RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 ARHGEF40Q8TER5 1519 aa18.73■□□□□ 0.59
CCNK-202ENST00000553636 ZMYM4Q5VZL5 1548 aa18.7■□□□□ 0.58
CCNK-202ENST00000553636 CDC42BPBQ9Y5S2 1711 aa18.7■□□□□ 0.58
CCNK-202ENST00000553636 PREX2Q70Z35 1606 aa18.7■□□□□ 0.58
CCNK-202ENST00000553636 SCAPERQ9BY12 1400 aa18.69■□□□□ 0.58
CCNK-202ENST00000553636 POGZQ7Z3K3 1410 aa18.68■□□□□ 0.58
CCNK-202ENST00000553636 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
CCNK-202ENST00000553636 ZFYVE16Q7Z3T8 1539 aa18.67■□□□□ 0.58
CCNK-202ENST00000553636 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CCNK-202ENST00000553636 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
CCNK-202ENST00000553636 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
CCNK-202ENST00000553636 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
CCNK-202ENST00000553636 ADAMTSL3P82987 1691 aa18.63■□□□□ 0.57
CCNK-202ENST00000553636 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
CCNK-202ENST00000553636 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
CCNK-202ENST00000553636 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
CCNK-202ENST00000553636 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
CCNK-202ENST00000553636 ABCC1P33527 1531 aa18.6■□□□□ 0.57
CCNK-202ENST00000553636 ITSN2Q9NZM3 1697 aa18.6■□□□□ 0.57
CCNK-202ENST00000553636 MADDQ8WXG6 1647 aa18.6■□□□□ 0.57
CCNK-202ENST00000553636 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
CCNK-202ENST00000553636 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
CCNK-202ENST00000553636 KDM5CP41229 1560 aa18.59■□□□□ 0.57
CCNK-202ENST00000553636 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.56
CCNK-202ENST00000553636 HECW2Q9P2P5 1572 aa18.57■□□□□ 0.56
CCNK-202ENST00000553636 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
CCNK-202ENST00000553636 GPATCH8Q9UKJ3 1502 aaKnown RBP18.56■□□□□ 0.56
CCNK-202ENST00000553636 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
CCNK-202ENST00000553636 AFAP1Q8N556 730 aa18.55■□□□□ 0.56
CCNK-202ENST00000553636 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
CCNK-202ENST00000553636 PTPRMP28827 1452 aa18.53■□□□□ 0.56
CCNK-202ENST00000553636 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
CCNK-202ENST00000553636 ZNF777Q9ULD5 760 aaPredicted RBP18.53■□□□□ 0.56
CCNK-202ENST00000553636 TRAPPC8Q9Y2L5 1435 aa18.53■□□□□ 0.56
CCNK-202ENST00000553636 CCNB3Q8WWL7 1395 aa18.53■□□□□ 0.56
CCNK-202ENST00000553636 ATP10AO60312 1499 aa18.52■□□□□ 0.56
CCNK-202ENST00000553636 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
CCNK-202ENST00000553636 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
CCNK-202ENST00000553636 MYT1LQ9UL68 1186 aa18.52■□□□□ 0.56
CCNK-202ENST00000553636 SYCP2Q9BX26 1530 aa18.52■□□□□ 0.56
CCNK-202ENST00000553636 ABCA6Q8N139 1617 aa18.52■□□□□ 0.55
CCNK-202ENST00000553636 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
CCNK-202ENST00000553636 FER1L4A9Z1Z3 1794 aa18.49■□□□□ 0.55
CCNK-202ENST00000553636 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
CCNK-202ENST00000553636 MLH3Q9UHC1 1453 aa18.48■□□□□ 0.55
CCNK-202ENST00000553636 MLECQ14165 292 aa18.48■□□□□ 0.55
CCNK-202ENST00000553636 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
CCNK-202ENST00000553636 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
CCNK-202ENST00000553636 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.54
CCNK-202ENST00000553636 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
CCNK-202ENST00000553636 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
CCNK-202ENST00000553636 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCNK-202ENST00000553636 KIAA1107Q9UPP5 1409 aa18.42■□□□□ 0.54
CCNK-202ENST00000553636 INO80Q9ULG1 1556 aaPredicted RBP18.41■□□□□ 0.54
CCNK-202ENST00000553636 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
CCNK-202ENST00000553636 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
CCNK-202ENST00000553636 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
CCNK-202ENST00000553636 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
CCNK-202ENST00000553636 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
CCNK-202ENST00000553636 AGLP35573 1532 aa18.37■□□□□ 0.53
CCNK-202ENST00000553636 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
CCNK-202ENST00000553636 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
CCNK-202ENST00000553636 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
CCNK-202ENST00000553636 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.52
CCNK-202ENST00000553636 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
CCNK-202ENST00000553636 PLXNC1O60486 1568 aa18.31■□□□□ 0.52
CCNK-202ENST00000553636 A2MP01023 1474 aa18.3■□□□□ 0.52
CCNK-202ENST00000553636 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
CCNK-202ENST00000553636 C3P01024 1663 aa18.29■□□□□ 0.52
CCNK-202ENST00000553636 APLP2Q06481 763 aa18.28■□□□□ 0.52
CCNK-202ENST00000553636 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
CCNK-202ENST00000553636 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.52
CCNK-202ENST00000553636 PREX1Q8TCU6 1659 aa18.27■□□□□ 0.52
CCNK-202ENST00000553636 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
CCNK-202ENST00000553636 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
CCNK-202ENST00000553636 RTEL1-TNFRSF6BF6WH68 1400 aa18.25■□□□□ 0.51
CCNK-202ENST00000553636 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
CCNK-202ENST00000553636 CLTCQ00610 1675 aaKnown RBP18.23■□□□□ 0.51
CCNK-202ENST00000553636 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
CCNK-202ENST00000553636 HSPA2P54652 639 aa18.22■□□□□ 0.51
CCNK-202ENST00000553636 MIA2Q96PC5 1412 aa18.22■□□□□ 0.51
CCNK-202ENST00000553636 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
CCNK-202ENST00000553636 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
CCNK-202ENST00000553636 GGT6Q6P531 493 aa18.18■□□□□ 0.5
CCNK-202ENST00000553636 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
CCNK-202ENST00000553636 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
CCNK-202ENST00000553636 UHRF1BP1Q6BDS2 1440 aa18.17■□□□□ 0.5
CCNK-202ENST00000553636 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
CCNK-202ENST00000553636 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
CCNK-202ENST00000553636 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
CCNK-202ENST00000553636 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
CCNK-202ENST00000553636 ZMYM3Q14202 1370 aa18.14■□□□□ 0.49
CCNK-202ENST00000553636 KIF3BO15066 747 aa18.13■□□□□ 0.49
CCNK-202ENST00000553636 FGD6Q6ZV73 1430 aa18.13■□□□□ 0.49
CCNK-202ENST00000553636 NPATQ14207 1427 aa18.11■□□□□ 0.49
CCNK-202ENST00000553636 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
CCNK-202ENST00000553636 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
CCNK-202ENST00000553636 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
CCNK-202ENST00000553636 TCOF1Q13428 1488 aaKnown RBP18.09■□□□□ 0.49
CCNK-202ENST00000553636 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms