■□□□□ 0.38
IFT43-206ENST00000554026 ABCC1P33527 1531 aa17.45■□□□□ 0.38
IFT43-206ENST00000554026 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
IFT43-206ENST00000554026 RICTORQ6R327 1708 aa17.44■□□□□ 0.38
IFT43-206ENST00000554026 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
IFT43-206ENST00000554026 RAPGEF3O95398 923 aa17.43■□□□□ 0.38
IFT43-206ENST00000554026 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
IFT43-206ENST00000554026 SAMD9LQ8IVG5 1584 aa17.43■□□□□ 0.38
IFT43-206ENST00000554026 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
IFT43-206ENST00000554026 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
IFT43-206ENST00000554026 ILDR1Q86SU0 546 aaPredicted RBP17.39■□□□□ 0.37
IFT43-206ENST00000554026 CAMSAP2Q08AD1 1489 aa17.38■□□□□ 0.37
IFT43-206ENST00000554026 SYCP2Q9BX26 1530 aa17.38■□□□□ 0.37
IFT43-206ENST00000554026 KDM5CP41229 1560 aa17.38■□□□□ 0.37
IFT43-206ENST00000554026 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
IFT43-206ENST00000554026 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
IFT43-206ENST00000554026 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
IFT43-206ENST00000554026 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
IFT43-206ENST00000554026 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
IFT43-206ENST00000554026 MLH3Q9UHC1 1453 aa17.36■□□□□ 0.37
IFT43-206ENST00000554026 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
IFT43-206ENST00000554026 ADAMTSL3P82987 1691 aa17.35■□□□□ 0.37
IFT43-206ENST00000554026 ARHGEF5Q12774 1597 aa17.34■□□□□ 0.37
IFT43-206ENST00000554026 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
IFT43-206ENST00000554026 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
IFT43-206ENST00000554026 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
IFT43-206ENST00000554026 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.37
IFT43-206ENST00000554026 SPAG9O60271 1321 aaKnown RBP17.33■□□□□ 0.36
IFT43-206ENST00000554026 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
IFT43-206ENST00000554026 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
IFT43-206ENST00000554026 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
IFT43-206ENST00000554026 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
IFT43-206ENST00000554026 BCORL1Q5H9F3 1711 aa17.32■□□□□ 0.36
IFT43-206ENST00000554026 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
IFT43-206ENST00000554026 RTEL1-TNFRSF6BF6WH68 1400 aa17.3■□□□□ 0.36
IFT43-206ENST00000554026 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
IFT43-206ENST00000554026 ATP10AO60312 1499 aa17.29■□□□□ 0.36
IFT43-206ENST00000554026 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
IFT43-206ENST00000554026 PTPRMP28827 1452 aa17.27■□□□□ 0.36
IFT43-206ENST00000554026 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
IFT43-206ENST00000554026 C9orf84Q5VXU9 1444 aa17.27■□□□□ 0.35
IFT43-206ENST00000554026 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
IFT43-206ENST00000554026 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
IFT43-206ENST00000554026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.35
IFT43-206ENST00000554026 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
IFT43-206ENST00000554026 REREQ9P2R6 1566 aa17.25■□□□□ 0.35
IFT43-206ENST00000554026 RIMS1Q86UR5 1692 aaKnown RBP17.24■□□□□ 0.35
IFT43-206ENST00000554026 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
IFT43-206ENST00000554026 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
IFT43-206ENST00000554026 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
IFT43-206ENST00000554026 MAST1Q9Y2H9 1570 aa17.23■□□□□ 0.35
IFT43-206ENST00000554026 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
IFT43-206ENST00000554026 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
IFT43-206ENST00000554026 ABCA6Q8N139 1617 aa17.22■□□□□ 0.35
IFT43-206ENST00000554026 DAPK1P53355 1430 aa17.21■□□□□ 0.35
IFT43-206ENST00000554026 ABCC5O15440 1437 aa17.21■□□□□ 0.34
IFT43-206ENST00000554026 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
IFT43-206ENST00000554026 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
IFT43-206ENST00000554026 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
IFT43-206ENST00000554026 AGLP35573 1532 aa17.19■□□□□ 0.34
IFT43-206ENST00000554026 A2MP01023 1474 aa17.18■□□□□ 0.34
IFT43-206ENST00000554026 PLXNC1O60486 1568 aa17.17■□□□□ 0.34
IFT43-206ENST00000554026 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
IFT43-206ENST00000554026 ANKRD30AQ9BXX3 1397 aa17.16■□□□□ 0.34
IFT43-206ENST00000554026 SIGLEC1Q9BZZ2 1709 aa17.16■□□□□ 0.34
IFT43-206ENST00000554026 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
IFT43-206ENST00000554026 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
IFT43-206ENST00000554026 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
IFT43-206ENST00000554026 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
IFT43-206ENST00000554026 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
IFT43-206ENST00000554026 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
IFT43-206ENST00000554026 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
IFT43-206ENST00000554026 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
IFT43-206ENST00000554026 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
IFT43-206ENST00000554026 CHIC2Q9UKJ5 165 aa17.09■□□□□ 0.33
IFT43-206ENST00000554026 EIF2AK4Q9P2K8 1649 aaKnown RBP17.08■□□□□ 0.32
IFT43-206ENST00000554026 ERBINQ96RT1 1412 aa17.08■□□□□ 0.32
IFT43-206ENST00000554026 RRP7BPQ9NSQ0 103 aa17.08■□□□□ 0.32
IFT43-206ENST00000554026 MLECQ14165 292 aa17.07■□□□□ 0.32
IFT43-206ENST00000554026 KIF3BO15066 747 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms