RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.57
SP1-204ENST00000551969 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
SP1-204ENST00000551969 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
SP1-204ENST00000551969 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
SP1-204ENST00000551969 KIF14Q15058 1648 aa18.54■□□□□ 0.56
SP1-204ENST00000551969 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
SP1-204ENST00000551969 ADGRL1O94910 1474 aa18.53■□□□□ 0.56
SP1-204ENST00000551969 CFAP74Q9C0B2 1584 aa18.53■□□□□ 0.56
SP1-204ENST00000551969 CCNB3Q8WWL7 1395 aa18.52■□□□□ 0.55
SP1-204ENST00000551969 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
SP1-204ENST00000551969 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
SP1-204ENST00000551969 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
SP1-204ENST00000551969 TTC37Q6PGP7 1564 aa18.48■□□□□ 0.55
SP1-204ENST00000551969 MAGI2Q86UL8 1455 aa18.48■□□□□ 0.55
SP1-204ENST00000551969 POGZQ7Z3K3 1410 aa18.48■□□□□ 0.55
SP1-204ENST00000551969 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
SP1-204ENST00000551969 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
SP1-204ENST00000551969 ESF1Q9H501 851 aaKnown RBP18.42■□□□□ 0.54
SP1-204ENST00000551969 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
SP1-204ENST00000551969 RSPH4AQ5TD94 716 aa18.41■□□□□ 0.54
SP1-204ENST00000551969 MLECQ14165 292 aa18.39■□□□□ 0.53
SP1-204ENST00000551969 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
SP1-204ENST00000551969 PLEKHH2Q8IVE3 1493 aa18.39■□□□□ 0.53
SP1-204ENST00000551969 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
SP1-204ENST00000551969 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
SP1-204ENST00000551969 ATP10AO60312 1499 aa18.37■□□□□ 0.53
SP1-204ENST00000551969 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
SP1-204ENST00000551969 KIAA1107Q9UPP5 1409 aa18.35■□□□□ 0.53
SP1-204ENST00000551969 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
SP1-204ENST00000551969 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
SP1-204ENST00000551969 EHBP1L1Q8N3D4 1523 aa18.34■□□□□ 0.53
SP1-204ENST00000551969 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
SP1-204ENST00000551969 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.53
SP1-204ENST00000551969 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
SP1-204ENST00000551969 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
SP1-204ENST00000551969 MLH3Q9UHC1 1453 aa18.31■□□□□ 0.52
SP1-204ENST00000551969 TRAPPC8Q9Y2L5 1435 aa18.31■□□□□ 0.52
SP1-204ENST00000551969 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
SP1-204ENST00000551969 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
SP1-204ENST00000551969 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
SP1-204ENST00000551969 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
SP1-204ENST00000551969 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
SP1-204ENST00000551969 ZNF644Q9H582 1327 aaPredicted RBP18.28■□□□□ 0.52
SP1-204ENST00000551969 LRRC9Q6ZRR7 1453 aa18.28■□□□□ 0.52
SP1-204ENST00000551969 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
SP1-204ENST00000551969 NCOA2Q15596 1464 aa18.27■□□□□ 0.52
SP1-204ENST00000551969 RICTORQ6R327 1708 aa18.27■□□□□ 0.52
SP1-204ENST00000551969 ABCC1P33527 1531 aa18.25■□□□□ 0.51
SP1-204ENST00000551969 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
SP1-204ENST00000551969 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
SP1-204ENST00000551969 PTPRMP28827 1452 aa18.24■□□□□ 0.51
SP1-204ENST00000551969 KDM5CP41229 1560 aa18.22■□□□□ 0.51
SP1-204ENST00000551969 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
SP1-204ENST00000551969 CDC42BPBQ9Y5S2 1711 aa18.22■□□□□ 0.51
SP1-204ENST00000551969 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
SP1-204ENST00000551969 HECW2Q9P2P5 1572 aa18.2■□□□□ 0.5
SP1-204ENST00000551969 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
SP1-204ENST00000551969 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
SP1-204ENST00000551969 GGT6Q6P531 493 aa18.19■□□□□ 0.5
SP1-204ENST00000551969 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
SP1-204ENST00000551969 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
SP1-204ENST00000551969 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
SP1-204ENST00000551969 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
SP1-204ENST00000551969 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
SP1-204ENST00000551969 BCORL1Q5H9F3 1711 aa18.15■□□□□ 0.5
SP1-204ENST00000551969 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
SP1-204ENST00000551969 CEBPAP49715 358 aaPredicted RBP18.14■□□□□ 0.49
SP1-204ENST00000551969 ADAMTSL3P82987 1691 aa18.14■□□□□ 0.49
SP1-204ENST00000551969 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
SP1-204ENST00000551969 CNTLNQ9NXG0 1405 aa18.14■□□□□ 0.49
SP1-204ENST00000551969 A2MP01023 1474 aa18.14■□□□□ 0.49
SP1-204ENST00000551969 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
SP1-204ENST00000551969 KIF3BO15066 747 aa18.13■□□□□ 0.49
SP1-204ENST00000551969 CAMSAP2Q08AD1 1489 aa18.13■□□□□ 0.49
SP1-204ENST00000551969 AGLP35573 1532 aa18.13■□□□□ 0.49
SP1-204ENST00000551969 REREQ9P2R6 1566 aa18.12■□□□□ 0.49
SP1-204ENST00000551969 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
SP1-204ENST00000551969 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
SP1-204ENST00000551969 MADDQ8WXG6 1647 aa18.09■□□□□ 0.49
SP1-204ENST00000551969 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
SP1-204ENST00000551969 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
SP1-204ENST00000551969 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
SP1-204ENST00000551969 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
SP1-204ENST00000551969 ZMYM3Q14202 1370 aa18.05■□□□□ 0.48
SP1-204ENST00000551969 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
SP1-204ENST00000551969 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
SP1-204ENST00000551969 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
SP1-204ENST00000551969 HSPA2P54652 639 aa18.02■□□□□ 0.48
SP1-204ENST00000551969 RIMS1Q86UR5 1692 aaKnown RBP18.02■□□□□ 0.47
SP1-204ENST00000551969 ARHGEF5Q12774 1597 aa18.01■□□□□ 0.47
SP1-204ENST00000551969 UHRF1BP1Q6BDS2 1440 aa18.01■□□□□ 0.47
SP1-204ENST00000551969 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
SP1-204ENST00000551969 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
SP1-204ENST00000551969 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
SP1-204ENST00000551969 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
SP1-204ENST00000551969 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
SP1-204ENST00000551969 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
SP1-204ENST00000551969 KIF15Q9NS87 1388 aa17.95■□□□□ 0.46
SP1-204ENST00000551969 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
SP1-204ENST00000551969 MSH5O43196 834 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms