RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MTUS2Q5JR59 1369 aa32.46■■■□□ 2.79
FOXA1-203ENST00000553751 EHBP1L1Q8N3D4 1523 aa32.46■■■□□ 2.79
FOXA1-203ENST00000553751 CDC42BPAQ5VT25 1732 aa32.45■■■□□ 2.78
FOXA1-203ENST00000553751 SCAPERQ9BY12 1400 aa32.43■■■□□ 2.78
FOXA1-203ENST00000553751 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
FOXA1-203ENST00000553751 TIAM1Q13009 1591 aa32.42■■■□□ 2.78
FOXA1-203ENST00000553751 ZMYM4Q5VZL5 1548 aa32.41■■■□□ 2.78
FOXA1-203ENST00000553751 KDM4FA0A1W2PPD8 638 aa32.39■■■□□ 2.78
FOXA1-203ENST00000553751 GPATCH8Q9UKJ3 1502 aaKnown RBP32.38■■■□□ 2.77
FOXA1-203ENST00000553751 ARHGEF40Q8TER5 1519 aa32.37■■■□□ 2.77
FOXA1-203ENST00000553751 AEBP2Q6ZN18 517 aaPredicted RBP32.35■■■□□ 2.77
FOXA1-203ENST00000553751 ABCC1P33527 1531 aa32.34■■■□□ 2.77
FOXA1-203ENST00000553751 CCNB3Q8WWL7 1395 aa32.31■■■□□ 2.76
FOXA1-203ENST00000553751 ZNF518AQ6AHZ1 1483 aa32.3■■■□□ 2.76
FOXA1-203ENST00000553751 MAGI2Q86UL8 1455 aa32.3■■■□□ 2.76
FOXA1-203ENST00000553751 MAP3K1Q13233 1512 aa32.3■■■□□ 2.76
FOXA1-203ENST00000553751 ZFYVE16Q7Z3T8 1539 aa32.3■■■□□ 2.76
FOXA1-203ENST00000553751 KDM5CP41229 1560 aa32.28■■■□□ 2.76
FOXA1-203ENST00000553751 SAMD9LQ8IVG5 1584 aa32.28■■■□□ 2.76
FOXA1-203ENST00000553751 ITSN2Q9NZM3 1697 aa32.28■■■□□ 2.76
FOXA1-203ENST00000553751 ARHGEF12Q9NZN5 1544 aa32.28■■■□□ 2.76
FOXA1-203ENST00000553751 YEATS2Q9ULM3 1422 aa32.26■■■□□ 2.76
FOXA1-203ENST00000553751 SUPT6HQ7KZ85 1726 aaKnown RBP32.26■■■□□ 2.76
FOXA1-203ENST00000553751 LRRC9Q6ZRR7 1453 aa32.26■■■□□ 2.75
FOXA1-203ENST00000553751 NCOA2Q15596 1464 aa32.24■■■□□ 2.75
FOXA1-203ENST00000553751 TRAPPC8Q9Y2L5 1435 aa32.21■■■□□ 2.75
FOXA1-203ENST00000553751 CFDP1Q9UEE9 299 aaPredicted RBP32.21■■■□□ 2.75
FOXA1-203ENST00000553751 AFAP1Q8N556 730 aa32.2■■■□□ 2.75
FOXA1-203ENST00000553751 SYCP2Q9BX26 1530 aa32.2■■■□□ 2.74
FOXA1-203ENST00000553751 ZNF777Q9ULD5 760 aaPredicted RBP32.19■■■□□ 2.74
FOXA1-203ENST00000553751 HECW2Q9P2P5 1572 aa32.18■■■□□ 2.74
FOXA1-203ENST00000553751 KANK4Q5T7N3 995 aaPredicted RBP32.16■■■□□ 2.74
FOXA1-203ENST00000553751 SIGLEC1Q9BZZ2 1709 aa32.15■■■□□ 2.74
FOXA1-203ENST00000553751 PLEKHH2Q8IVE3 1493 aa32.15■■■□□ 2.74
FOXA1-203ENST00000553751 KIAA1107Q9UPP5 1409 aa32.14■■■□□ 2.74
FOXA1-203ENST00000553751 MLH3Q9UHC1 1453 aa32.14■■■□□ 2.74
FOXA1-203ENST00000553751 BCORL1Q5H9F3 1711 aa32.12■■■□□ 2.73
FOXA1-203ENST00000553751 ATP10AO60312 1499 aa32.1■■■□□ 2.73
FOXA1-203ENST00000553751 ADAMTSL3P82987 1691 aa32.1■■■□□ 2.73
FOXA1-203ENST00000553751 DIP2CQ9Y2E4 1556 aa32.1■■■□□ 2.73
FOXA1-203ENST00000553751 C9orf84Q5VXU9 1444 aa32.09■■■□□ 2.73
FOXA1-203ENST00000553751 ABCA6Q8N139 1617 aa32.08■■■□□ 2.73
FOXA1-203ENST00000553751 ARID4BQ4LE39 1312 aaPredicted RBP32.08■■■□□ 2.73
FOXA1-203ENST00000553751 HNRNPMP52272 730 aaKnown RBP eCLIP32.07■■■□□ 2.72
FOXA1-203ENST00000553751 ZNF644Q9H582 1327 aaPredicted RBP32.06■■■□□ 2.72
FOXA1-203ENST00000553751 KIDINS220Q9ULH0 1771 aa32.05■■■□□ 2.72
FOXA1-203ENST00000553751 APLP2Q06481 763 aa32.04■■■□□ 2.72
FOXA1-203ENST00000553751 CAMSAP2Q08AD1 1489 aa32.03■■■□□ 2.72
FOXA1-203ENST00000553751 MBD5Q9P267 1494 aa32.03■■■□□ 2.72
FOXA1-203ENST00000553751 REREQ9P2R6 1566 aa32.02■■■□□ 2.72
FOXA1-203ENST00000553751 MYT1LQ9UL68 1186 aa32.01■■■□□ 2.71
FOXA1-203ENST00000553751 MADDQ8WXG6 1647 aa32■■■□□ 2.71
FOXA1-203ENST00000553751 INO80Q9ULG1 1556 aaPredicted RBP32■■■□□ 2.71
FOXA1-203ENST00000553751 ATP7AQ04656 1500 aa31.97■■■□□ 2.71
FOXA1-203ENST00000553751 SPAG9O60271 1321 aaKnown RBP31.97■■■□□ 2.71
FOXA1-203ENST00000553751 MYOM3Q5VTT5 1437 aa31.96■■■□□ 2.71
FOXA1-203ENST00000553751 PTPRMP28827 1452 aa31.92■■■□□ 2.7
FOXA1-203ENST00000553751 MIA2Q96PC5 1412 aa31.91■■■□□ 2.7
FOXA1-203ENST00000553751 CCDC141Q6ZP82 1450 aa31.91■■■□□ 2.7
FOXA1-203ENST00000553751 AGLP35573 1532 aa31.9■■■□□ 2.7
FOXA1-203ENST00000553751 ARHGEF5Q12774 1597 aa31.89■■■□□ 2.7
FOXA1-203ENST00000553751 RIMS1Q86UR5 1692 aaKnown RBP31.89■■■□□ 2.7
FOXA1-203ENST00000553751 MLECQ14165 292 aa31.86■■■□□ 2.69
FOXA1-203ENST00000553751 FER1L4A9Z1Z3 1794 aa31.85■■■□□ 2.69
FOXA1-203ENST00000553751 RTEL1-TNFRSF6BF6WH68 1400 aa31.84■■■□□ 2.69
FOXA1-203ENST00000553751 PLXNC1O60486 1568 aa31.83■■■□□ 2.69
FOXA1-203ENST00000553751 RSPH4AQ5TD94 716 aa31.81■■■□□ 2.68
FOXA1-203ENST00000553751 ADGBQ8N7X0 1667 aa31.8■■■□□ 2.68
FOXA1-203ENST00000553751 A2MP01023 1474 aa31.79■■■□□ 2.68
FOXA1-203ENST00000553751 PTPN23Q9H3S7 1636 aa31.77■■■□□ 2.68
FOXA1-203ENST00000553751 FGD6Q6ZV73 1430 aa31.76■■■□□ 2.68
FOXA1-203ENST00000553751 MAST1Q9Y2H9 1570 aa31.73■■■□□ 2.67
FOXA1-203ENST00000553751 TCOF1Q13428 1488 aaKnown RBP31.72■■■□□ 2.67
FOXA1-203ENST00000553751 TSPY4P0CV99 314 aa31.68■■■□□ 2.66
FOXA1-203ENST00000553751 TSPY10P0CW01 314 aa31.68■■■□□ 2.66
FOXA1-203ENST00000553751 DHX29Q7Z478 1369 aaKnown RBP31.66■■■□□ 2.66
FOXA1-203ENST00000553751 CROCC2H7BZ55 1655 aa31.65■■■□□ 2.66
FOXA1-203ENST00000553751 DNMT1P26358 1616 aaKnown RBP31.63■■■□□ 2.65
FOXA1-203ENST00000553751 ABCC5O15440 1437 aa31.62■■■□□ 2.65
FOXA1-203ENST00000553751 SHANK2Q9UPX8 1470 aa31.62■■■□□ 2.65
FOXA1-203ENST00000553751 DAPK1P53355 1430 aa31.59■■■□□ 2.65
FOXA1-203ENST00000553751 CNTLNQ9NXG0 1405 aa31.59■■■□□ 2.65
FOXA1-203ENST00000553751 PLPPR3Q6T4P5 718 aa31.59■■■□□ 2.65
FOXA1-203ENST00000553751 C3P01024 1663 aa31.56■■■□□ 2.64
FOXA1-203ENST00000553751 LMTK3Q96Q04 1460 aa31.55■■■□□ 2.64
FOXA1-203ENST00000553751 CEBPAP49715 358 aaPredicted RBP31.55■■■□□ 2.64
FOXA1-203ENST00000553751 MROH2AA6NES4 1674 aa31.54■■■□□ 2.64
FOXA1-203ENST00000553751 ESF1Q9H501 851 aaKnown RBP31.54■■■□□ 2.64
FOXA1-203ENST00000553751 GGT6Q6P531 493 aa31.52■■■□□ 2.64
FOXA1-203ENST00000553751 CLTCQ00610 1675 aaKnown RBP31.51■■■□□ 2.64
FOXA1-203ENST00000553751 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
FOXA1-203ENST00000553751 KIF3BO15066 747 aa31.49■■■□□ 2.63
FOXA1-203ENST00000553751 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
FOXA1-203ENST00000553751 DUOX2Q9NRD8 1548 aa31.48■■■□□ 2.63
FOXA1-203ENST00000553751 FAM50AQ14320 339 aaKnown RBP31.46■■■□□ 2.63
FOXA1-203ENST00000553751 PPP6R1Q9UPN7 881 aa31.46■■■□□ 2.63
FOXA1-203ENST00000553751 KIF15Q9NS87 1388 aa31.45■■■□□ 2.63
FOXA1-203ENST00000553751 PREX1Q8TCU6 1659 aa31.45■■■□□ 2.63
FOXA1-203ENST00000553751 RNF17Q9BXT8 1623 aaKnown RBP31.45■■■□□ 2.62
FOXA1-203ENST00000553751 FAM135AQ9P2D6 1515 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms