RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PPARGC1BQ86YN6 1023 aaKnown RBP28.03■■■□□ 2.08
PSEN1-208ENST00000553719 TEX14Q8IWB6 1497 aa27.99■■■□□ 2.07
PSEN1-208ENST00000553719 ARHGAP5Q13017 1502 aa27.98■■■□□ 2.07
PSEN1-208ENST00000553719 FANCAO15360 1455 aa27.98■■■□□ 2.07
PSEN1-208ENST00000553719 CFAP74Q9C0B2 1584 aa27.98■■■□□ 2.07
PSEN1-208ENST00000553719 NEO1Q92859 1461 aa27.97■■■□□ 2.07
PSEN1-208ENST00000553719 MIA2Q96PC5 1412 aa27.95■■■□□ 2.07
PSEN1-208ENST00000553719 SAMD9LQ8IVG5 1584 aa27.94■■■□□ 2.06
PSEN1-208ENST00000553719 FGD6Q6ZV73 1430 aa27.92■■■□□ 2.06
PSEN1-208ENST00000553719 EFCAB2Q5VUJ9 269 aa27.9■■■□□ 2.06
PSEN1-208ENST00000553719 CFDP1Q9UEE9 299 aaPredicted RBP27.9■■■□□ 2.06
PSEN1-208ENST00000553719 ABCC1P33527 1531 aa27.9■■■□□ 2.06
PSEN1-208ENST00000553719 AKNAQ7Z591 1439 aa27.89■■■□□ 2.06
PSEN1-208ENST00000553719 TCOF1Q13428 1488 aaKnown RBP27.89■■■□□ 2.05
PSEN1-208ENST00000553719 PTPN23Q9H3S7 1636 aa27.87■■■□□ 2.05
PSEN1-208ENST00000553719 CAMSAP2Q08AD1 1489 aa27.87■■■□□ 2.05
PSEN1-208ENST00000553719 RRBP1Q9P2E9 1410 aaKnown RBP27.85■■■□□ 2.05
PSEN1-208ENST00000553719 ADGRL1O94910 1474 aa27.84■■■□□ 2.05
PSEN1-208ENST00000553719 ARHGEF12Q9NZN5 1544 aa27.84■■■□□ 2.05
PSEN1-208ENST00000553719 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
PSEN1-208ENST00000553719 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.04
PSEN1-208ENST00000553719 ZNF644Q9H582 1327 aaPredicted RBP27.82■■■□□ 2.04
PSEN1-208ENST00000553719 SYCP2Q9BX26 1530 aa27.82■■■□□ 2.04
PSEN1-208ENST00000553719 MBD5Q9P267 1494 aa27.8■■■□□ 2.04
PSEN1-208ENST00000553719 COL17A1Q9UMD9 1497 aaPredicted RBP27.8■■■□□ 2.04
PSEN1-208ENST00000553719 FRMPD1Q5SYB0 1578 aa27.77■■■□□ 2.04
PSEN1-208ENST00000553719 SCAPERQ9BY12 1400 aa27.77■■■□□ 2.04
PSEN1-208ENST00000553719 ZNF777Q9ULD5 760 aaPredicted RBP27.77■■■□□ 2.04
PSEN1-208ENST00000553719 RICTORQ6R327 1708 aa27.77■■■□□ 2.04
PSEN1-208ENST00000553719 ARHGEF5Q12774 1597 aa27.77■■■□□ 2.04
PSEN1-208ENST00000553719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.03
PSEN1-208ENST00000553719 POGZQ7Z3K3 1410 aa27.75■■■□□ 2.03
PSEN1-208ENST00000553719 DENND4BO75064 1496 aaPredicted RBP27.74■■■□□ 2.03
PSEN1-208ENST00000553719 KDM6BO15054 1643 aa27.73■■■□□ 2.03
PSEN1-208ENST00000553719 TRAPPC8Q9Y2L5 1435 aa27.73■■■□□ 2.03
PSEN1-208ENST00000553719 KDM5CP41229 1560 aa27.73■■■□□ 2.03
PSEN1-208ENST00000553719 DNMT1P26358 1616 aaKnown RBP27.71■■■□□ 2.03
PSEN1-208ENST00000553719 ZNF518AQ6AHZ1 1483 aa27.7■■■□□ 2.02
PSEN1-208ENST00000553719 ZMYM4Q5VZL5 1548 aa27.69■■■□□ 2.02
PSEN1-208ENST00000553719 CCDC141Q6ZP82 1450 aa27.69■■■□□ 2.02
PSEN1-208ENST00000553719 CROCC2H7BZ55 1655 aa27.68■■■□□ 2.02
PSEN1-208ENST00000553719 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.02
PSEN1-208ENST00000553719 ABCC5O15440 1437 aa27.65■■■□□ 2.02
PSEN1-208ENST00000553719 DAPK1P53355 1430 aa27.64■■■□□ 2.02
PSEN1-208ENST00000553719 RAPGEF3O95398 923 aa27.63■■■□□ 2.01
PSEN1-208ENST00000553719 SHANK2Q9UPX8 1470 aa27.63■■■□□ 2.01
PSEN1-208ENST00000553719 INO80Q9ULG1 1556 aaPredicted RBP27.62■■■□□ 2.01
PSEN1-208ENST00000553719 MAST1Q9Y2H9 1570 aa27.62■■■□□ 2.01
PSEN1-208ENST00000553719 FAM50AQ14320 339 aaKnown RBP27.62■■■□□ 2.01
PSEN1-208ENST00000553719 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
PSEN1-208ENST00000553719 AFAP1Q8N556 730 aa27.61■■■□□ 2.01
PSEN1-208ENST00000553719 ZFYVE16Q7Z3T8 1539 aa27.6■■■□□ 2.01
PSEN1-208ENST00000553719 HECW2Q9P2P5 1572 aa27.6■■■□□ 2.01
PSEN1-208ENST00000553719 MLH3Q9UHC1 1453 aa27.59■■■□□ 2.01
PSEN1-208ENST00000553719 KIDINS220Q9ULH0 1771 aa27.58■■■□□ 2
PSEN1-208ENST00000553719 PTPRKQ15262 1439 aa27.58■■■□□ 2
PSEN1-208ENST00000553719 MAGI2Q86UL8 1455 aa27.56■■■□□ 2
PSEN1-208ENST00000553719 RTEL1-TNFRSF6BF6WH68 1400 aa27.55■■■□□ 2
PSEN1-208ENST00000553719 ATP7AQ04656 1500 aa27.55■■■□□ 2
PSEN1-208ENST00000553719 C9orf84Q5VXU9 1444 aa27.54■■■□□ 2
PSEN1-208ENST00000553719 ARHGEF40Q8TER5 1519 aa27.51■■■□□ 2
PSEN1-208ENST00000553719 ADGRL2O95490 1459 aa27.51■■■□□ 2
PSEN1-208ENST00000553719 ABCA6Q8N139 1617 aa27.51■■□□□ 1.99
PSEN1-208ENST00000553719 PLXNC1O60486 1568 aa27.51■■□□□ 1.99
PSEN1-208ENST00000553719 ADGBQ8N7X0 1667 aa27.5■■□□□ 1.99
PSEN1-208ENST00000553719 SPAG9O60271 1321 aaKnown RBP27.5■■□□□ 1.99
PSEN1-208ENST00000553719 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
PSEN1-208ENST00000553719 DIP2CQ9Y2E4 1556 aa27.49■■□□□ 1.99
PSEN1-208ENST00000553719 TSPY4P0CV99 314 aa27.46■■□□□ 1.99
PSEN1-208ENST00000553719 TSPY10P0CW01 314 aa27.46■■□□□ 1.99
PSEN1-208ENST00000553719 ROCK1Q13464 1354 aa27.44■■□□□ 1.98
PSEN1-208ENST00000553719 NCOA1Q15788 1441 aa27.43■■□□□ 1.98
PSEN1-208ENST00000553719 REREQ9P2R6 1566 aa27.43■■□□□ 1.98
PSEN1-208ENST00000553719 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
PSEN1-208ENST00000553719 ITGAEP38570 1179 aa27.38■■□□□ 1.97
PSEN1-208ENST00000553719 CHIC2Q9UKJ5 165 aa27.38■■□□□ 1.97
PSEN1-208ENST00000553719 ATP10AO60312 1499 aa27.38■■□□□ 1.97
PSEN1-208ENST00000553719 TRIM26Q12899 539 aaPredicted RBP27.37■■□□□ 1.97
PSEN1-208ENST00000553719 SIGLEC1Q9BZZ2 1709 aa27.36■■□□□ 1.97
PSEN1-208ENST00000553719 KIF15Q9NS87 1388 aa27.35■■□□□ 1.97
PSEN1-208ENST00000553719 DUOX2Q9NRD8 1548 aa27.34■■□□□ 1.97
PSEN1-208ENST00000553719 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
PSEN1-208ENST00000553719 A2MP01023 1474 aa27.33■■□□□ 1.97
PSEN1-208ENST00000553719 HFM1A2PYH4 1435 aa27.33■■□□□ 1.96
PSEN1-208ENST00000553719 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
PSEN1-208ENST00000553719 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
PSEN1-208ENST00000553719 NAIPQ13075 1403 aa27.3■■□□□ 1.96
PSEN1-208ENST00000553719 AGLP35573 1532 aa27.3■■□□□ 1.96
PSEN1-208ENST00000553719 MYT1LQ9UL68 1186 aa27.29■■□□□ 1.96
PSEN1-208ENST00000553719 EIF2AK4Q9P2K8 1649 aaKnown RBP27.28■■□□□ 1.96
PSEN1-208ENST00000553719 ERBINQ96RT1 1412 aa27.28■■□□□ 1.96
PSEN1-208ENST00000553719 RRP7BPQ9NSQ0 103 aa27.27■■□□□ 1.96
PSEN1-208ENST00000553719 ANKRD50Q9ULJ7 1429 aa27.24■■□□□ 1.95
PSEN1-208ENST00000553719 RNF17Q9BXT8 1623 aaKnown RBP27.2■■□□□ 1.95
PSEN1-208ENST00000553719 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
PSEN1-208ENST00000553719 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
PSEN1-208ENST00000553719 SETD5Q9C0A6 1442 aa27.15■■□□□ 1.94
PSEN1-208ENST00000553719 UNC13BO14795 1591 aa27.14■■□□□ 1.94
PSEN1-208ENST00000553719 PRDM15P57071 1507 aaPredicted RBP27.13■■□□□ 1.93
PSEN1-208ENST00000553719 VWDEQ8N2E2 1590 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms