RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 PREX2Q70Z35 1606 aa32.51■■■□□ 2.79
XRCC3-205ENST00000553807 CDC42BPBQ9Y5S2 1711 aa32.48■■■□□ 2.79
XRCC3-205ENST00000553807 SCAPERQ9BY12 1400 aa32.47■■■□□ 2.79
XRCC3-205ENST00000553807 EHBP1L1Q8N3D4 1523 aa32.46■■■□□ 2.79
XRCC3-205ENST00000553807 CDC42BPAQ5VT25 1732 aa32.46■■■□□ 2.79
XRCC3-205ENST00000553807 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
XRCC3-205ENST00000553807 KDM4FA0A1W2PPD8 638 aa32.43■■■□□ 2.78
XRCC3-205ENST00000553807 ZMYM4Q5VZL5 1548 aa32.41■■■□□ 2.78
XRCC3-205ENST00000553807 TIAM1Q13009 1591 aa32.41■■■□□ 2.78
XRCC3-205ENST00000553807 ARHGEF40Q8TER5 1519 aa32.4■■■□□ 2.78
XRCC3-205ENST00000553807 GPATCH8Q9UKJ3 1502 aaKnown RBP32.36■■■□□ 2.77
XRCC3-205ENST00000553807 CCNB3Q8WWL7 1395 aa32.35■■■□□ 2.77
XRCC3-205ENST00000553807 ABCC1P33527 1531 aa32.35■■■□□ 2.77
XRCC3-205ENST00000553807 ZFYVE16Q7Z3T8 1539 aa32.34■■■□□ 2.77
XRCC3-205ENST00000553807 ZNF518AQ6AHZ1 1483 aa32.31■■■□□ 2.76
XRCC3-205ENST00000553807 ZNF777Q9ULD5 760 aaPredicted RBP32.3■■■□□ 2.76
XRCC3-205ENST00000553807 YEATS2Q9ULM3 1422 aa32.29■■■□□ 2.76
XRCC3-205ENST00000553807 ITSN2Q9NZM3 1697 aa32.29■■■□□ 2.76
XRCC3-205ENST00000553807 MAGI2Q86UL8 1455 aa32.29■■■□□ 2.76
XRCC3-205ENST00000553807 SUPT6HQ7KZ85 1726 aaKnown RBP32.29■■■□□ 2.76
XRCC3-205ENST00000553807 SAMD9LQ8IVG5 1584 aa32.28■■■□□ 2.76
XRCC3-205ENST00000553807 ARHGEF12Q9NZN5 1544 aa32.26■■■□□ 2.76
XRCC3-205ENST00000553807 KDM5CP41229 1560 aa32.26■■■□□ 2.75
XRCC3-205ENST00000553807 NCOA2Q15596 1464 aa32.25■■■□□ 2.75
XRCC3-205ENST00000553807 CFDP1Q9UEE9 299 aaPredicted RBP32.25■■■□□ 2.75
XRCC3-205ENST00000553807 LRRC9Q6ZRR7 1453 aa32.24■■■□□ 2.75
XRCC3-205ENST00000553807 AFAP1Q8N556 730 aa32.24■■■□□ 2.75
XRCC3-205ENST00000553807 MAP3K1Q13233 1512 aa32.23■■■□□ 2.75
XRCC3-205ENST00000553807 SYCP2Q9BX26 1530 aa32.23■■■□□ 2.75
XRCC3-205ENST00000553807 TRAPPC8Q9Y2L5 1435 aa32.23■■■□□ 2.75
XRCC3-205ENST00000553807 ARID4BQ4LE39 1312 aaPredicted RBP32.22■■■□□ 2.75
XRCC3-205ENST00000553807 HECW2Q9P2P5 1572 aa32.21■■■□□ 2.75
XRCC3-205ENST00000553807 MYT1LQ9UL68 1186 aa32.18■■■□□ 2.74
XRCC3-205ENST00000553807 PLEKHH2Q8IVE3 1493 aa32.16■■■□□ 2.74
XRCC3-205ENST00000553807 KANK4Q5T7N3 995 aaPredicted RBP32.15■■■□□ 2.74
XRCC3-205ENST00000553807 APLP2Q06481 763 aa32.14■■■□□ 2.74
XRCC3-205ENST00000553807 BCORL1Q5H9F3 1711 aa32.14■■■□□ 2.74
XRCC3-205ENST00000553807 SIGLEC1Q9BZZ2 1709 aa32.14■■■□□ 2.74
XRCC3-205ENST00000553807 ATP10AO60312 1499 aa32.12■■■□□ 2.73
XRCC3-205ENST00000553807 C9orf84Q5VXU9 1444 aa32.12■■■□□ 2.73
XRCC3-205ENST00000553807 MLH3Q9UHC1 1453 aa32.11■■■□□ 2.73
XRCC3-205ENST00000553807 KIAA1107Q9UPP5 1409 aa32.11■■■□□ 2.73
XRCC3-205ENST00000553807 HNRNPMP52272 730 aaKnown RBP eCLIP32.11■■■□□ 2.73
XRCC3-205ENST00000553807 DIP2CQ9Y2E4 1556 aa32.11■■■□□ 2.73
XRCC3-205ENST00000553807 ADAMTSL3P82987 1691 aa32.1■■■□□ 2.73
XRCC3-205ENST00000553807 ABCA6Q8N139 1617 aa32.1■■■□□ 2.73
XRCC3-205ENST00000553807 ZNF644Q9H582 1327 aaPredicted RBP32.09■■■□□ 2.73
XRCC3-205ENST00000553807 MADDQ8WXG6 1647 aa32.05■■■□□ 2.72
XRCC3-205ENST00000553807 KIDINS220Q9ULH0 1771 aa32.05■■■□□ 2.72
XRCC3-205ENST00000553807 CAMSAP2Q08AD1 1489 aa32.03■■■□□ 2.72
XRCC3-205ENST00000553807 SPAG9O60271 1321 aaKnown RBP32.01■■■□□ 2.72
XRCC3-205ENST00000553807 MLECQ14165 292 aa31.99■■■□□ 2.71
XRCC3-205ENST00000553807 ATP7AQ04656 1500 aa31.99■■■□□ 2.71
XRCC3-205ENST00000553807 INO80Q9ULG1 1556 aaPredicted RBP31.98■■■□□ 2.71
XRCC3-205ENST00000553807 MBD5Q9P267 1494 aa31.98■■■□□ 2.71
XRCC3-205ENST00000553807 REREQ9P2R6 1566 aa31.98■■■□□ 2.71
XRCC3-205ENST00000553807 RIMS1Q86UR5 1692 aaKnown RBP31.96■■■□□ 2.71
XRCC3-205ENST00000553807 MYOM3Q5VTT5 1437 aa31.96■■■□□ 2.71
XRCC3-205ENST00000553807 PTPRMP28827 1452 aa31.96■■■□□ 2.71
XRCC3-205ENST00000553807 CCDC141Q6ZP82 1450 aa31.92■■■□□ 2.7
XRCC3-205ENST00000553807 FER1L4A9Z1Z3 1794 aa31.91■■■□□ 2.7
XRCC3-205ENST00000553807 MIA2Q96PC5 1412 aa31.88■■■□□ 2.69
XRCC3-205ENST00000553807 AGLP35573 1532 aa31.87■■■□□ 2.69
XRCC3-205ENST00000553807 ARHGEF5Q12774 1597 aa31.86■■■□□ 2.69
XRCC3-205ENST00000553807 A2MP01023 1474 aa31.82■■■□□ 2.68
XRCC3-205ENST00000553807 ADGBQ8N7X0 1667 aa31.81■■■□□ 2.68
XRCC3-205ENST00000553807 PLPPR3Q6T4P5 718 aa31.81■■■□□ 2.68
XRCC3-205ENST00000553807 RTEL1-TNFRSF6BF6WH68 1400 aa31.81■■■□□ 2.68
XRCC3-205ENST00000553807 PLXNC1O60486 1568 aa31.81■■■□□ 2.68
XRCC3-205ENST00000553807 RSPH4AQ5TD94 716 aa31.79■■■□□ 2.68
XRCC3-205ENST00000553807 PTPN23Q9H3S7 1636 aa31.78■■■□□ 2.68
XRCC3-205ENST00000553807 FGD6Q6ZV73 1430 aa31.76■■■□□ 2.68
XRCC3-205ENST00000553807 TSPY4P0CV99 314 aa31.73■■■□□ 2.67
XRCC3-205ENST00000553807 TSPY10P0CW01 314 aa31.73■■■□□ 2.67
XRCC3-205ENST00000553807 MAST1Q9Y2H9 1570 aa31.69■■■□□ 2.66
XRCC3-205ENST00000553807 ESF1Q9H501 851 aaKnown RBP31.68■■■□□ 2.66
XRCC3-205ENST00000553807 TCOF1Q13428 1488 aaKnown RBP31.67■■■□□ 2.66
XRCC3-205ENST00000553807 CROCC2H7BZ55 1655 aa31.65■■■□□ 2.66
XRCC3-205ENST00000553807 DHX29Q7Z478 1369 aaKnown RBP31.65■■■□□ 2.66
XRCC3-205ENST00000553807 DNMT1P26358 1616 aaKnown RBP31.62■■■□□ 2.65
XRCC3-205ENST00000553807 CEBPAP49715 358 aaPredicted RBP31.62■■■□□ 2.65
XRCC3-205ENST00000553807 ABCC5O15440 1437 aa31.61■■■□□ 2.65
XRCC3-205ENST00000553807 CNTLNQ9NXG0 1405 aa31.61■■■□□ 2.65
XRCC3-205ENST00000553807 PPARGC1BQ86YN6 1023 aaKnown RBP31.61■■■□□ 2.65
XRCC3-205ENST00000553807 SHANK2Q9UPX8 1470 aa31.6■■■□□ 2.65
XRCC3-205ENST00000553807 GGT6Q6P531 493 aa31.6■■■□□ 2.65
XRCC3-205ENST00000553807 DAPK1P53355 1430 aa31.59■■■□□ 2.65
XRCC3-205ENST00000553807 C3P01024 1663 aa31.59■■■□□ 2.65
XRCC3-205ENST00000553807 CLTCQ00610 1675 aaKnown RBP31.57■■■□□ 2.64
XRCC3-205ENST00000553807 LMTK3Q96Q04 1460 aa31.56■■■□□ 2.64
XRCC3-205ENST00000553807 KIF3BO15066 747 aa31.55■■■□□ 2.64
XRCC3-205ENST00000553807 FAM50AQ14320 339 aaKnown RBP31.55■■■□□ 2.64
XRCC3-205ENST00000553807 MROH2AA6NES4 1674 aa31.54■■■□□ 2.64
XRCC3-205ENST00000553807 PREX1Q8TCU6 1659 aa31.49■■■□□ 2.63
XRCC3-205ENST00000553807 KIF15Q9NS87 1388 aa31.48■■■□□ 2.63
XRCC3-205ENST00000553807 DUOX2Q9NRD8 1548 aa31.48■■■□□ 2.63
XRCC3-205ENST00000553807 EIF2AK4Q9P2K8 1649 aaKnown RBP31.46■■■□□ 2.63
XRCC3-205ENST00000553807 CHIC2Q9UKJ5 165 aa31.46■■■□□ 2.63
XRCC3-205ENST00000553807 ZMYM3Q14202 1370 aa31.45■■■□□ 2.63
XRCC3-205ENST00000553807 RRP7BPQ9NSQ0 103 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms