RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 RAPGEF3O95398 923 aa22.27■■□□□ 1.16
SV2B-204ENST00000553727 CFDP1Q9UEE9 299 aaPredicted RBP22.27■■□□□ 1.16
SV2B-204ENST00000553727 ARAP3Q8WWN8 1544 aa22.26■■□□□ 1.15
SV2B-204ENST00000553727 GPATCH8Q9UKJ3 1502 aaKnown RBP22.26■■□□□ 1.15
SV2B-204ENST00000553727 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
SV2B-204ENST00000553727 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
SV2B-204ENST00000553727 SUPT6HQ7KZ85 1726 aaKnown RBP22.23■■□□□ 1.15
SV2B-204ENST00000553727 ADGRL1O94910 1474 aa22.23■■□□□ 1.15
SV2B-204ENST00000553727 PREX2Q70Z35 1606 aa22.23■■□□□ 1.15
SV2B-204ENST00000553727 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
SV2B-204ENST00000553727 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
SV2B-204ENST00000553727 CDC42BPAQ5VT25 1732 aa22.21■■□□□ 1.15
SV2B-204ENST00000553727 CDC42BPBQ9Y5S2 1711 aa22.21■■□□□ 1.15
SV2B-204ENST00000553727 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
SV2B-204ENST00000553727 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
SV2B-204ENST00000553727 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
SV2B-204ENST00000553727 HNRNPMP52272 730 aaKnown RBP eCLIP22.14■■□□□ 1.13
SV2B-204ENST00000553727 AFAP1Q8N556 730 aa22.14■■□□□ 1.13
SV2B-204ENST00000553727 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
SV2B-204ENST00000553727 MYT1LQ9UL68 1186 aa22.12■■□□□ 1.13
SV2B-204ENST00000553727 POGZQ7Z3K3 1410 aa22.12■■□□□ 1.13
SV2B-204ENST00000553727 FRMPD1Q5SYB0 1578 aa22.11■■□□□ 1.13
SV2B-204ENST00000553727 SAMD9LQ8IVG5 1584 aa22.11■■□□□ 1.13
SV2B-204ENST00000553727 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
SV2B-204ENST00000553727 MYOM3Q5VTT5 1437 aa22.1■■□□□ 1.13
SV2B-204ENST00000553727 ABCC1P33527 1531 aa22.1■■□□□ 1.13
SV2B-204ENST00000553727 TRAPPC8Q9Y2L5 1435 aa22.09■■□□□ 1.13
SV2B-204ENST00000553727 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
SV2B-204ENST00000553727 RICTORQ6R327 1708 aa22.08■■□□□ 1.12
SV2B-204ENST00000553727 ZNF518AQ6AHZ1 1483 aa22.08■■□□□ 1.12
SV2B-204ENST00000553727 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
SV2B-204ENST00000553727 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
SV2B-204ENST00000553727 MIA2Q96PC5 1412 aa22.04■■□□□ 1.12
SV2B-204ENST00000553727 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
SV2B-204ENST00000553727 ZMYM4Q5VZL5 1548 aa22.01■■□□□ 1.11
SV2B-204ENST00000553727 YEATS2Q9ULM3 1422 aa22.01■■□□□ 1.11
SV2B-204ENST00000553727 MAGI2Q86UL8 1455 aa22.01■■□□□ 1.11
SV2B-204ENST00000553727 SPAG9O60271 1321 aaKnown RBP22.01■■□□□ 1.11
SV2B-204ENST00000553727 MBD5Q9P267 1494 aa21.99■■□□□ 1.11
SV2B-204ENST00000553727 ZFYVE16Q7Z3T8 1539 aa21.99■■□□□ 1.11
SV2B-204ENST00000553727 KDM5CP41229 1560 aa21.99■■□□□ 1.11
SV2B-204ENST00000553727 FGD6Q6ZV73 1430 aa21.98■■□□□ 1.11
SV2B-204ENST00000553727 RSPH4AQ5TD94 716 aa21.98■■□□□ 1.11
SV2B-204ENST00000553727 ARID4BQ4LE39 1312 aaPredicted RBP21.97■■□□□ 1.11
SV2B-204ENST00000553727 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
SV2B-204ENST00000553727 MLH3Q9UHC1 1453 aa21.96■■□□□ 1.11
SV2B-204ENST00000553727 ARHGEF40Q8TER5 1519 aa21.95■■□□□ 1.1
SV2B-204ENST00000553727 HECW2Q9P2P5 1572 aa21.95■■□□□ 1.1
SV2B-204ENST00000553727 TSPY4P0CV99 314 aa21.94■■□□□ 1.1
SV2B-204ENST00000553727 TSPY10P0CW01 314 aa21.94■■□□□ 1.1
SV2B-204ENST00000553727 CCDC141Q6ZP82 1450 aa21.93■■□□□ 1.1
SV2B-204ENST00000553727 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
SV2B-204ENST00000553727 ATP10AO60312 1499 aa21.92■■□□□ 1.1
SV2B-204ENST00000553727 ARHGEF5Q12774 1597 aa21.89■■□□□ 1.09
SV2B-204ENST00000553727 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
SV2B-204ENST00000553727 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
SV2B-204ENST00000553727 C9orf84Q5VXU9 1444 aa21.88■■□□□ 1.09
SV2B-204ENST00000553727 KIDINS220Q9ULH0 1771 aa21.87■■□□□ 1.09
SV2B-204ENST00000553727 KDM4FA0A1W2PPD8 638 aa21.86■■□□□ 1.09
SV2B-204ENST00000553727 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
SV2B-204ENST00000553727 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
SV2B-204ENST00000553727 ABCA6Q8N139 1617 aa21.85■■□□□ 1.09
SV2B-204ENST00000553727 MLECQ14165 292 aa21.85■■□□□ 1.09
SV2B-204ENST00000553727 INO80Q9ULG1 1556 aaPredicted RBP21.84■■□□□ 1.09
SV2B-204ENST00000553727 ABCC5O15440 1437 aa21.84■■□□□ 1.09
SV2B-204ENST00000553727 DAPK1P53355 1430 aa21.82■■□□□ 1.08
SV2B-204ENST00000553727 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
SV2B-204ENST00000553727 ITGAEP38570 1179 aa21.79■■□□□ 1.08
SV2B-204ENST00000553727 A2MP01023 1474 aa21.78■■□□□ 1.08
SV2B-204ENST00000553727 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
SV2B-204ENST00000553727 DNMT1P26358 1616 aaKnown RBP21.77■■□□□ 1.08
SV2B-204ENST00000553727 RRP7BPQ9NSQ0 103 aa21.76■■□□□ 1.07
SV2B-204ENST00000553727 REREQ9P2R6 1566 aa21.76■■□□□ 1.07
SV2B-204ENST00000553727 DHX29Q7Z478 1369 aaKnown RBP21.75■■□□□ 1.07
SV2B-204ENST00000553727 MAST1Q9Y2H9 1570 aa21.75■■□□□ 1.07
SV2B-204ENST00000553727 SHANK2Q9UPX8 1470 aa21.75■■□□□ 1.07
SV2B-204ENST00000553727 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
SV2B-204ENST00000553727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
SV2B-204ENST00000553727 BCORL1Q5H9F3 1711 aa21.72■■□□□ 1.07
SV2B-204ENST00000553727 AGLP35573 1532 aa21.72■■□□□ 1.07
SV2B-204ENST00000553727 ADGBQ8N7X0 1667 aa21.72■■□□□ 1.07
SV2B-204ENST00000553727 ANKRD30AQ9BXX3 1397 aa21.72■■□□□ 1.07
SV2B-204ENST00000553727 KIF3BO15066 747 aa21.71■■□□□ 1.07
SV2B-204ENST00000553727 GGT6Q6P531 493 aa21.71■■□□□ 1.07
SV2B-204ENST00000553727 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
SV2B-204ENST00000553727 KIF15Q9NS87 1388 aa21.7■■□□□ 1.06
SV2B-204ENST00000553727 ESF1Q9H501 851 aaKnown RBP21.69■■□□□ 1.06
SV2B-204ENST00000553727 PTPRKQ15262 1439 aa21.69■■□□□ 1.06
SV2B-204ENST00000553727 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
SV2B-204ENST00000553727 ADAMTSL3P82987 1691 aa21.67■■□□□ 1.06
SV2B-204ENST00000553727 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
SV2B-204ENST00000553727 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
SV2B-204ENST00000553727 MADDQ8WXG6 1647 aa21.65■■□□□ 1.06
SV2B-204ENST00000553727 DUOX2Q9NRD8 1548 aa21.65■■□□□ 1.06
SV2B-204ENST00000553727 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
SV2B-204ENST00000553727 PTPRMP28827 1452 aa21.61■■□□□ 1.05
SV2B-204ENST00000553727 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
SV2B-204ENST00000553727 RIMS1Q86UR5 1692 aaKnown RBP21.6■■□□□ 1.05
SV2B-204ENST00000553727 ERBINQ96RT1 1412 aa21.58■■□□□ 1.05
SV2B-204ENST00000553727 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms