RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 NLRP6P59044 892 aa12.43□□□□□ -0.42
FCF1-204ENST00000553673 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
FCF1-204ENST00000553673 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
FCF1-204ENST00000553673 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
FCF1-204ENST00000553673 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
FCF1-204ENST00000553673 ZSWIM6Q9HCJ5 1215 aa12.41□□□□□ -0.42
FCF1-204ENST00000553673 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
FCF1-204ENST00000553673 STK25O00506 426 aa12.37□□□□□ -0.43
FCF1-204ENST00000553673 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
FCF1-204ENST00000553673 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
FCF1-204ENST00000553673 ARSIQ5FYB1 569 aa12.32□□□□□ -0.44
FCF1-204ENST00000553673 ZNF687Q8N1G0 1237 aa12.3□□□□□ -0.44
FCF1-204ENST00000553673 RGL2O15211 777 aa12.28□□□□□ -0.44
FCF1-204ENST00000553673 PKD2Q13563 968 aa12.28□□□□□ -0.44
FCF1-204ENST00000553673 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
FCF1-204ENST00000553673 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
FCF1-204ENST00000553673 KIF3CO14782 793 aa12.24□□□□□ -0.45
FCF1-204ENST00000553673 RNF166Q96A37 237 aaPredicted RBP12.24□□□□□ -0.45
FCF1-204ENST00000553673 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
FCF1-204ENST00000553673 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
FCF1-204ENST00000553673 NUDT7P0C024 238 aa12.17□□□□□ -0.46
FCF1-204ENST00000553673 TMC2Q8TDI7 906 aa12.16□□□□□ -0.46
FCF1-204ENST00000553673 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
FCF1-204ENST00000553673 PPP1R37O75864 691 aa12.13□□□□□ -0.47
FCF1-204ENST00000553673 SLC34A2O95436 690 aa12.12□□□□□ -0.47
FCF1-204ENST00000553673 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
FCF1-204ENST00000553673 PTGER2P43116 358 aa12.11□□□□□ -0.47
FCF1-204ENST00000553673 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
FCF1-204ENST00000553673 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
FCF1-204ENST00000553673 PBX2P40425 430 aa12.05□□□□□ -0.48
FCF1-204ENST00000553673 POTEEQ6S8J3 1075 aa12.04□□□□□ -0.48
FCF1-204ENST00000553673 AXIN2Q9Y2T1 843 aa12.04□□□□□ -0.48
FCF1-204ENST00000553673 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
FCF1-204ENST00000553673 FOXK1P85037 733 aa11.96□□□□□ -0.49
FCF1-204ENST00000553673 PLPP6Q8IY26 295 aa11.96□□□□□ -0.49
FCF1-204ENST00000553673 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
FCF1-204ENST00000553673 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
FCF1-204ENST00000553673 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
FCF1-204ENST00000553673 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
FCF1-204ENST00000553673 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
FCF1-204ENST00000553673 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
FCF1-204ENST00000553673 DSG2Q14126 1118 aa11.93□□□□□ -0.5
FCF1-204ENST00000553673 ADGRD1Q6QNK2 874 aa11.91□□□□□ -0.5
FCF1-204ENST00000553673 TBC1D12O60347 775 aa11.87□□□□□ -0.51
FCF1-204ENST00000553673 PSEN2P49810 448 aa11.87□□□□□ -0.51
FCF1-204ENST00000553673 NKX1-1Q15270 411 aaPredicted RBP11.87□□□□□ -0.51
FCF1-204ENST00000553673 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
FCF1-204ENST00000553673 DMRTA1Q5VZB9 504 aa11.86□□□□□ -0.51
FCF1-204ENST00000553673 TK2O00142 265 aa11.83□□□□□ -0.52
FCF1-204ENST00000553673 DNAJC5Q9H3Z4 198 aa11.83□□□□□ -0.52
FCF1-204ENST00000553673 HCSTQ9UBK5 93 aa11.82□□□□□ -0.52
FCF1-204ENST00000553673 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
FCF1-204ENST00000553673 HRO43593 1189 aa11.8□□□□□ -0.52
FCF1-204ENST00000553673 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
FCF1-204ENST00000553673 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
FCF1-204ENST00000553673 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
FCF1-204ENST00000553673 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
FCF1-204ENST00000553673 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
FCF1-204ENST00000553673 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
FCF1-204ENST00000553673 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
FCF1-204ENST00000553673 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
FCF1-204ENST00000553673 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
FCF1-204ENST00000553673 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
FCF1-204ENST00000553673 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
FCF1-204ENST00000553673 PDE4AP27815 886 aa11.69□□□□□ -0.54
FCF1-204ENST00000553673 VPS9D1Q9Y2B5 631 aa11.69□□□□□ -0.54
FCF1-204ENST00000553673 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
FCF1-204ENST00000553673 FOSBP53539 338 aa11.67□□□□□ -0.54
FCF1-204ENST00000553673 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
FCF1-204ENST00000553673 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
FCF1-204ENST00000553673 EVI5O60447 810 aa11.63□□□□□ -0.55
FCF1-204ENST00000553673 PTPREP23469 700 aa11.63□□□□□ -0.55
FCF1-204ENST00000553673 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
FCF1-204ENST00000553673 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
FCF1-204ENST00000553673 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
FCF1-204ENST00000553673 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
FCF1-204ENST00000553673 PTPN5P54829 565 aa11.6□□□□□ -0.55
FCF1-204ENST00000553673 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
FCF1-204ENST00000553673 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
FCF1-204ENST00000553673 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
FCF1-204ENST00000553673 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
FCF1-204ENST00000553673 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
FCF1-204ENST00000553673 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
FCF1-204ENST00000553673 MFSD10Q14728 455 aa11.57□□□□□ -0.56
FCF1-204ENST00000553673 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
FCF1-204ENST00000553673 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
FCF1-204ENST00000553673 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
FCF1-204ENST00000553673 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
FCF1-204ENST00000553673 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
FCF1-204ENST00000553673 WNT2BQ93097 391 aa11.52□□□□□ -0.57
FCF1-204ENST00000553673 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
FCF1-204ENST00000553673 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
FCF1-204ENST00000553673 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
FCF1-204ENST00000553673 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
FCF1-204ENST00000553673 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
FCF1-204ENST00000553673 COL9A1P20849 921 aa11.44□□□□□ -0.58
FCF1-204ENST00000553673 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
FCF1-204ENST00000553673 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
FCF1-204ENST00000553673 RABGEF1Q9UJ41 708 aa11.43□□□□□ -0.58
FCF1-204ENST00000553673 PHF14O94880 888 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms