RNA–Protein interactions for RNA: ENST00000552943.5

WDR90-224, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 5,498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-224ENST00000552943 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
WDR90-224ENST00000552943 NCLP19338 710 aaKnown RBP25.23■■□□□ 1.63
WDR90-224ENST00000552943 SRPK2P78362 688 aaKnown RBP25.23■■□□□ 1.63
WDR90-224ENST00000552943 GGT6Q6P531 493 aa25.23■■□□□ 1.63
WDR90-224ENST00000552943 HDGFP51858 240 aaKnown RBP25.22■■□□□ 1.63
WDR90-224ENST00000552943 RALBP1Q15311 655 aa25.21■■□□□ 1.63
WDR90-224ENST00000552943 L3MBTL2Q969R5 705 aa25.2■■□□□ 1.62
WDR90-224ENST00000552943 HAP1P54257 671 aaPredicted RBP25.19■■□□□ 1.62
WDR90-224ENST00000552943 NOP58Q9Y2X3 529 aaKnown RBP25.18■■□□□ 1.62
WDR90-224ENST00000552943 DHX57Q6P158 1386 aaKnown RBP25.16■■□□□ 1.62
WDR90-224ENST00000552943 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
WDR90-224ENST00000552943 RSPH4AQ5TD94 716 aa25.16■■□□□ 1.62
WDR90-224ENST00000552943 ERICH6BQ5W0A0 696 aa25.16■■□□□ 1.62
WDR90-224ENST00000552943 SAFB2Q14151 953 aaKnown RBP eCLIP25.14■■□□□ 1.62
WDR90-224ENST00000552943 MLECQ14165 292 aa25.14■■□□□ 1.61
WDR90-224ENST00000552943 HNRNPMP52272 730 aaKnown RBP eCLIP25.14■■□□□ 1.61
WDR90-224ENST00000552943 LMOD2Q6P5Q4 547 aa25.12■■□□□ 1.61
WDR90-224ENST00000552943 TRIM44Q96DX7 344 aaPredicted RBP25.12■■□□□ 1.61
WDR90-224ENST00000552943 JPH4Q96JJ6 628 aa25.09■■□□□ 1.61
WDR90-224ENST00000552943 STK26Q9P289 416 aa25.08■■□□□ 1.61
WDR90-224ENST00000552943 EIF3AQ14152 1382 aaKnown RBP25.08■■□□□ 1.6
WDR90-224ENST00000552943 HDGFL2Q7Z4V5 671 aaPredicted RBP25.07■■□□□ 1.6
WDR90-224ENST00000552943 RCAN3Q9UKA8 241 aa25.06■■□□□ 1.6
WDR90-224ENST00000552943 KIF3BO15066 747 aa25.04■■□□□ 1.6
WDR90-224ENST00000552943 SPAG9O60271 1321 aaKnown RBP25.02■■□□□ 1.6
WDR90-224ENST00000552943 RBM19Q9Y4C8 960 aaKnown RBP25.01■■□□□ 1.59
WDR90-224ENST00000552943 HSP90AB1P08238 724 aaKnown RBP24.98■■□□□ 1.59
WDR90-224ENST00000552943 SOX12O15370 315 aa24.98■■□□□ 1.59
WDR90-224ENST00000552943 OS9Q13438 667 aaPredicted RBP24.97■■□□□ 1.59
WDR90-224ENST00000552943 IGF1RP08069 1367 aa24.97■■□□□ 1.59
WDR90-224ENST00000552943 U2AF1L5P0DN76 240 aaPredicted RBP24.97■■□□□ 1.59
WDR90-224ENST00000552943 U2AF1Q01081 240 aaKnown RBP eCLIP24.97■■□□□ 1.59
WDR90-224ENST00000552943 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
WDR90-224ENST00000552943 NLRP13Q86W25 1043 aa24.96■■□□□ 1.59
WDR90-224ENST00000552943 IPO8O15397 1037 aaKnown RBP24.95■■□□□ 1.58
WDR90-224ENST00000552943 RTF1Q92541 710 aaKnown RBP24.92■■□□□ 1.58
WDR90-224ENST00000552943 CALD1Q05682 793 aaKnown RBP24.91■■□□□ 1.58
WDR90-224ENST00000552943 HSCBQ8IWL3 235 aa24.91■■□□□ 1.58
WDR90-224ENST00000552943 ZRSR1Q15695 479 aaKnown RBP24.9■■□□□ 1.58
WDR90-224ENST00000552943 PTMAP06454 111 aaKnown RBP24.89■■□□□ 1.58
WDR90-224ENST00000552943 CCDC144AA2RUR9 1427 aa24.89■■□□□ 1.58
WDR90-224ENST00000552943 KIF15Q9NS87 1388 aa24.89■■□□□ 1.57
WDR90-224ENST00000552943 PDE3BQ13370 1112 aa24.89■■□□□ 1.57
WDR90-224ENST00000552943 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
WDR90-224ENST00000552943 TCERG1O14776 1098 aaKnown RBP24.87■■□□□ 1.57
WDR90-224ENST00000552943 TRHP20396 242 aaPredicted RBP24.87■■□□□ 1.57
WDR90-224ENST00000552943 PHLDB1Q86UU1 1377 aa24.87■■□□□ 1.57
WDR90-224ENST00000552943 CFAP44Q96MT7 982 aa24.87■■□□□ 1.57
WDR90-224ENST00000552943 GOLGA2Q08379 1002 aa24.86■■□□□ 1.57
WDR90-224ENST00000552943 WASHC2CQ9Y4E1 1318 aa24.86■■□□□ 1.57
WDR90-224ENST00000552943 ST20-MTHFSA0A0A6YYL1 179 aa24.85■■□□□ 1.57
WDR90-224ENST00000552943 TERF2IPQ9NYB0 399 aa24.85■■□□□ 1.57
WDR90-224ENST00000552943 PTPRGP23470 1445 aa24.85■■□□□ 1.57
WDR90-224ENST00000552943 RWDD1Q9H446 243 aaPredicted RBP24.84■■□□□ 1.57
WDR90-224ENST00000552943 TPRNQ4KMQ1 711 aa24.84■■□□□ 1.57
WDR90-224ENST00000552943 KIF21BO75037 1637 aa24.84■■□□□ 1.57
WDR90-224ENST00000552943 KCNJ4P48050 445 aa24.83■■□□□ 1.57
WDR90-224ENST00000552943 MYBBP1AQ9BQG0 1328 aaKnown RBP24.83■■□□□ 1.57
WDR90-224ENST00000552943 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
WDR90-224ENST00000552943 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
WDR90-224ENST00000552943 ITPRIPQ8IWB1 547 aa24.8■■□□□ 1.56
WDR90-224ENST00000552943 MCCP23508 829 aa24.79■■□□□ 1.56
WDR90-224ENST00000552943 FGD1P98174 961 aa24.79■■□□□ 1.56
WDR90-224ENST00000552943 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
WDR90-224ENST00000552943 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
WDR90-224ENST00000552943 CCDC146Q8IYE0 955 aa24.77■■□□□ 1.56
WDR90-224ENST00000552943 MYOM3Q5VTT5 1437 aa24.77■■□□□ 1.56
WDR90-224ENST00000552943 PMFBP1Q8TBY8 1022 aa24.76■■□□□ 1.55
WDR90-224ENST00000552943 CUX1P39880 1505 aa24.76■■□□□ 1.55
WDR90-224ENST00000552943 UACAQ9BZF9 1416 aa24.76■■□□□ 1.55
WDR90-224ENST00000552943 USP47Q96K76 1375 aa24.76■■□□□ 1.55
WDR90-224ENST00000552943 CDK11BP21127 795 aaKnown RBP24.76■■□□□ 1.55
WDR90-224ENST00000552943 PANK3Q9H999 370 aa24.75■■□□□ 1.55
WDR90-224ENST00000552943 TSHZ2Q9NRE2 1034 aa24.75■■□□□ 1.55
WDR90-224ENST00000552943 NUTM2DQ5VT03 806 aaPredicted RBP24.75■■□□□ 1.55
WDR90-224ENST00000552943 PAK3O75914 559 aaPredicted RBP24.73■■□□□ 1.55
WDR90-224ENST00000552943 TRAK1Q9UPV9 953 aa24.73■■□□□ 1.55
WDR90-224ENST00000552943 LRRC9Q6ZRR7 1453 aa24.73■■□□□ 1.55
WDR90-224ENST00000552943 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
WDR90-224ENST00000552943 CENPJQ9HC77 1338 aaPredicted RBP24.71■■□□□ 1.55
WDR90-224ENST00000552943 DNTTIP2Q5QJE6 756 aaKnown RBP24.71■■□□□ 1.55
WDR90-224ENST00000552943 SPRYD3Q8NCJ5 442 aa24.7■■□□□ 1.55
WDR90-224ENST00000552943 APBB1O00213 710 aa24.69■■□□□ 1.54
WDR90-224ENST00000552943 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
WDR90-224ENST00000552943 CASKIN1Q8WXD9 1431 aa24.66■■□□□ 1.54
WDR90-224ENST00000552943 PLCB2Q00722 1185 aa24.66■■□□□ 1.54
WDR90-224ENST00000552943 ZBED9Q6R2W3 1325 aa24.66■■□□□ 1.54
WDR90-224ENST00000552943 NPHP1O15259 732 aa24.65■■□□□ 1.54
WDR90-224ENST00000552943 CHMP4AQ9BY43 222 aa24.65■■□□□ 1.54
WDR90-224ENST00000552943 NAP1L2Q9ULW6 460 aaPredicted RBP24.65■■□□□ 1.54
WDR90-224ENST00000552943 L1TD1Q5T7N2 865 aaKnown RBP24.65■■□□□ 1.54
WDR90-224ENST00000552943 EID1Q9Y6B2 187 aa24.65■■□□□ 1.54
WDR90-224ENST00000552943 DEKP35659 375 aaKnown RBP24.64■■□□□ 1.54
WDR90-224ENST00000552943 LMOD3Q0VAK6 560 aa24.64■■□□□ 1.53
WDR90-224ENST00000552943 STK31Q9BXU1 1019 aa24.64■■□□□ 1.53
WDR90-224ENST00000552943 GOLGA6L4A6NEF3 574 aa24.62■■□□□ 1.53
WDR90-224ENST00000552943 CLUAP1Q96AJ1 413 aa24.62■■□□□ 1.53
WDR90-224ENST00000552943 VGFO15240 615 aaPredicted RBP24.62■■□□□ 1.53
WDR90-224ENST00000552943 RTN4Q9NQC3 1192 aaKnown RBP24.61■■□□□ 1.53
WDR90-224ENST00000552943 FYCO1Q9BQS8 1478 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms