RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
PRKCH-206ENST00000553830 GLI2P10070 1586 aa21.54■■□□□ 1.04
PRKCH-206ENST00000553830 MAP3K4Q9Y6R4 1608 aa21.54■■□□□ 1.04
PRKCH-206ENST00000553830 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
PRKCH-206ENST00000553830 CD109Q6YHK3 1445 aa21.53■■□□□ 1.04
PRKCH-206ENST00000553830 PLCH2O75038 1416 aa21.51■■□□□ 1.03
PRKCH-206ENST00000553830 MIA2Q96PC5 1412 aa21.51■■□□□ 1.03
PRKCH-206ENST00000553830 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
PRKCH-206ENST00000553830 CAMSAP2Q08AD1 1489 aa21.51■■□□□ 1.03
PRKCH-206ENST00000553830 ITGAEP38570 1179 aa21.5■■□□□ 1.03
PRKCH-206ENST00000553830 SAMD9LQ8IVG5 1584 aa21.49■■□□□ 1.03
PRKCH-206ENST00000553830 TRHP20396 242 aaPredicted RBP21.48■■□□□ 1.03
PRKCH-206ENST00000553830 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
PRKCH-206ENST00000553830 TCOF1Q13428 1488 aaKnown RBP21.46■■□□□ 1.03
PRKCH-206ENST00000553830 FANCAO15360 1455 aa21.45■■□□□ 1.03
PRKCH-206ENST00000553830 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
PRKCH-206ENST00000553830 ARAP3Q8WWN8 1544 aa21.45■■□□□ 1.02
PRKCH-206ENST00000553830 CFAP74Q9C0B2 1584 aa21.44■■□□□ 1.02
PRKCH-206ENST00000553830 PPRC1Q5VV67 1664 aaKnown RBP21.44■■□□□ 1.02
PRKCH-206ENST00000553830 SYCP2Q9BX26 1530 aa21.42■■□□□ 1.02
PRKCH-206ENST00000553830 ABCC1P33527 1531 aa21.39■■□□□ 1.02
PRKCH-206ENST00000553830 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.01
PRKCH-206ENST00000553830 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
PRKCH-206ENST00000553830 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
PRKCH-206ENST00000553830 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
PRKCH-206ENST00000553830 AKNAQ7Z591 1439 aa21.37■■□□□ 1.01
PRKCH-206ENST00000553830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.36■■□□□ 1.01
PRKCH-206ENST00000553830 PLEKHH2Q8IVE3 1493 aa21.36■■□□□ 1.01
PRKCH-206ENST00000553830 TEX14Q8IWB6 1497 aa21.35■■□□□ 1.01
PRKCH-206ENST00000553830 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
PRKCH-206ENST00000553830 DAPK1P53355 1430 aa21.34■■□□□ 1.01
PRKCH-206ENST00000553830 NEO1Q92859 1461 aa21.33■■□□□ 1.01
PRKCH-206ENST00000553830 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1.01
PRKCH-206ENST00000553830 ARHGEF5Q12774 1597 aa21.32■■□□□ 1
PRKCH-206ENST00000553830 ABCC5O15440 1437 aa21.32■■□□□ 1
PRKCH-206ENST00000553830 SCAPERQ9BY12 1400 aa21.32■■□□□ 1
PRKCH-206ENST00000553830 CCDC141Q6ZP82 1450 aa21.31■■□□□ 1
PRKCH-206ENST00000553830 MBD5Q9P267 1494 aa21.31■■□□□ 1
PRKCH-206ENST00000553830 PTPRKQ15262 1439 aa21.3■■□□□ 1
PRKCH-206ENST00000553830 ADGBQ8N7X0 1667 aa21.3■■□□□ 1
PRKCH-206ENST00000553830 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
PRKCH-206ENST00000553830 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
PRKCH-206ENST00000553830 C9orf84Q5VXU9 1444 aa21.25■□□□□ 0.99
PRKCH-206ENST00000553830 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
PRKCH-206ENST00000553830 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
PRKCH-206ENST00000553830 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
PRKCH-206ENST00000553830 AFAP1Q8N556 730 aa21.24■□□□□ 0.99
PRKCH-206ENST00000553830 DENND4BO75064 1496 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-206ENST00000553830 RICTORQ6R327 1708 aa21.24■□□□□ 0.99
PRKCH-206ENST00000553830 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
PRKCH-206ENST00000553830 POGZQ7Z3K3 1410 aa21.22■□□□□ 0.99
PRKCH-206ENST00000553830 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
PRKCH-206ENST00000553830 RAPGEF3O95398 923 aa21.22■□□□□ 0.99
PRKCH-206ENST00000553830 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
PRKCH-206ENST00000553830 ZNF518AQ6AHZ1 1483 aa21.2■□□□□ 0.98
PRKCH-206ENST00000553830 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
PRKCH-206ENST00000553830 MAST1Q9Y2H9 1570 aa21.19■□□□□ 0.98
PRKCH-206ENST00000553830 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
PRKCH-206ENST00000553830 GCC2Q8IWJ2 1684 aa21.18■□□□□ 0.98
PRKCH-206ENST00000553830 ATP7AQ04656 1500 aa21.17■□□□□ 0.98
PRKCH-206ENST00000553830 INO80Q9ULG1 1556 aaPredicted RBP21.17■□□□□ 0.98
PRKCH-206ENST00000553830 KDM5CP41229 1560 aa21.16■□□□□ 0.98
PRKCH-206ENST00000553830 HECW2Q9P2P5 1572 aa21.16■□□□□ 0.98
PRKCH-206ENST00000553830 ZFYVE16Q7Z3T8 1539 aa21.16■□□□□ 0.98
PRKCH-206ENST00000553830 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
PRKCH-206ENST00000553830 KIDINS220Q9ULH0 1771 aa21.15■□□□□ 0.98
PRKCH-206ENST00000553830 KDM6BO15054 1643 aa21.15■□□□□ 0.98
PRKCH-206ENST00000553830 ADGRL2O95490 1459 aa21.14■□□□□ 0.98
PRKCH-206ENST00000553830 COL17A1Q9UMD9 1497 aaPredicted RBP21.14■□□□□ 0.98
PRKCH-206ENST00000553830 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
PRKCH-206ENST00000553830 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
PRKCH-206ENST00000553830 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
PRKCH-206ENST00000553830 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
PRKCH-206ENST00000553830 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
PRKCH-206ENST00000553830 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
PRKCH-206ENST00000553830 NAIPQ13075 1403 aa21.11■□□□□ 0.97
PRKCH-206ENST00000553830 ABCA6Q8N139 1617 aa21.09■□□□□ 0.97
PRKCH-206ENST00000553830 RTEL1-TNFRSF6BF6WH68 1400 aa21.09■□□□□ 0.97
PRKCH-206ENST00000553830 ZMYM4Q5VZL5 1548 aa21.08■□□□□ 0.96
PRKCH-206ENST00000553830 RAB3GAP2Q9H2M9 1393 aa21.08■□□□□ 0.96
PRKCH-206ENST00000553830 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
PRKCH-206ENST00000553830 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
PRKCH-206ENST00000553830 DIP2CQ9Y2E4 1556 aa21.05■□□□□ 0.96
PRKCH-206ENST00000553830 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
PRKCH-206ENST00000553830 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
PRKCH-206ENST00000553830 ARHGEF40Q8TER5 1519 aa20.99■□□□□ 0.95
PRKCH-206ENST00000553830 A2MP01023 1474 aa20.99■□□□□ 0.95
PRKCH-206ENST00000553830 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
PRKCH-206ENST00000553830 MAGI2Q86UL8 1455 aa20.98■□□□□ 0.95
PRKCH-206ENST00000553830 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
PRKCH-206ENST00000553830 DHX29Q7Z478 1369 aaKnown RBP20.95■□□□□ 0.94
PRKCH-206ENST00000553830 ATP10AO60312 1499 aa20.94■□□□□ 0.94
PRKCH-206ENST00000553830 EIF2AK4Q9P2K8 1649 aaKnown RBP20.93■□□□□ 0.94
PRKCH-206ENST00000553830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.93■□□□□ 0.94
PRKCH-206ENST00000553830 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
PRKCH-206ENST00000553830 KIF3BO15066 747 aa20.91■□□□□ 0.94
PRKCH-206ENST00000553830 UNC13BO14795 1591 aa20.9■□□□□ 0.94
PRKCH-206ENST00000553830 HRCP23327 699 aa20.87■□□□□ 0.93
PRKCH-206ENST00000553830 REREQ9P2R6 1566 aa20.86■□□□□ 0.93
PRKCH-206ENST00000553830 DEPDC5O75140 1603 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms