RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 ARHGEF40Q8TER5 1519 aa20.39■□□□□ 0.85
SIX1-202ENST00000553535 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
SIX1-202ENST00000553535 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
SIX1-202ENST00000553535 LRRIQ1Q96JM4 1722 aa20.36■□□□□ 0.85
SIX1-202ENST00000553535 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
SIX1-202ENST00000553535 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
SIX1-202ENST00000553535 MAGI2Q86UL8 1455 aa20.34■□□□□ 0.85
SIX1-202ENST00000553535 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
SIX1-202ENST00000553535 KIF14Q15058 1648 aa20.34■□□□□ 0.85
SIX1-202ENST00000553535 MADDQ8WXG6 1647 aa20.34■□□□□ 0.85
SIX1-202ENST00000553535 MYO5CQ9NQX4 1742 aa20.34■□□□□ 0.85
SIX1-202ENST00000553535 ZFYVE16Q7Z3T8 1539 aa20.32■□□□□ 0.84
SIX1-202ENST00000553535 POGZQ7Z3K3 1410 aa20.32■□□□□ 0.84
SIX1-202ENST00000553535 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
SIX1-202ENST00000553535 CASKIN1Q8WXD9 1431 aa20.3■□□□□ 0.84
SIX1-202ENST00000553535 SIGLEC1Q9BZZ2 1709 aa20.29■□□□□ 0.84
SIX1-202ENST00000553535 CLIP1P30622 1438 aa20.29■□□□□ 0.84
SIX1-202ENST00000553535 RIMS1Q86UR5 1692 aaKnown RBP20.26■□□□□ 0.83
SIX1-202ENST00000553535 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
SIX1-202ENST00000553535 ATP10AO60312 1499 aa20.24■□□□□ 0.83
SIX1-202ENST00000553535 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
SIX1-202ENST00000553535 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
SIX1-202ENST00000553535 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
SIX1-202ENST00000553535 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
SIX1-202ENST00000553535 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
SIX1-202ENST00000553535 MLECQ14165 292 aa20.21■□□□□ 0.83
SIX1-202ENST00000553535 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
SIX1-202ENST00000553535 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.82
SIX1-202ENST00000553535 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
SIX1-202ENST00000553535 KDM5CP41229 1560 aa20.19■□□□□ 0.82
SIX1-202ENST00000553535 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
SIX1-202ENST00000553535 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
SIX1-202ENST00000553535 ARHGEF12Q9NZN5 1544 aa20.15■□□□□ 0.82
SIX1-202ENST00000553535 CDC42BPAQ5VT25 1732 aa20.13■□□□□ 0.81
SIX1-202ENST00000553535 MLH3Q9UHC1 1453 aa20.13■□□□□ 0.81
SIX1-202ENST00000553535 TRAPPC8Q9Y2L5 1435 aa20.13■□□□□ 0.81
SIX1-202ENST00000553535 MYT1LQ9UL68 1186 aa20.12■□□□□ 0.81
SIX1-202ENST00000553535 ABCC1P33527 1531 aa20.12■□□□□ 0.81
SIX1-202ENST00000553535 DIP2CQ9Y2E4 1556 aa20.11■□□□□ 0.81
SIX1-202ENST00000553535 HSPA2P54652 639 aa20.1■□□□□ 0.81
SIX1-202ENST00000553535 ITSN2Q9NZM3 1697 aa20.09■□□□□ 0.81
SIX1-202ENST00000553535 REREQ9P2R6 1566 aa20.09■□□□□ 0.81
SIX1-202ENST00000553535 GPATCH8Q9UKJ3 1502 aaKnown RBP20.08■□□□□ 0.81
SIX1-202ENST00000553535 ABCA6Q8N139 1617 aa20.08■□□□□ 0.8
SIX1-202ENST00000553535 CEBPAP49715 358 aaPredicted RBP20.07■□□□□ 0.8
SIX1-202ENST00000553535 ZNF777Q9ULD5 760 aaPredicted RBP20.05■□□□□ 0.8
SIX1-202ENST00000553535 KIDINS220Q9ULH0 1771 aa20.05■□□□□ 0.8
SIX1-202ENST00000553535 AGLP35573 1532 aa20.04■□□□□ 0.8
SIX1-202ENST00000553535 SAMD9LQ8IVG5 1584 aa20.03■□□□□ 0.8
SIX1-202ENST00000553535 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
SIX1-202ENST00000553535 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
SIX1-202ENST00000553535 FBXO41Q8TF61 875 aa20.02■□□□□ 0.8
SIX1-202ENST00000553535 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
SIX1-202ENST00000553535 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
SIX1-202ENST00000553535 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
SIX1-202ENST00000553535 KIAA1107Q9UPP5 1409 aa19.99■□□□□ 0.79
SIX1-202ENST00000553535 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
SIX1-202ENST00000553535 SYCP2Q9BX26 1530 aa19.99■□□□□ 0.79
SIX1-202ENST00000553535 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
SIX1-202ENST00000553535 SPAG9O60271 1321 aaKnown RBP19.97■□□□□ 0.79
SIX1-202ENST00000553535 PLEKHH2Q8IVE3 1493 aa19.96■□□□□ 0.79
SIX1-202ENST00000553535 C3P01024 1663 aa19.95■□□□□ 0.78
SIX1-202ENST00000553535 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
SIX1-202ENST00000553535 EHBP1L1Q8N3D4 1523 aa19.92■□□□□ 0.78
SIX1-202ENST00000553535 UHRF1BP1Q6BDS2 1440 aa19.92■□□□□ 0.78
SIX1-202ENST00000553535 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
SIX1-202ENST00000553535 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
SIX1-202ENST00000553535 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
SIX1-202ENST00000553535 CNTLNQ9NXG0 1405 aa19.9■□□□□ 0.78
SIX1-202ENST00000553535 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
SIX1-202ENST00000553535 SUPT6HQ7KZ85 1726 aaKnown RBP19.89■□□□□ 0.77
SIX1-202ENST00000553535 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
SIX1-202ENST00000553535 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
SIX1-202ENST00000553535 A2MP01023 1474 aa19.87■□□□□ 0.77
SIX1-202ENST00000553535 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
SIX1-202ENST00000553535 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
SIX1-202ENST00000553535 PLXNC1O60486 1568 aa19.86■□□□□ 0.77
SIX1-202ENST00000553535 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
SIX1-202ENST00000553535 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
SIX1-202ENST00000553535 MROH2AA6NES4 1674 aa19.84■□□□□ 0.77
SIX1-202ENST00000553535 RTEL1-TNFRSF6BF6WH68 1400 aa19.82■□□□□ 0.76
SIX1-202ENST00000553535 NPATQ14207 1427 aa19.82■□□□□ 0.76
SIX1-202ENST00000553535 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
SIX1-202ENST00000553535 ADGBQ8N7X0 1667 aa19.81■□□□□ 0.76
SIX1-202ENST00000553535 GGT6Q6P531 493 aa19.8■□□□□ 0.76
SIX1-202ENST00000553535 CLTCQ00610 1675 aaKnown RBP19.79■□□□□ 0.76
SIX1-202ENST00000553535 RSPH4AQ5TD94 716 aa19.78■□□□□ 0.76
SIX1-202ENST00000553535 PTPRTO14522 1441 aa19.77■□□□□ 0.76
SIX1-202ENST00000553535 VPS8Q8N3P4 1428 aa19.77■□□□□ 0.76
SIX1-202ENST00000553535 DHX29Q7Z478 1369 aaKnown RBP19.77■□□□□ 0.76
SIX1-202ENST00000553535 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
SIX1-202ENST00000553535 CCDC141Q6ZP82 1450 aa19.75■□□□□ 0.75
SIX1-202ENST00000553535 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
SIX1-202ENST00000553535 NCOA1Q15788 1441 aa19.74■□□□□ 0.75
SIX1-202ENST00000553535 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
SIX1-202ENST00000553535 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
SIX1-202ENST00000553535 CAMSAP1Q5T5Y3 1602 aa19.7■□□□□ 0.74
SIX1-202ENST00000553535 KIF3BO15066 747 aa19.7■□□□□ 0.74
SIX1-202ENST00000553535 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
SIX1-202ENST00000553535 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms