RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 ADGRL1O94910 1474 aa15.5■□□□□ 0.07
PFDN5-218ENST00000552742 GPATCH8Q9UKJ3 1502 aaKnown RBP15.49■□□□□ 0.07
PFDN5-218ENST00000552742 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
PFDN5-218ENST00000552742 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
PFDN5-218ENST00000552742 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
PFDN5-218ENST00000552742 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
PFDN5-218ENST00000552742 RICTORQ6R327 1708 aa15.48■□□□□ 0.07
PFDN5-218ENST00000552742 PREX2Q70Z35 1606 aa15.48■□□□□ 0.07
PFDN5-218ENST00000552742 AFAP1Q8N556 730 aa15.47■□□□□ 0.07
PFDN5-218ENST00000552742 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
PFDN5-218ENST00000552742 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
PFDN5-218ENST00000552742 KDM4FA0A1W2PPD8 638 aa15.46■□□□□ 0.07
PFDN5-218ENST00000552742 APLP2Q06481 763 aa15.46■□□□□ 0.07
PFDN5-218ENST00000552742 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.06
PFDN5-218ENST00000552742 MAP3K1Q13233 1512 aa15.44■□□□□ 0.06
PFDN5-218ENST00000552742 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
PFDN5-218ENST00000552742 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
PFDN5-218ENST00000552742 HNRNPMP52272 730 aaKnown RBP eCLIP15.43■□□□□ 0.06
PFDN5-218ENST00000552742 NCOA2Q15596 1464 aa15.43■□□□□ 0.06
PFDN5-218ENST00000552742 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
PFDN5-218ENST00000552742 ARHGEF12Q9NZN5 1544 aa15.43■□□□□ 0.06
PFDN5-218ENST00000552742 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
PFDN5-218ENST00000552742 TRAPPC8Q9Y2L5 1435 aa15.41■□□□□ 0.06
PFDN5-218ENST00000552742 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
PFDN5-218ENST00000552742 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
PFDN5-218ENST00000552742 ABCC1P33527 1531 aa15.39■□□□□ 0.05
PFDN5-218ENST00000552742 ZMYM4Q5VZL5 1548 aa15.39■□□□□ 0.05
PFDN5-218ENST00000552742 YEATS2Q9ULM3 1422 aa15.39■□□□□ 0.05
PFDN5-218ENST00000552742 ZNF518AQ6AHZ1 1483 aa15.39■□□□□ 0.05
PFDN5-218ENST00000552742 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
PFDN5-218ENST00000552742 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
PFDN5-218ENST00000552742 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
PFDN5-218ENST00000552742 ZFYVE16Q7Z3T8 1539 aa15.37■□□□□ 0.05
PFDN5-218ENST00000552742 KIAA1107Q9UPP5 1409 aa15.35■□□□□ 0.05
PFDN5-218ENST00000552742 ARHGEF40Q8TER5 1519 aa15.35■□□□□ 0.05
PFDN5-218ENST00000552742 SYCP2Q9BX26 1530 aa15.35■□□□□ 0.05
PFDN5-218ENST00000552742 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
PFDN5-218ENST00000552742 KDM5CP41229 1560 aa15.34■□□□□ 0.05
PFDN5-218ENST00000552742 ATP10AO60312 1499 aa15.33■□□□□ 0.05
PFDN5-218ENST00000552742 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
PFDN5-218ENST00000552742 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.04
PFDN5-218ENST00000552742 SIGLEC1Q9BZZ2 1709 aa15.31■□□□□ 0.04
PFDN5-218ENST00000552742 HECW2Q9P2P5 1572 aa15.31■□□□□ 0.04
PFDN5-218ENST00000552742 MLECQ14165 292 aa15.3■□□□□ 0.04
PFDN5-218ENST00000552742 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
PFDN5-218ENST00000552742 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
PFDN5-218ENST00000552742 KIDINS220Q9ULH0 1771 aa15.3■□□□□ 0.04
PFDN5-218ENST00000552742 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
PFDN5-218ENST00000552742 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
PFDN5-218ENST00000552742 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
PFDN5-218ENST00000552742 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
PFDN5-218ENST00000552742 C9orf84Q5VXU9 1444 aa15.27■□□□□ 0.04
PFDN5-218ENST00000552742 BCORL1Q5H9F3 1711 aa15.27■□□□□ 0.04
PFDN5-218ENST00000552742 ADAMTSL3P82987 1691 aa15.26■□□□□ 0.03
PFDN5-218ENST00000552742 RSPH4AQ5TD94 716 aa15.26■□□□□ 0.03
PFDN5-218ENST00000552742 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
PFDN5-218ENST00000552742 ATP7AQ04656 1500 aa15.24■□□□□ 0.03
PFDN5-218ENST00000552742 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
PFDN5-218ENST00000552742 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
PFDN5-218ENST00000552742 CCDC141Q6ZP82 1450 aa15.22■□□□□ 0.03
PFDN5-218ENST00000552742 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
PFDN5-218ENST00000552742 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
PFDN5-218ENST00000552742 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
PFDN5-218ENST00000552742 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
PFDN5-218ENST00000552742 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
PFDN5-218ENST00000552742 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
PFDN5-218ENST00000552742 RTEL1-TNFRSF6BF6WH68 1400 aa15.2■□□□□ 0.02
PFDN5-218ENST00000552742 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
PFDN5-218ENST00000552742 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
PFDN5-218ENST00000552742 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
PFDN5-218ENST00000552742 A2MP01023 1474 aa15.18■□□□□ 0.02
PFDN5-218ENST00000552742 PTPRMP28827 1452 aa15.18■□□□□ 0.02
PFDN5-218ENST00000552742 AGLP35573 1532 aa15.17■□□□□ 0.02
PFDN5-218ENST00000552742 ADGBQ8N7X0 1667 aa15.17■□□□□ 0.02
PFDN5-218ENST00000552742 FER1L4A9Z1Z3 1794 aa15.16■□□□□ 0.02
PFDN5-218ENST00000552742 TCOF1Q13428 1488 aaKnown RBP15.15■□□□□ 0.02
PFDN5-218ENST00000552742 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
PFDN5-218ENST00000552742 ABCC5O15440 1437 aa15.15■□□□□ 0.02
PFDN5-218ENST00000552742 CEBPAP49715 358 aaPredicted RBP15.14■□□□□ 0.01
PFDN5-218ENST00000552742 GGT6Q6P531 493 aa15.14■□□□□ 0.01
PFDN5-218ENST00000552742 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
PFDN5-218ENST00000552742 PLXNC1O60486 1568 aa15.13■□□□□ 0.01
PFDN5-218ENST00000552742 ESF1Q9H501 851 aaKnown RBP15.13■□□□□ 0.01
PFDN5-218ENST00000552742 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
PFDN5-218ENST00000552742 KIF3BO15066 747 aa15.12■□□□□ 0.01
PFDN5-218ENST00000552742 DAPK1P53355 1430 aa15.11■□□□□ 0.01
PFDN5-218ENST00000552742 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
PFDN5-218ENST00000552742 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
PFDN5-218ENST00000552742 CROCC2H7BZ55 1655 aa15.09■□□□□ 0.01
PFDN5-218ENST00000552742 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
PFDN5-218ENST00000552742 ITGAEP38570 1179 aa15.06■□□□□ 0
PFDN5-218ENST00000552742 PPP6R1Q9UPN7 881 aa15.06■□□□□ 0
PFDN5-218ENST00000552742 SETD1BQ9UPS6 1966 aaKnown RBP15.05■□□□□ 0
PFDN5-218ENST00000552742 KIF15Q9NS87 1388 aa15.05■□□□□ -0
PFDN5-218ENST00000552742 C3P01024 1663 aa15.05■□□□□ -0
PFDN5-218ENST00000552742 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ -0
PFDN5-218ENST00000552742 PTPRKQ15262 1439 aa15.04■□□□□ -0
PFDN5-218ENST00000552742 NCOA1Q15788 1441 aa15.04■□□□□ -0
PFDN5-218ENST00000552742 CNTLNQ9NXG0 1405 aa15.04■□□□□ -0
PFDN5-218ENST00000552742 ZMYM3Q14202 1370 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms