RNA–Protein interactions for RNA: ENST00000553040.5

LMBR1L-229, Transcript of limb development membrane protein 1 like, humanhuman

TSL 5

Gene LMBR1L, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-229ENST00000553040 ARHGAP5Q13017 1502 aa17.24■□□□□ 0.35
LMBR1L-229ENST00000553040 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
LMBR1L-229ENST00000553040 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
LMBR1L-229ENST00000553040 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
LMBR1L-229ENST00000553040 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
LMBR1L-229ENST00000553040 MTUS2Q5JR59 1369 aa17.18■□□□□ 0.34
LMBR1L-229ENST00000553040 ARHGEF40Q8TER5 1519 aa17.18■□□□□ 0.34
LMBR1L-229ENST00000553040 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
LMBR1L-229ENST00000553040 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
LMBR1L-229ENST00000553040 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
LMBR1L-229ENST00000553040 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
LMBR1L-229ENST00000553040 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
LMBR1L-229ENST00000553040 MAGI2Q86UL8 1455 aa17.15■□□□□ 0.34
LMBR1L-229ENST00000553040 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
LMBR1L-229ENST00000553040 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
LMBR1L-229ENST00000553040 ABCC1P33527 1531 aa17.13■□□□□ 0.33
LMBR1L-229ENST00000553040 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
LMBR1L-229ENST00000553040 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
LMBR1L-229ENST00000553040 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
LMBR1L-229ENST00000553040 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
LMBR1L-229ENST00000553040 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
LMBR1L-229ENST00000553040 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
LMBR1L-229ENST00000553040 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
LMBR1L-229ENST00000553040 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
LMBR1L-229ENST00000553040 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
LMBR1L-229ENST00000553040 KDM5CP41229 1560 aa17.11■□□□□ 0.33
LMBR1L-229ENST00000553040 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
LMBR1L-229ENST00000553040 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
LMBR1L-229ENST00000553040 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
LMBR1L-229ENST00000553040 ATP10AO60312 1499 aa17.08■□□□□ 0.32
LMBR1L-229ENST00000553040 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
LMBR1L-229ENST00000553040 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
LMBR1L-229ENST00000553040 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
LMBR1L-229ENST00000553040 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
LMBR1L-229ENST00000553040 MLH3Q9UHC1 1453 aa17.05■□□□□ 0.32
LMBR1L-229ENST00000553040 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
LMBR1L-229ENST00000553040 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
LMBR1L-229ENST00000553040 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
LMBR1L-229ENST00000553040 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
LMBR1L-229ENST00000553040 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
LMBR1L-229ENST00000553040 MLECQ14165 292 aa17.04■□□□□ 0.32
LMBR1L-229ENST00000553040 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
LMBR1L-229ENST00000553040 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
LMBR1L-229ENST00000553040 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
LMBR1L-229ENST00000553040 PTPRMP28827 1452 aa17.03■□□□□ 0.32
LMBR1L-229ENST00000553040 KIAA1107Q9UPP5 1409 aa17.03■□□□□ 0.32
LMBR1L-229ENST00000553040 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
LMBR1L-229ENST00000553040 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.32
LMBR1L-229ENST00000553040 MAP3K1Q13233 1512 aa17.02■□□□□ 0.32
LMBR1L-229ENST00000553040 PLEKHH2Q8IVE3 1493 aa17.02■□□□□ 0.32
LMBR1L-229ENST00000553040 RIMS1Q86UR5 1692 aaKnown RBP17.01■□□□□ 0.31
LMBR1L-229ENST00000553040 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
LMBR1L-229ENST00000553040 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
LMBR1L-229ENST00000553040 MBD5Q9P267 1494 aa16.97■□□□□ 0.31
LMBR1L-229ENST00000553040 FER1L4A9Z1Z3 1794 aa16.96■□□□□ 0.31
LMBR1L-229ENST00000553040 APLP2Q06481 763 aa16.95■□□□□ 0.3
LMBR1L-229ENST00000553040 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
LMBR1L-229ENST00000553040 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
LMBR1L-229ENST00000553040 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
LMBR1L-229ENST00000553040 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
LMBR1L-229ENST00000553040 AGLP35573 1532 aa16.92■□□□□ 0.3
LMBR1L-229ENST00000553040 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
LMBR1L-229ENST00000553040 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
LMBR1L-229ENST00000553040 CCDC141Q6ZP82 1450 aa16.88■□□□□ 0.29
LMBR1L-229ENST00000553040 A2MP01023 1474 aa16.87■□□□□ 0.29
LMBR1L-229ENST00000553040 CEBPAP49715 358 aaPredicted RBP16.87■□□□□ 0.29
LMBR1L-229ENST00000553040 RSPH4AQ5TD94 716 aa16.87■□□□□ 0.29
LMBR1L-229ENST00000553040 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
LMBR1L-229ENST00000553040 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
LMBR1L-229ENST00000553040 ADGBQ8N7X0 1667 aa16.86■□□□□ 0.29
LMBR1L-229ENST00000553040 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
LMBR1L-229ENST00000553040 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
LMBR1L-229ENST00000553040 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.28
LMBR1L-229ENST00000553040 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
LMBR1L-229ENST00000553040 TSPY4P0CV99 314 aa16.82■□□□□ 0.28
LMBR1L-229ENST00000553040 TSPY10P0CW01 314 aa16.82■□□□□ 0.28
LMBR1L-229ENST00000553040 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
LMBR1L-229ENST00000553040 C3P01024 1663 aa16.81■□□□□ 0.28
LMBR1L-229ENST00000553040 GGT6Q6P531 493 aa16.8■□□□□ 0.28
LMBR1L-229ENST00000553040 PTPN23Q9H3S7 1636 aa16.79■□□□□ 0.28
LMBR1L-229ENST00000553040 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
LMBR1L-229ENST00000553040 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
LMBR1L-229ENST00000553040 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
LMBR1L-229ENST00000553040 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.28
LMBR1L-229ENST00000553040 HSPA2P54652 639 aa16.77■□□□□ 0.28
LMBR1L-229ENST00000553040 CLTCQ00610 1675 aaKnown RBP16.76■□□□□ 0.27
LMBR1L-229ENST00000553040 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
LMBR1L-229ENST00000553040 PREX1Q8TCU6 1659 aa16.75■□□□□ 0.27
LMBR1L-229ENST00000553040 KIF3BO15066 747 aa16.75■□□□□ 0.27
LMBR1L-229ENST00000553040 ZMYM3Q14202 1370 aa16.75■□□□□ 0.27
LMBR1L-229ENST00000553040 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
LMBR1L-229ENST00000553040 ABCC5O15440 1437 aa16.74■□□□□ 0.27
LMBR1L-229ENST00000553040 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
LMBR1L-229ENST00000553040 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
LMBR1L-229ENST00000553040 DAPK1P53355 1430 aa16.7■□□□□ 0.26
LMBR1L-229ENST00000553040 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
LMBR1L-229ENST00000553040 PPARGC1BQ86YN6 1023 aaKnown RBP16.7■□□□□ 0.26
LMBR1L-229ENST00000553040 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
LMBR1L-229ENST00000553040 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
LMBR1L-229ENST00000553040 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms