RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	RB1CC1	Q8TDY2	1594 aa		11.67	□□□□□ -0.54
PFKM-231	ENST00000553055	PLEKHG3	A1L390	1219 aa		11.67	□□□□□ -0.54
PFKM-231	ENST00000553055	LARP6	Q9BRS8	491 aa	Known RBP	11.67	□□□□□ -0.54
PFKM-231	ENST00000553055	MTMR7	Q9Y216	660 aa		11.66	□□□□□ -0.54
PFKM-231	ENST00000553055	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.65	□□□□□ -0.54
PFKM-231	ENST00000553055	MNX1	P50219	401 aa	Predicted RBP	11.65	□□□□□ -0.54
PFKM-231	ENST00000553055	MFSD10	Q14728	455 aa		11.65	□□□□□ -0.54
PFKM-231	ENST00000553055	PPP1R37	O75864	691 aa		11.64	□□□□□ -0.55
PFKM-231	ENST00000553055	MFAP1	P55081	439 aa	Known RBP	11.64	□□□□□ -0.55
PFKM-231	ENST00000553055	NLRP6	P59044	892 aa		11.64	□□□□□ -0.55
PFKM-231	ENST00000553055	IGSF3	O75054	1194 aa		11.63	□□□□□ -0.55
PFKM-231	ENST00000553055	RBM25	P49756	843 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-231	ENST00000553055	DDX27	Q96GQ7	796 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-231	ENST00000553055	CREBZF	Q9NS37	354 aa		11.62	□□□□□ -0.55
PFKM-231	ENST00000553055	NCKAP5L	Q9HCH0	1330 aa		11.61	□□□□□ -0.55
PFKM-231	ENST00000553055	PROSER2	Q86WR7	435 aa	Predicted RBP	11.61	□□□□□ -0.55
PFKM-231	ENST00000553055	MLLT3	P42568	568 aa	Predicted RBP	11.6	□□□□□ -0.55
PFKM-231	ENST00000553055	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.6	□□□□□ -0.55
PFKM-231	ENST00000553055	DSG3	P32926	999 aa		11.59	□□□□□ -0.55
PFKM-231	ENST00000553055	CAMK2B	Q13554	666 aa		11.59	□□□□□ -0.55
PFKM-231	ENST00000553055	GZF1	Q9H116	711 aa	Predicted RBP	11.59	□□□□□ -0.55
PFKM-231	ENST00000553055	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.59	□□□□□ -0.55
PFKM-231	ENST00000553055	MCM6	Q14566	821 aa		11.58	□□□□□ -0.56
PFKM-231	ENST00000553055	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.58	□□□□□ -0.56
PFKM-231	ENST00000553055	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.58	□□□□□ -0.56
PFKM-231	ENST00000553055	AMHR2	Q16671	573 aa		11.57	□□□□□ -0.56
PFKM-231	ENST00000553055	PATL2	C9JE40	543 aa	Known RBP	11.56	□□□□□ -0.56
PFKM-231	ENST00000553055	PDE4C	Q08493	712 aa		11.56	□□□□□ -0.56
PFKM-231	ENST00000553055		E9PSI1	815 aa		11.55	□□□□□ -0.56
PFKM-231	ENST00000553055	RETREG2	Q8NC44	543 aa		11.55	□□□□□ -0.56
PFKM-231	ENST00000553055	FBXO22	Q8NEZ5	403 aa		11.55	□□□□□ -0.56
PFKM-231	ENST00000553055	CECR2	Q9BXF3	1484 aa		11.55	□□□□□ -0.56
PFKM-231	ENST00000553055	SOX12	O15370	315 aa		11.54	□□□□□ -0.56
PFKM-231	ENST00000553055	HSP90B1	P14625	803 aa	Known RBP	11.54	□□□□□ -0.56
PFKM-231	ENST00000553055	PSEN1	P49768	467 aa		11.54	□□□□□ -0.56
PFKM-231	ENST00000553055	PARP9	Q8IXQ6	854 aa		11.54	□□□□□ -0.56
PFKM-231	ENST00000553055	FBXW7	Q969H0	707 aa		11.54	□□□□□ -0.56
PFKM-231	ENST00000553055	PRR29	P0C7W0	189 aa		11.53	□□□□□ -0.56
PFKM-231	ENST00000553055	CDK11B	P21127	795 aa	Known RBP	11.53	□□□□□ -0.56
PFKM-231	ENST00000553055	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.53	□□□□□ -0.56
PFKM-231	ENST00000553055	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.53	□□□□□ -0.56
PFKM-231	ENST00000553055	CRISPLD2	Q9H0B8	497 aa		11.53	□□□□□ -0.56
PFKM-231	ENST00000553055	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.53	□□□□□ -0.56
PFKM-231	ENST00000553055	MAP2K5	Q13163	448 aa		11.52	□□□□□ -0.57
PFKM-231	ENST00000553055	CCDC102A	Q96A19	550 aa		11.52	□□□□□ -0.57
PFKM-231	ENST00000553055	PCDHB8	Q9UN66	801 aa		11.48	□□□□□ -0.57
PFKM-231	ENST00000553055	PCDHB13	Q9Y5F0	798 aa		11.48	□□□□□ -0.57
PFKM-231	ENST00000553055	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.47	□□□□□ -0.57
PFKM-231	ENST00000553055	GPR37	O15354	613 aa		11.47	□□□□□ -0.57
PFKM-231	ENST00000553055	TTLL12	Q14166	644 aa	Predicted RBP	11.47	□□□□□ -0.57
PFKM-231	ENST00000553055	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.47	□□□□□ -0.57
PFKM-231	ENST00000553055	IRF6	O14896	467 aa		11.46	□□□□□ -0.57
PFKM-231	ENST00000553055	PPP1R15A	O75807	674 aa	Predicted RBP	11.46	□□□□□ -0.57
PFKM-231	ENST00000553055	EFCAB3	Q8N7B9	438 aa		11.46	□□□□□ -0.57
PFKM-231	ENST00000553055	PHF8	Q9UPP1	1060 aa		11.46	□□□□□ -0.57
PFKM-231	ENST00000553055	ZNF579	Q8NAF0	562 aa	Known RBP	11.44	□□□□□ -0.58
PFKM-231	ENST00000553055	ZNF428	Q96B54	188 aa		11.44	□□□□□ -0.58
PFKM-231	ENST00000553055	IRF5	Q13568	498 aa		11.43	□□□□□ -0.58
PFKM-231	ENST00000553055	CLEC11A	Q9Y240	323 aa		11.43	□□□□□ -0.58
PFKM-231	ENST00000553055	PLSCR2	Q9NRY7	297 aa		11.42	□□□□□ -0.58
PFKM-231	ENST00000553055	BICRA	Q9NZM4	1560 aa		11.41	□□□□□ -0.58
PFKM-231	ENST00000553055	ACIN1	Q9UKV3	1341 aa	Known RBP	11.41	□□□□□ -0.58
PFKM-231	ENST00000553055	NACAD	O15069	1562 aa		11.41	□□□□□ -0.58
PFKM-231	ENST00000553055	CC2D2A	Q9P2K1	1620 aa		11.4	□□□□□ -0.58
PFKM-231	ENST00000553055	SH3D19	Q5HYK7	790 aa		11.4	□□□□□ -0.58
PFKM-231	ENST00000553055	PUS7	Q96PZ0	661 aa	Known RBP	11.4	□□□□□ -0.58
PFKM-231	ENST00000553055	CABP2	Q9NPB3	220 aa		11.4	□□□□□ -0.58
PFKM-231	ENST00000553055	PDIA6	Q15084	440 aa		11.39	□□□□□ -0.59
PFKM-231	ENST00000553055	POM121	Q96HA1	1249 aa		11.38	□□□□□ -0.59
PFKM-231	ENST00000553055	NUTM2F	A1L443	756 aa		11.37	□□□□□ -0.59
PFKM-231	ENST00000553055	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.37	□□□□□ -0.59
PFKM-231	ENST00000553055	AMOTL2	Q9Y2J4	779 aa		11.37	□□□□□ -0.59
PFKM-231	ENST00000553055	GNPAT	O15228	680 aa		11.36	□□□□□ -0.59
PFKM-231	ENST00000553055	KCNA1	Q09470	495 aa		11.36	□□□□□ -0.59
PFKM-231	ENST00000553055	DPYSL4	O14531	572 aa		11.35	□□□□□ -0.59
PFKM-231	ENST00000553055	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.35	□□□□□ -0.59
PFKM-231	ENST00000553055	PPP1R15B	Q5SWA1	713 aa		11.34	□□□□□ -0.59
PFKM-231	ENST00000553055	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.34	□□□□□ -0.59
PFKM-231	ENST00000553055	SPDYE5	A6NIY4	337 aa		11.33	□□□□□ -0.6
PFKM-231	ENST00000553055	MYT1L	Q9UL68	1186 aa		11.33	□□□□□ -0.6
PFKM-231	ENST00000553055	HIC1	Q14526	733 aa		11.32	□□□□□ -0.6
PFKM-231	ENST00000553055	USP35	Q9P2H5	1018 aa		11.32	□□□□□ -0.6
PFKM-231	ENST00000553055	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.32	□□□□□ -0.6
PFKM-231	ENST00000553055	CUX2	O14529	1486 aa		11.32	□□□□□ -0.6
PFKM-231	ENST00000553055	EIF5B	O60841	1220 aa	Known RBP	11.31	□□□□□ -0.6
PFKM-231	ENST00000553055	WWC1	Q8IX03	1113 aa		11.31	□□□□□ -0.6
PFKM-231	ENST00000553055	UNC13A	Q9UPW8	1703 aa		11.31	□□□□□ -0.6
PFKM-231	ENST00000553055	BRD1	O95696	1058 aa		11.3	□□□□□ -0.6
PFKM-231	ENST00000553055	MS4A1	P11836	297 aa		11.3	□□□□□ -0.6
PFKM-231	ENST00000553055	SKIV2L	Q15477	1246 aa	Known RBP	11.3	□□□□□ -0.6
PFKM-231	ENST00000553055	COG6	Q9Y2V7	657 aa		11.3	□□□□□ -0.6
PFKM-231	ENST00000553055	FCHSD2	O94868	740 aa		11.28	□□□□□ -0.6
PFKM-231	ENST00000553055	RSPH4A	Q5TD94	716 aa		11.28	□□□□□ -0.6
PFKM-231	ENST00000553055	CCDC27	Q2M243	656 aa		11.26	□□□□□ -0.61
PFKM-231	ENST00000553055	UST	Q9Y2C2	406 aa		11.25	□□□□□ -0.61
PFKM-231	ENST00000553055	OXER1	Q8TDS5	423 aa		11.23	□□□□□ -0.61
PFKM-231	ENST00000553055	AKT1S1	Q96B36	256 aa		11.23	□□□□□ -0.61
PFKM-231	ENST00000553055	MS4A4A	Q96JQ5	239 aa		11.23	□□□□□ -0.61
PFKM-231	ENST00000553055	CALR3	Q96L12	384 aa	Known RBP	11.23	□□□□□ -0.61
PFKM-231	ENST00000553055	GPHN	Q9NQX3	736 aa	Predicted RBP	11.23	□□□□□ -0.61

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