RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 HS6ST3Q8IZP7 471 aa12.29□□□□□ -0.44
PRIM1-207ENST00000552408 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
PRIM1-207ENST00000552408 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
PRIM1-207ENST00000552408 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
PRIM1-207ENST00000552408 HS3ST6Q96QI5 342 aa12.25□□□□□ -0.45
PRIM1-207ENST00000552408 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
PRIM1-207ENST00000552408 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
PRIM1-207ENST00000552408 HOXB1P14653 301 aaPredicted RBP12.22□□□□□ -0.45
PRIM1-207ENST00000552408 KIF3CO14782 793 aa12.2□□□□□ -0.46
PRIM1-207ENST00000552408 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRIM1-207ENST00000552408 GPR153Q6NV75 609 aa12.17□□□□□ -0.46
PRIM1-207ENST00000552408 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
PRIM1-207ENST00000552408 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
PRIM1-207ENST00000552408 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
PRIM1-207ENST00000552408 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
PRIM1-207ENST00000552408 ERBB3P21860 1342 aa12.13□□□□□ -0.47
PRIM1-207ENST00000552408 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
PRIM1-207ENST00000552408 VARS2Q5ST30 1063 aaKnown RBP12.11□□□□□ -0.47
PRIM1-207ENST00000552408 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
PRIM1-207ENST00000552408 SPNS2Q8IVW8 549 aa12.09□□□□□ -0.47
PRIM1-207ENST00000552408 ZSWIM6Q9HCJ5 1215 aa12.09□□□□□ -0.47
PRIM1-207ENST00000552408 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
PRIM1-207ENST00000552408 NUDT7P0C024 238 aa12.03□□□□□ -0.48
PRIM1-207ENST00000552408 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
PRIM1-207ENST00000552408 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.49
PRIM1-207ENST00000552408 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
PRIM1-207ENST00000552408 DSG2Q14126 1118 aa12□□□□□ -0.49
PRIM1-207ENST00000552408 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
PRIM1-207ENST00000552408 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
PRIM1-207ENST00000552408 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
PRIM1-207ENST00000552408 SLC34A2O95436 690 aa11.97□□□□□ -0.49
PRIM1-207ENST00000552408 FOXK1P85037 733 aa11.96□□□□□ -0.49
PRIM1-207ENST00000552408 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
PRIM1-207ENST00000552408 LHX6Q9UPM6 363 aa11.96□□□□□ -0.49
PRIM1-207ENST00000552408 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
PRIM1-207ENST00000552408 CRISPLD2Q9H0B8 497 aa11.91□□□□□ -0.5
PRIM1-207ENST00000552408 POTEEQ6S8J3 1075 aa11.9□□□□□ -0.5
PRIM1-207ENST00000552408 RYDENQ9NUL5 291 aaKnown RBP11.9□□□□□ -0.5
PRIM1-207ENST00000552408 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
PRIM1-207ENST00000552408 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
PRIM1-207ENST00000552408 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
PRIM1-207ENST00000552408 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRIM1-207ENST00000552408 CADPS2Q86UW7 1296 aa11.87□□□□□ -0.51
PRIM1-207ENST00000552408 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
PRIM1-207ENST00000552408 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
PRIM1-207ENST00000552408 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
PRIM1-207ENST00000552408 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
PRIM1-207ENST00000552408 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
PRIM1-207ENST00000552408 PDE4AP27815 886 aa11.79□□□□□ -0.52
PRIM1-207ENST00000552408 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRIM1-207ENST00000552408 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
PRIM1-207ENST00000552408 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
PRIM1-207ENST00000552408 TBC1D12O60347 775 aa11.74□□□□□ -0.53
PRIM1-207ENST00000552408 PSEN2P49810 448 aa11.74□□□□□ -0.53
PRIM1-207ENST00000552408 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
PRIM1-207ENST00000552408 MYT1LQ9UL68 1186 aa11.74□□□□□ -0.53
PRIM1-207ENST00000552408 MFSD10Q14728 455 aa11.73□□□□□ -0.53
PRIM1-207ENST00000552408 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
PRIM1-207ENST00000552408 DMRTA1Q5VZB9 504 aa11.72□□□□□ -0.53
PRIM1-207ENST00000552408 EMILIN3Q9NT22 766 aa11.72□□□□□ -0.53
PRIM1-207ENST00000552408 PBX2P40425 430 aa11.71□□□□□ -0.53
PRIM1-207ENST00000552408 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
PRIM1-207ENST00000552408 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
PRIM1-207ENST00000552408 ZNF454Q8N9F8 522 aa11.68□□□□□ -0.54
PRIM1-207ENST00000552408 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
PRIM1-207ENST00000552408 EVI5O60447 810 aa11.66□□□□□ -0.54
PRIM1-207ENST00000552408 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
PRIM1-207ENST00000552408 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
PRIM1-207ENST00000552408 FOSBP53539 338 aa11.62□□□□□ -0.55
PRIM1-207ENST00000552408 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
PRIM1-207ENST00000552408 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
PRIM1-207ENST00000552408 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
PRIM1-207ENST00000552408 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
PRIM1-207ENST00000552408 ANO8Q9HCE9 1232 aaPredicted RBP11.61□□□□□ -0.55
PRIM1-207ENST00000552408 PTGER2P43116 358 aa11.59□□□□□ -0.55
PRIM1-207ENST00000552408 HRO43593 1189 aa11.57□□□□□ -0.56
PRIM1-207ENST00000552408 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
PRIM1-207ENST00000552408 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
PRIM1-207ENST00000552408 DPYSL4O14531 572 aa11.56□□□□□ -0.56
PRIM1-207ENST00000552408 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
PRIM1-207ENST00000552408 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
PRIM1-207ENST00000552408 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
PRIM1-207ENST00000552408 TK2O00142 265 aa11.53□□□□□ -0.56
PRIM1-207ENST00000552408 PCDHGA10Q9Y5H3 936 aa11.53□□□□□ -0.56
PRIM1-207ENST00000552408 ZDHHC16Q969W1 377 aa11.52□□□□□ -0.57
PRIM1-207ENST00000552408 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.57
PRIM1-207ENST00000552408 PTPREP23469 700 aa11.49□□□□□ -0.57
PRIM1-207ENST00000552408 KCNH8Q96L42 1107 aa11.48□□□□□ -0.57
PRIM1-207ENST00000552408 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
PRIM1-207ENST00000552408 COL9A1P20849 921 aa11.46□□□□□ -0.57
PRIM1-207ENST00000552408 KCTD12Q96CX2 325 aaKnown RBP11.46□□□□□ -0.57
PRIM1-207ENST00000552408 DDX12PQ92771 950 aa11.44□□□□□ -0.58
PRIM1-207ENST00000552408 PROX2Q3B8N5 592 aa11.43□□□□□ -0.58
PRIM1-207ENST00000552408 PHF14O94880 888 aa11.42□□□□□ -0.58
PRIM1-207ENST00000552408 TYW1BQ6NUM6 668 aa11.42□□□□□ -0.58
PRIM1-207ENST00000552408 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
PRIM1-207ENST00000552408 BHMG1C9JSJ3 638 aaPredicted RBP11.41□□□□□ -0.58
PRIM1-207ENST00000552408 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
PRIM1-207ENST00000552408 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
PRIM1-207ENST00000552408 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 689 ms