RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
TRAFD1-208ENST00000552890 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
TRAFD1-208ENST00000552890 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
TRAFD1-208ENST00000552890 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.14
TRAFD1-208ENST00000552890 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
TRAFD1-208ENST00000552890 ADGRL1O94910 1474 aa15.94■□□□□ 0.14
TRAFD1-208ENST00000552890 MAGI2Q86UL8 1455 aa15.93■□□□□ 0.14
TRAFD1-208ENST00000552890 PREX2Q70Z35 1606 aa15.92■□□□□ 0.14
TRAFD1-208ENST00000552890 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
TRAFD1-208ENST00000552890 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
TRAFD1-208ENST00000552890 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
TRAFD1-208ENST00000552890 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
TRAFD1-208ENST00000552890 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
TRAFD1-208ENST00000552890 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
TRAFD1-208ENST00000552890 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
TRAFD1-208ENST00000552890 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-208ENST00000552890 CDC42BPAQ5VT25 1732 aa15.87■□□□□ 0.13
TRAFD1-208ENST00000552890 POGZQ7Z3K3 1410 aa15.86■□□□□ 0.13
TRAFD1-208ENST00000552890 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
TRAFD1-208ENST00000552890 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
TRAFD1-208ENST00000552890 CDC42BPBQ9Y5S2 1711 aa15.85■□□□□ 0.13
TRAFD1-208ENST00000552890 ZMYM4Q5VZL5 1548 aa15.84■□□□□ 0.13
TRAFD1-208ENST00000552890 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
TRAFD1-208ENST00000552890 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
TRAFD1-208ENST00000552890 MYOM3Q5VTT5 1437 aa15.83■□□□□ 0.12
TRAFD1-208ENST00000552890 ABCC1P33527 1531 aa15.82■□□□□ 0.12
TRAFD1-208ENST00000552890 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
TRAFD1-208ENST00000552890 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
TRAFD1-208ENST00000552890 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
TRAFD1-208ENST00000552890 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
TRAFD1-208ENST00000552890 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
TRAFD1-208ENST00000552890 KDM5CP41229 1560 aa15.78■□□□□ 0.12
TRAFD1-208ENST00000552890 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
TRAFD1-208ENST00000552890 AFAP1Q8N556 730 aa15.77■□□□□ 0.12
TRAFD1-208ENST00000552890 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.11
TRAFD1-208ENST00000552890 SAMD9LQ8IVG5 1584 aa15.76■□□□□ 0.11
TRAFD1-208ENST00000552890 HNRNPMP52272 730 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRAFD1-208ENST00000552890 ATP10AO60312 1499 aa15.76■□□□□ 0.11
TRAFD1-208ENST00000552890 ARHGEF40Q8TER5 1519 aa15.75■□□□□ 0.11
TRAFD1-208ENST00000552890 FRMPD1Q5SYB0 1578 aa15.75■□□□□ 0.11
TRAFD1-208ENST00000552890 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
TRAFD1-208ENST00000552890 SYCP2Q9BX26 1530 aa15.74■□□□□ 0.11
TRAFD1-208ENST00000552890 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
TRAFD1-208ENST00000552890 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
TRAFD1-208ENST00000552890 CCDC141Q6ZP82 1450 aa15.74■□□□□ 0.11
TRAFD1-208ENST00000552890 C9orf84Q5VXU9 1444 aa15.73■□□□□ 0.11
TRAFD1-208ENST00000552890 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
TRAFD1-208ENST00000552890 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
TRAFD1-208ENST00000552890 ARHGEF5Q12774 1597 aa15.73■□□□□ 0.11
TRAFD1-208ENST00000552890 MBD5Q9P267 1494 aa15.71■□□□□ 0.11
TRAFD1-208ENST00000552890 REREQ9P2R6 1566 aa15.7■□□□□ 0.1
TRAFD1-208ENST00000552890 ARHGEF12Q9NZN5 1544 aa15.7■□□□□ 0.1
TRAFD1-208ENST00000552890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRAFD1-208ENST00000552890 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
TRAFD1-208ENST00000552890 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
TRAFD1-208ENST00000552890 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
TRAFD1-208ENST00000552890 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
TRAFD1-208ENST00000552890 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
TRAFD1-208ENST00000552890 PTPN23Q9H3S7 1636 aa15.67■□□□□ 0.1
TRAFD1-208ENST00000552890 YEATS2Q9ULM3 1422 aa15.66■□□□□ 0.1
TRAFD1-208ENST00000552890 SHANK2Q9UPX8 1470 aa15.65■□□□□ 0.1
TRAFD1-208ENST00000552890 AGLP35573 1532 aa15.65■□□□□ 0.1
TRAFD1-208ENST00000552890 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
TRAFD1-208ENST00000552890 INO80Q9ULG1 1556 aaPredicted RBP15.63■□□□□ 0.09
TRAFD1-208ENST00000552890 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 ANKRD30AQ9BXX3 1397 aa15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 MAST1Q9Y2H9 1570 aa15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 A2MP01023 1474 aa15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
TRAFD1-208ENST00000552890 DAPK1P53355 1430 aa15.6■□□□□ 0.09
TRAFD1-208ENST00000552890 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
TRAFD1-208ENST00000552890 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.09
TRAFD1-208ENST00000552890 ABCA6Q8N139 1617 aa15.58■□□□□ 0.09
TRAFD1-208ENST00000552890 ABCC5O15440 1437 aa15.58■□□□□ 0.08
TRAFD1-208ENST00000552890 FAM135AQ9P2D6 1515 aa15.58■□□□□ 0.08
TRAFD1-208ENST00000552890 BCORL1Q5H9F3 1711 aa15.57■□□□□ 0.08
TRAFD1-208ENST00000552890 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
TRAFD1-208ENST00000552890 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
TRAFD1-208ENST00000552890 PLXNC1O60486 1568 aa15.57■□□□□ 0.08
TRAFD1-208ENST00000552890 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
TRAFD1-208ENST00000552890 DUOX2Q9NRD8 1548 aa15.56■□□□□ 0.08
TRAFD1-208ENST00000552890 ROCK1Q13464 1354 aa15.55■□□□□ 0.08
TRAFD1-208ENST00000552890 ERBINQ96RT1 1412 aa15.54■□□□□ 0.08
TRAFD1-208ENST00000552890 KIF15Q9NS87 1388 aa15.54■□□□□ 0.08
TRAFD1-208ENST00000552890 ADAMTSL3P82987 1691 aa15.54■□□□□ 0.08
TRAFD1-208ENST00000552890 MLECQ14165 292 aa15.53■□□□□ 0.08
TRAFD1-208ENST00000552890 CROCC2H7BZ55 1655 aa15.53■□□□□ 0.08
TRAFD1-208ENST00000552890 ADGRL2O95490 1459 aa15.52■□□□□ 0.08
TRAFD1-208ENST00000552890 KIF3BO15066 747 aa15.52■□□□□ 0.08
TRAFD1-208ENST00000552890 NCOA1Q15788 1441 aa15.51■□□□□ 0.07
TRAFD1-208ENST00000552890 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
TRAFD1-208ENST00000552890 KANK1Q14678 1352 aa15.5■□□□□ 0.07
TRAFD1-208ENST00000552890 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
TRAFD1-208ENST00000552890 GGT6Q6P531 493 aa15.5■□□□□ 0.07
TRAFD1-208ENST00000552890 RRP7BPQ9NSQ0 103 aa15.5■□□□□ 0.07
TRAFD1-208ENST00000552890 PTPRMP28827 1452 aa15.49■□□□□ 0.07
TRAFD1-208ENST00000552890 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
TRAFD1-208ENST00000552890 CHIC2Q9UKJ5 165 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms