RNA–Protein interactions for RNA: ENST00000552501.1

PCNPP1-201, Transcript of PEST containing nuclear protein pseudogene 1, humanhuman

BASIC

Gene PCNPP1, Length 511 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP1-201ENST00000552501 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
PCNPP1-201ENST00000552501 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
PCNPP1-201ENST00000552501 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
PCNPP1-201ENST00000552501 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
PCNPP1-201ENST00000552501 ERBB3P21860 1342 aa11.86□□□□□ -0.51
PCNPP1-201ENST00000552501 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
PCNPP1-201ENST00000552501 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
PCNPP1-201ENST00000552501 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
PCNPP1-201ENST00000552501 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
PCNPP1-201ENST00000552501 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
PCNPP1-201ENST00000552501 C2orf72A6NCS6 295 aa11.74□□□□□ -0.53
PCNPP1-201ENST00000552501 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
PCNPP1-201ENST00000552501 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
PCNPP1-201ENST00000552501 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
PCNPP1-201ENST00000552501 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
PCNPP1-201ENST00000552501 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
PCNPP1-201ENST00000552501 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
PCNPP1-201ENST00000552501 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
PCNPP1-201ENST00000552501 KIF3CO14782 793 aa11.7□□□□□ -0.54
PCNPP1-201ENST00000552501 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
PCNPP1-201ENST00000552501 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
PCNPP1-201ENST00000552501 PPP1R37O75864 691 aa11.66□□□□□ -0.54
PCNPP1-201ENST00000552501 SLC34A2O95436 690 aa11.65□□□□□ -0.54
PCNPP1-201ENST00000552501 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
PCNPP1-201ENST00000552501 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
PCNPP1-201ENST00000552501 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
PCNPP1-201ENST00000552501 NUDT7P0C024 238 aa11.59□□□□□ -0.55
PCNPP1-201ENST00000552501 PTGER2P43116 358 aa11.58□□□□□ -0.56
PCNPP1-201ENST00000552501 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.56
PCNPP1-201ENST00000552501 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
PCNPP1-201ENST00000552501 FOXK1P85037 733 aa11.57□□□□□ -0.56
PCNPP1-201ENST00000552501 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
PCNPP1-201ENST00000552501 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
PCNPP1-201ENST00000552501 ABCC9O60706 1549 aa11.55□□□□□ -0.56
PCNPP1-201ENST00000552501 TBC1D12O60347 775 aa11.55□□□□□ -0.56
PCNPP1-201ENST00000552501 PBX2P40425 430 aa11.55□□□□□ -0.56
PCNPP1-201ENST00000552501 PLPP6Q8IY26 295 aa11.54□□□□□ -0.56
PCNPP1-201ENST00000552501 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
PCNPP1-201ENST00000552501 LHX6Q9UPM6 363 aa11.52□□□□□ -0.57
PCNPP1-201ENST00000552501 CCDC180Q9P1Z9 1646 aa11.52□□□□□ -0.57
PCNPP1-201ENST00000552501 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
PCNPP1-201ENST00000552501 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
PCNPP1-201ENST00000552501 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
PCNPP1-201ENST00000552501 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
PCNPP1-201ENST00000552501 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
PCNPP1-201ENST00000552501 DSG2Q14126 1118 aa11.47□□□□□ -0.57
PCNPP1-201ENST00000552501 PDE4AP27815 886 aa11.45□□□□□ -0.58
PCNPP1-201ENST00000552501 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
PCNPP1-201ENST00000552501 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
PCNPP1-201ENST00000552501 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
PCNPP1-201ENST00000552501 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
PCNPP1-201ENST00000552501 ARHGAP33O14559 1287 aa11.4□□□□□ -0.58
PCNPP1-201ENST00000552501 GTPBP6O43824 516 aaPredicted RBP11.39□□□□□ -0.59
PCNPP1-201ENST00000552501 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCNPP1-201ENST00000552501 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
PCNPP1-201ENST00000552501 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
PCNPP1-201ENST00000552501 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
PCNPP1-201ENST00000552501 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
PCNPP1-201ENST00000552501 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
PCNPP1-201ENST00000552501 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
PCNPP1-201ENST00000552501 TK2O00142 265 aa11.32□□□□□ -0.6
PCNPP1-201ENST00000552501 ADGRD1Q6QNK2 874 aa11.32□□□□□ -0.6
PCNPP1-201ENST00000552501 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
PCNPP1-201ENST00000552501 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
PCNPP1-201ENST00000552501 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
PCNPP1-201ENST00000552501 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
PCNPP1-201ENST00000552501 KCNK17Q96T54 332 aa11.27□□□□□ -0.61
PCNPP1-201ENST00000552501 PSEN2P49810 448 aa11.26□□□□□ -0.61
PCNPP1-201ENST00000552501 MFSD10Q14728 455 aa11.25□□□□□ -0.61
PCNPP1-201ENST00000552501 EVI5O60447 810 aa11.24□□□□□ -0.61
PCNPP1-201ENST00000552501 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
PCNPP1-201ENST00000552501 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
PCNPP1-201ENST00000552501 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
PCNPP1-201ENST00000552501 PTPREP23469 700 aa11.22□□□□□ -0.61
PCNPP1-201ENST00000552501 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
PCNPP1-201ENST00000552501 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
PCNPP1-201ENST00000552501 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
PCNPP1-201ENST00000552501 FOSBP53539 338 aa11.21□□□□□ -0.61
PCNPP1-201ENST00000552501 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
PCNPP1-201ENST00000552501 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
PCNPP1-201ENST00000552501 ZDHHC16Q969W1 377 aa11.19□□□□□ -0.62
PCNPP1-201ENST00000552501 HRO43593 1189 aa11.17□□□□□ -0.62
PCNPP1-201ENST00000552501 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
PCNPP1-201ENST00000552501 VPS9D1Q9Y2B5 631 aa11.15□□□□□ -0.62
PCNPP1-201ENST00000552501 GOLGA8CPA6NN73 597 aa11.13□□□□□ -0.63
PCNPP1-201ENST00000552501 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
PCNPP1-201ENST00000552501 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
PCNPP1-201ENST00000552501 KCTD12Q96CX2 325 aaKnown RBP11.13□□□□□ -0.63
PCNPP1-201ENST00000552501 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
PCNPP1-201ENST00000552501 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
PCNPP1-201ENST00000552501 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
PCNPP1-201ENST00000552501 PHF14O94880 888 aa11.09□□□□□ -0.63
PCNPP1-201ENST00000552501 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
PCNPP1-201ENST00000552501 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
PCNPP1-201ENST00000552501 CAMK2BQ13554 666 aa11.08□□□□□ -0.64
PCNPP1-201ENST00000552501 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
PCNPP1-201ENST00000552501 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
PCNPP1-201ENST00000552501 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
PCNPP1-201ENST00000552501 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
PCNPP1-201ENST00000552501 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms