RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
CCDC59-207ENST00000552606 ATP1B4Q9UN42 357 aaPredicted RBP14.55□□□□□ -0.08
CCDC59-207ENST00000552606 TEX14Q8IWB6 1497 aa14.55□□□□□ -0.08
CCDC59-207ENST00000552606 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
CCDC59-207ENST00000552606 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
CCDC59-207ENST00000552606 CD109Q6YHK3 1445 aa14.54□□□□□ -0.08
CCDC59-207ENST00000552606 KDM6BO15054 1643 aa14.52□□□□□ -0.08
CCDC59-207ENST00000552606 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
CCDC59-207ENST00000552606 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
CCDC59-207ENST00000552606 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
CCDC59-207ENST00000552606 RICTORQ6R327 1708 aa14.49□□□□□ -0.09
CCDC59-207ENST00000552606 FRMPD1Q5SYB0 1578 aa14.49□□□□□ -0.09
CCDC59-207ENST00000552606 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
CCDC59-207ENST00000552606 NEO1Q92859 1461 aa14.49□□□□□ -0.09
CCDC59-207ENST00000552606 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
CCDC59-207ENST00000552606 PLCH2O75038 1416 aa14.47□□□□□ -0.09
CCDC59-207ENST00000552606 FANCAO15360 1455 aa14.46□□□□□ -0.09
CCDC59-207ENST00000552606 NCOA2Q15596 1464 aa14.46□□□□□ -0.09
CCDC59-207ENST00000552606 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.09
CCDC59-207ENST00000552606 COL17A1Q9UMD9 1497 aaPredicted RBP14.45□□□□□ -0.1
CCDC59-207ENST00000552606 ABCC1P33527 1531 aa14.45□□□□□ -0.1
CCDC59-207ENST00000552606 ARHGAP5Q13017 1502 aa14.45□□□□□ -0.1
CCDC59-207ENST00000552606 GPATCH8Q9UKJ3 1502 aaKnown RBP14.45□□□□□ -0.1
CCDC59-207ENST00000552606 KANK4Q5T7N3 995 aaPredicted RBP14.41□□□□□ -0.1
CCDC59-207ENST00000552606 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
CCDC59-207ENST00000552606 ZMYM4Q5VZL5 1548 aa14.41□□□□□ -0.1
CCDC59-207ENST00000552606 PHLDB1Q86UU1 1377 aa14.4□□□□□ -0.1
CCDC59-207ENST00000552606 AKNAQ7Z591 1439 aa14.4□□□□□ -0.1
CCDC59-207ENST00000552606 KDM5CP41229 1560 aa14.39□□□□□ -0.11
CCDC59-207ENST00000552606 ADGRL1O94910 1474 aa14.39□□□□□ -0.11
CCDC59-207ENST00000552606 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
CCDC59-207ENST00000552606 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
CCDC59-207ENST00000552606 SYCP2Q9BX26 1530 aa14.37□□□□□ -0.11
CCDC59-207ENST00000552606 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
CCDC59-207ENST00000552606 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
CCDC59-207ENST00000552606 CROCC2H7BZ55 1655 aa14.36□□□□□ -0.11
CCDC59-207ENST00000552606 ARHGEF40Q8TER5 1519 aa14.36□□□□□ -0.11
CCDC59-207ENST00000552606 MYOM3Q5VTT5 1437 aa14.35□□□□□ -0.11
CCDC59-207ENST00000552606 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
CCDC59-207ENST00000552606 PTPN23Q9H3S7 1636 aa14.34□□□□□ -0.11
CCDC59-207ENST00000552606 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
CCDC59-207ENST00000552606 CAMSAP2Q08AD1 1489 aa14.34□□□□□ -0.11
CCDC59-207ENST00000552606 INO80Q9ULG1 1556 aaPredicted RBP14.34□□□□□ -0.11
CCDC59-207ENST00000552606 PLEKHH2Q8IVE3 1493 aa14.32□□□□□ -0.12
CCDC59-207ENST00000552606 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
CCDC59-207ENST00000552606 ARHGEF5Q12774 1597 aa14.32□□□□□ -0.12
CCDC59-207ENST00000552606 APLP2Q06481 763 aa14.32□□□□□ -0.12
CCDC59-207ENST00000552606 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
CCDC59-207ENST00000552606 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
CCDC59-207ENST00000552606 ZNF518AQ6AHZ1 1483 aa14.31□□□□□ -0.12
CCDC59-207ENST00000552606 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
CCDC59-207ENST00000552606 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
CCDC59-207ENST00000552606 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
CCDC59-207ENST00000552606 ABCA6Q8N139 1617 aa14.3□□□□□ -0.12
CCDC59-207ENST00000552606 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
CCDC59-207ENST00000552606 FGD6Q6ZV73 1430 aa14.29□□□□□ -0.12
CCDC59-207ENST00000552606 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
CCDC59-207ENST00000552606 MBD5Q9P267 1494 aa14.29□□□□□ -0.12
CCDC59-207ENST00000552606 ZFYVE16Q7Z3T8 1539 aa14.29□□□□□ -0.12
CCDC59-207ENST00000552606 ADGBQ8N7X0 1667 aa14.29□□□□□ -0.12
CCDC59-207ENST00000552606 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
CCDC59-207ENST00000552606 DIP2CQ9Y2E4 1556 aa14.28□□□□□ -0.12
CCDC59-207ENST00000552606 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.13
CCDC59-207ENST00000552606 MAST1Q9Y2H9 1570 aa14.26□□□□□ -0.13
CCDC59-207ENST00000552606 MAGI2Q86UL8 1455 aa14.26□□□□□ -0.13
CCDC59-207ENST00000552606 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
CCDC59-207ENST00000552606 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
CCDC59-207ENST00000552606 REREQ9P2R6 1566 aa14.26□□□□□ -0.13
CCDC59-207ENST00000552606 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
CCDC59-207ENST00000552606 RAPGEF3O95398 923 aa14.25□□□□□ -0.13
CCDC59-207ENST00000552606 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
CCDC59-207ENST00000552606 MLH3Q9UHC1 1453 aa14.25□□□□□ -0.13
CCDC59-207ENST00000552606 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
CCDC59-207ENST00000552606 ZNF644Q9H582 1327 aaPredicted RBP14.23□□□□□ -0.13
CCDC59-207ENST00000552606 PLXNC1O60486 1568 aa14.22□□□□□ -0.13
CCDC59-207ENST00000552606 SHANK2Q9UPX8 1470 aa14.21□□□□□ -0.13
CCDC59-207ENST00000552606 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.13
CCDC59-207ENST00000552606 BCORL1Q5H9F3 1711 aa14.2□□□□□ -0.14
CCDC59-207ENST00000552606 RRBP1Q9P2E9 1410 aaKnown RBP14.18□□□□□ -0.14
CCDC59-207ENST00000552606 DAPK1P53355 1430 aa14.17□□□□□ -0.14
CCDC59-207ENST00000552606 C9orf84Q5VXU9 1444 aa14.17□□□□□ -0.14
CCDC59-207ENST00000552606 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC59-207ENST00000552606 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
CCDC59-207ENST00000552606 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
CCDC59-207ENST00000552606 ADAMTSL3P82987 1691 aa14.16□□□□□ -0.14
CCDC59-207ENST00000552606 ABCC5O15440 1437 aa14.15□□□□□ -0.14
CCDC59-207ENST00000552606 ATP10AO60312 1499 aa14.15□□□□□ -0.14
CCDC59-207ENST00000552606 PPARGC1BQ86YN6 1023 aaKnown RBP14.15□□□□□ -0.14
CCDC59-207ENST00000552606 AGLP35573 1532 aa14.15□□□□□ -0.14
CCDC59-207ENST00000552606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC59-207ENST00000552606 EIF2AK4Q9P2K8 1649 aaKnown RBP14.14□□□□□ -0.15
CCDC59-207ENST00000552606 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
CCDC59-207ENST00000552606 ADGRL2O95490 1459 aa14.12□□□□□ -0.15
CCDC59-207ENST00000552606 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
CCDC59-207ENST00000552606 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
CCDC59-207ENST00000552606 RNF17Q9BXT8 1623 aaKnown RBP14.11□□□□□ -0.15
CCDC59-207ENST00000552606 RSPH4AQ5TD94 716 aa14.1□□□□□ -0.15
CCDC59-207ENST00000552606 A2MP01023 1474 aa14.1□□□□□ -0.15
CCDC59-207ENST00000552606 GCC2Q8IWJ2 1684 aa14.1□□□□□ -0.15
CCDC59-207ENST00000552606 PTPRKQ15262 1439 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms