RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.92
ACTN1-207ENST00000553290 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
ACTN1-207ENST00000553290 POGZQ7Z3K3 1410 aa20.81■□□□□ 0.92
ACTN1-207ENST00000553290 CDC42BPBQ9Y5S2 1711 aa20.79■□□□□ 0.92
ACTN1-207ENST00000553290 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
ACTN1-207ENST00000553290 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
ACTN1-207ENST00000553290 ARID4BQ4LE39 1312 aaPredicted RBP20.78■□□□□ 0.92
ACTN1-207ENST00000553290 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
ACTN1-207ENST00000553290 BCORL1Q5H9F3 1711 aa20.75■□□□□ 0.91
ACTN1-207ENST00000553290 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
ACTN1-207ENST00000553290 YEATS2Q9ULM3 1422 aa20.75■□□□□ 0.91
ACTN1-207ENST00000553290 CDC42BPAQ5VT25 1732 aa20.73■□□□□ 0.91
ACTN1-207ENST00000553290 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
ACTN1-207ENST00000553290 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
ACTN1-207ENST00000553290 AFAP1Q8N556 730 aa20.7■□□□□ 0.9
ACTN1-207ENST00000553290 KDM5CP41229 1560 aa20.7■□□□□ 0.9
ACTN1-207ENST00000553290 ATP10AO60312 1499 aa20.69■□□□□ 0.9
ACTN1-207ENST00000553290 ABCC1P33527 1531 aa20.68■□□□□ 0.9
ACTN1-207ENST00000553290 PTPRMP28827 1452 aa20.68■□□□□ 0.9
ACTN1-207ENST00000553290 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
ACTN1-207ENST00000553290 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
ACTN1-207ENST00000553290 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
ACTN1-207ENST00000553290 ITSN2Q9NZM3 1697 aa20.66■□□□□ 0.9
ACTN1-207ENST00000553290 HECW2Q9P2P5 1572 aa20.65■□□□□ 0.9
ACTN1-207ENST00000553290 EHBP1L1Q8N3D4 1523 aa20.65■□□□□ 0.9
ACTN1-207ENST00000553290 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
ACTN1-207ENST00000553290 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
ACTN1-207ENST00000553290 SIGLEC1Q9BZZ2 1709 aa20.64■□□□□ 0.9
ACTN1-207ENST00000553290 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
ACTN1-207ENST00000553290 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
ACTN1-207ENST00000553290 MLH3Q9UHC1 1453 aa20.63■□□□□ 0.89
ACTN1-207ENST00000553290 TRAPPC8Q9Y2L5 1435 aa20.63■□□□□ 0.89
ACTN1-207ENST00000553290 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
ACTN1-207ENST00000553290 SAMD9LQ8IVG5 1584 aa20.62■□□□□ 0.89
ACTN1-207ENST00000553290 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
ACTN1-207ENST00000553290 PLEKHH2Q8IVE3 1493 aa20.6■□□□□ 0.89
ACTN1-207ENST00000553290 RIMS1Q86UR5 1692 aaKnown RBP20.6■□□□□ 0.89
ACTN1-207ENST00000553290 DIP2CQ9Y2E4 1556 aa20.59■□□□□ 0.89
ACTN1-207ENST00000553290 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
ACTN1-207ENST00000553290 MLECQ14165 292 aa20.58■□□□□ 0.89
ACTN1-207ENST00000553290 REREQ9P2R6 1566 aa20.58■□□□□ 0.88
ACTN1-207ENST00000553290 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.88
ACTN1-207ENST00000553290 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
ACTN1-207ENST00000553290 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
ACTN1-207ENST00000553290 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.88
ACTN1-207ENST00000553290 FER1L4A9Z1Z3 1794 aa20.55■□□□□ 0.88
ACTN1-207ENST00000553290 KIDINS220Q9ULH0 1771 aa20.55■□□□□ 0.88
ACTN1-207ENST00000553290 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
ACTN1-207ENST00000553290 SPAG9O60271 1321 aaKnown RBP20.53■□□□□ 0.88
ACTN1-207ENST00000553290 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
ACTN1-207ENST00000553290 AGLP35573 1532 aa20.51■□□□□ 0.87
ACTN1-207ENST00000553290 MAP3K1Q13233 1512 aa20.5■□□□□ 0.87
ACTN1-207ENST00000553290 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
ACTN1-207ENST00000553290 ZNF644Q9H582 1327 aaPredicted RBP20.48■□□□□ 0.87
ACTN1-207ENST00000553290 ATP7AQ04656 1500 aa20.48■□□□□ 0.87
ACTN1-207ENST00000553290 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
ACTN1-207ENST00000553290 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
ACTN1-207ENST00000553290 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
ACTN1-207ENST00000553290 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
ACTN1-207ENST00000553290 ESF1Q9H501 851 aaKnown RBP20.42■□□□□ 0.86
ACTN1-207ENST00000553290 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
ACTN1-207ENST00000553290 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
ACTN1-207ENST00000553290 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
ACTN1-207ENST00000553290 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
ACTN1-207ENST00000553290 APLP2Q06481 763 aa20.4■□□□□ 0.86
ACTN1-207ENST00000553290 A2MP01023 1474 aa20.39■□□□□ 0.85
ACTN1-207ENST00000553290 ADGBQ8N7X0 1667 aa20.38■□□□□ 0.85
ACTN1-207ENST00000553290 CCDC141Q6ZP82 1450 aa20.38■□□□□ 0.85
ACTN1-207ENST00000553290 CEBPAP49715 358 aaPredicted RBP20.38■□□□□ 0.85
ACTN1-207ENST00000553290 PLXNC1O60486 1568 aa20.38■□□□□ 0.85
ACTN1-207ENST00000553290 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
ACTN1-207ENST00000553290 SETD1BQ9UPS6 1966 aaKnown RBP20.35■□□□□ 0.85
ACTN1-207ENST00000553290 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
ACTN1-207ENST00000553290 C3P01024 1663 aa20.34■□□□□ 0.85
ACTN1-207ENST00000553290 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
ACTN1-207ENST00000553290 MIA2Q96PC5 1412 aa20.34■□□□□ 0.85
ACTN1-207ENST00000553290 MYOM3Q5VTT5 1437 aa20.33■□□□□ 0.84
ACTN1-207ENST00000553290 TSPY4P0CV99 314 aa20.32■□□□□ 0.84
ACTN1-207ENST00000553290 TSPY10P0CW01 314 aa20.32■□□□□ 0.84
ACTN1-207ENST00000553290 HSPA2P54652 639 aa20.32■□□□□ 0.84
ACTN1-207ENST00000553290 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
ACTN1-207ENST00000553290 MROH2AA6NES4 1674 aa20.3■□□□□ 0.84
ACTN1-207ENST00000553290 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
ACTN1-207ENST00000553290 GGT6Q6P531 493 aa20.29■□□□□ 0.84
ACTN1-207ENST00000553290 UHRF1BP1Q6BDS2 1440 aa20.28■□□□□ 0.84
ACTN1-207ENST00000553290 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
ACTN1-207ENST00000553290 CLTCQ00610 1675 aaKnown RBP20.25■□□□□ 0.83
ACTN1-207ENST00000553290 NPATQ14207 1427 aa20.24■□□□□ 0.83
ACTN1-207ENST00000553290 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
ACTN1-207ENST00000553290 KIF3BO15066 747 aa20.22■□□□□ 0.83
ACTN1-207ENST00000553290 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
ACTN1-207ENST00000553290 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
ACTN1-207ENST00000553290 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
ACTN1-207ENST00000553290 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
ACTN1-207ENST00000553290 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
ACTN1-207ENST00000553290 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
ACTN1-207ENST00000553290 TCOF1Q13428 1488 aaKnown RBP20.15■□□□□ 0.82
ACTN1-207ENST00000553290 KDM5DQ9BY66 1539 aa20.14■□□□□ 0.81
ACTN1-207ENST00000553290 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
ACTN1-207ENST00000553290 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms