RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 SCAPERQ9BY12 1400 aa30.86■■■□□ 2.53
GPN3-210ENST00000552180 ARHGAP5Q13017 1502 aa30.86■■■□□ 2.53
GPN3-210ENST00000552180 PREX2Q70Z35 1606 aa30.84■■■□□ 2.53
GPN3-210ENST00000552180 CDC42BPAQ5VT25 1732 aa30.82■■■□□ 2.52
GPN3-210ENST00000552180 GPATCH8Q9UKJ3 1502 aaKnown RBP30.8■■■□□ 2.52
GPN3-210ENST00000552180 EHBP1L1Q8N3D4 1523 aa30.79■■■□□ 2.52
GPN3-210ENST00000552180 AEBP2Q6ZN18 517 aaPredicted RBP30.79■■■□□ 2.52
GPN3-210ENST00000552180 POGZQ7Z3K3 1410 aa30.79■■■□□ 2.52
GPN3-210ENST00000552180 TIAM1Q13009 1591 aa30.78■■■□□ 2.52
GPN3-210ENST00000552180 ZMYM4Q5VZL5 1548 aa30.77■■■□□ 2.52
GPN3-210ENST00000552180 CCNB3Q8WWL7 1395 aa30.73■■■□□ 2.51
GPN3-210ENST00000552180 MAP3K1Q13233 1512 aa30.72■■■□□ 2.51
GPN3-210ENST00000552180 MAGI2Q86UL8 1455 aa30.71■■■□□ 2.51
GPN3-210ENST00000552180 ARHGEF12Q9NZN5 1544 aa30.71■■■□□ 2.51
GPN3-210ENST00000552180 AFAP1Q8N556 730 aa30.7■■■□□ 2.51
GPN3-210ENST00000552180 ABCC1P33527 1531 aa30.69■■■□□ 2.5
GPN3-210ENST00000552180 ARHGEF40Q8TER5 1519 aa30.68■■■□□ 2.5
GPN3-210ENST00000552180 YEATS2Q9ULM3 1422 aa30.68■■■□□ 2.5
GPN3-210ENST00000552180 ZNF518AQ6AHZ1 1483 aa30.68■■■□□ 2.5
GPN3-210ENST00000552180 LRRC9Q6ZRR7 1453 aa30.68■■■□□ 2.5
GPN3-210ENST00000552180 CFDP1Q9UEE9 299 aaPredicted RBP30.67■■■□□ 2.5
GPN3-210ENST00000552180 SAMD9LQ8IVG5 1584 aa30.66■■■□□ 2.5
GPN3-210ENST00000552180 TRAPPC8Q9Y2L5 1435 aa30.65■■■□□ 2.5
GPN3-210ENST00000552180 ZFYVE16Q7Z3T8 1539 aa30.65■■■□□ 2.5
GPN3-210ENST00000552180 KANK4Q5T7N3 995 aaPredicted RBP30.65■■■□□ 2.5
GPN3-210ENST00000552180 ZNF777Q9ULD5 760 aaPredicted RBP30.65■■■□□ 2.5
GPN3-210ENST00000552180 KDM5CP41229 1560 aa30.65■■■□□ 2.5
GPN3-210ENST00000552180 NCOA2Q15596 1464 aa30.64■■■□□ 2.5
GPN3-210ENST00000552180 ITSN2Q9NZM3 1697 aa30.62■■■□□ 2.49
GPN3-210ENST00000552180 SUPT6HQ7KZ85 1726 aaKnown RBP30.62■■■□□ 2.49
GPN3-210ENST00000552180 KIAA1107Q9UPP5 1409 aa30.59■■■□□ 2.49
GPN3-210ENST00000552180 HNRNPMP52272 730 aaKnown RBP eCLIP30.57■■■□□ 2.48
GPN3-210ENST00000552180 MLH3Q9UHC1 1453 aa30.57■■■□□ 2.48
GPN3-210ENST00000552180 ZNF644Q9H582 1327 aaPredicted RBP30.56■■■□□ 2.48
GPN3-210ENST00000552180 PLEKHH2Q8IVE3 1493 aa30.56■■■□□ 2.48
GPN3-210ENST00000552180 SYCP2Q9BX26 1530 aa30.55■■■□□ 2.48
GPN3-210ENST00000552180 ATP10AO60312 1499 aa30.55■■■□□ 2.48
GPN3-210ENST00000552180 SIGLEC1Q9BZZ2 1709 aa30.53■■■□□ 2.48
GPN3-210ENST00000552180 HECW2Q9P2P5 1572 aa30.53■■■□□ 2.48
GPN3-210ENST00000552180 ARID4BQ4LE39 1312 aaPredicted RBP30.52■■■□□ 2.48
GPN3-210ENST00000552180 ADAMTSL3P82987 1691 aa30.5■■■□□ 2.47
GPN3-210ENST00000552180 APLP2Q06481 763 aa30.5■■■□□ 2.47
GPN3-210ENST00000552180 BCORL1Q5H9F3 1711 aa30.5■■■□□ 2.47
GPN3-210ENST00000552180 MBD5Q9P267 1494 aa30.48■■■□□ 2.47
GPN3-210ENST00000552180 C9orf84Q5VXU9 1444 aa30.47■■■□□ 2.47
GPN3-210ENST00000552180 DIP2CQ9Y2E4 1556 aa30.46■■■□□ 2.47
GPN3-210ENST00000552180 MYT1LQ9UL68 1186 aa30.46■■■□□ 2.47
GPN3-210ENST00000552180 KIDINS220Q9ULH0 1771 aa30.46■■■□□ 2.47
GPN3-210ENST00000552180 ABCA6Q8N139 1617 aa30.44■■■□□ 2.46
GPN3-210ENST00000552180 SPAG9O60271 1321 aaKnown RBP30.44■■■□□ 2.46
GPN3-210ENST00000552180 REREQ9P2R6 1566 aa30.41■■■□□ 2.46
GPN3-210ENST00000552180 CAMSAP2Q08AD1 1489 aa30.4■■■□□ 2.46
GPN3-210ENST00000552180 MYOM3Q5VTT5 1437 aa30.38■■■□□ 2.45
GPN3-210ENST00000552180 MADDQ8WXG6 1647 aa30.36■■■□□ 2.45
GPN3-210ENST00000552180 INO80Q9ULG1 1556 aaPredicted RBP30.36■■■□□ 2.45
GPN3-210ENST00000552180 MIA2Q96PC5 1412 aa30.35■■■□□ 2.45
GPN3-210ENST00000552180 ATP7AQ04656 1500 aa30.35■■■□□ 2.45
GPN3-210ENST00000552180 PTPRMP28827 1452 aa30.34■■■□□ 2.45
GPN3-210ENST00000552180 MLECQ14165 292 aa30.33■■■□□ 2.45
GPN3-210ENST00000552180 RSPH4AQ5TD94 716 aa30.33■■■□□ 2.45
GPN3-210ENST00000552180 AGLP35573 1532 aa30.32■■■□□ 2.44
GPN3-210ENST00000552180 RTEL1-TNFRSF6BF6WH68 1400 aa30.3■■■□□ 2.44
GPN3-210ENST00000552180 CCDC141Q6ZP82 1450 aa30.3■■■□□ 2.44
GPN3-210ENST00000552180 ARHGEF5Q12774 1597 aa30.29■■■□□ 2.44
GPN3-210ENST00000552180 RIMS1Q86UR5 1692 aaKnown RBP30.25■■■□□ 2.43
GPN3-210ENST00000552180 A2MP01023 1474 aa30.23■■■□□ 2.43
GPN3-210ENST00000552180 PLXNC1O60486 1568 aa30.21■■■□□ 2.43
GPN3-210ENST00000552180 FER1L4A9Z1Z3 1794 aa30.2■■■□□ 2.43
GPN3-210ENST00000552180 FGD6Q6ZV73 1430 aa30.2■■■□□ 2.42
GPN3-210ENST00000552180 TSPY4P0CV99 314 aa30.19■■■□□ 2.42
GPN3-210ENST00000552180 TSPY10P0CW01 314 aa30.19■■■□□ 2.42
GPN3-210ENST00000552180 ADGBQ8N7X0 1667 aa30.18■■■□□ 2.42
GPN3-210ENST00000552180 PTPN23Q9H3S7 1636 aa30.17■■■□□ 2.42
GPN3-210ENST00000552180 TCOF1Q13428 1488 aaKnown RBP30.16■■■□□ 2.42
GPN3-210ENST00000552180 DHX29Q7Z478 1369 aaKnown RBP30.15■■■□□ 2.42
GPN3-210ENST00000552180 MAST1Q9Y2H9 1570 aa30.13■■■□□ 2.41
GPN3-210ENST00000552180 ABCC5O15440 1437 aa30.1■■■□□ 2.41
GPN3-210ENST00000552180 CEBPAP49715 358 aaPredicted RBP30.07■■■□□ 2.4
GPN3-210ENST00000552180 PLPPR3Q6T4P5 718 aa30.06■■■□□ 2.4
GPN3-210ENST00000552180 GGT6Q6P531 493 aa30.03■■■□□ 2.4
GPN3-210ENST00000552180 PPARGC1BQ86YN6 1023 aaKnown RBP30.03■■■□□ 2.4
GPN3-210ENST00000552180 DAPK1P53355 1430 aa30.03■■■□□ 2.4
GPN3-210ENST00000552180 DNMT1P26358 1616 aaKnown RBP30.03■■■□□ 2.4
GPN3-210ENST00000552180 SHANK2Q9UPX8 1470 aa30.02■■■□□ 2.4
GPN3-210ENST00000552180 ESF1Q9H501 851 aaKnown RBP30.02■■■□□ 2.4
GPN3-210ENST00000552180 CNTLNQ9NXG0 1405 aa30.02■■■□□ 2.4
GPN3-210ENST00000552180 PPP6R1Q9UPN7 881 aa30■■■□□ 2.39
GPN3-210ENST00000552180 CROCC2H7BZ55 1655 aa30■■■□□ 2.39
GPN3-210ENST00000552180 KIF3BO15066 747 aa29.99■■■□□ 2.39
GPN3-210ENST00000552180 C3P01024 1663 aa29.97■■■□□ 2.39
GPN3-210ENST00000552180 LMTK3Q96Q04 1460 aa29.96■■■□□ 2.39
GPN3-210ENST00000552180 FAM50AQ14320 339 aaKnown RBP29.95■■■□□ 2.39
GPN3-210ENST00000552180 ZMYM3Q14202 1370 aa29.94■■■□□ 2.38
GPN3-210ENST00000552180 MROH2AA6NES4 1674 aa29.94■■■□□ 2.38
GPN3-210ENST00000552180 CLTCQ00610 1675 aaKnown RBP29.91■■■□□ 2.38
GPN3-210ENST00000552180 DUOX2Q9NRD8 1548 aa29.91■■■□□ 2.38
GPN3-210ENST00000552180 KIF15Q9NS87 1388 aa29.9■■■□□ 2.38
GPN3-210ENST00000552180 RRP7BPQ9NSQ0 103 aa29.9■■■□□ 2.38
GPN3-210ENST00000552180 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
GPN3-210ENST00000552180 SETD1BQ9UPS6 1966 aaKnown RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms