RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 MTUS2Q5JR59 1369 aa16.68■□□□□ 0.26
PTCH1-225ENST00000551845 HSPA2P54652 639 aa16.68■□□□□ 0.26
PTCH1-225ENST00000551845 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
PTCH1-225ENST00000551845 PLCH2O75038 1416 aa16.65■□□□□ 0.26
PTCH1-225ENST00000551845 CERKQ8TCT0 537 aa16.65■□□□□ 0.26
PTCH1-225ENST00000551845 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
PTCH1-225ENST00000551845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
PTCH1-225ENST00000551845 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
PTCH1-225ENST00000551845 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
PTCH1-225ENST00000551845 DISP3Q9P2K9 1392 aa16.6■□□□□ 0.25
PTCH1-225ENST00000551845 AKNAQ7Z591 1439 aa16.6■□□□□ 0.25
PTCH1-225ENST00000551845 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
PTCH1-225ENST00000551845 POGZQ7Z3K3 1410 aa16.59■□□□□ 0.25
PTCH1-225ENST00000551845 FANCAO15360 1455 aa16.59■□□□□ 0.25
PTCH1-225ENST00000551845 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
PTCH1-225ENST00000551845 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.24
PTCH1-225ENST00000551845 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
PTCH1-225ENST00000551845 KIF14Q15058 1648 aa16.56■□□□□ 0.24
PTCH1-225ENST00000551845 MLECQ14165 292 aa16.56■□□□□ 0.24
PTCH1-225ENST00000551845 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
PTCH1-225ENST00000551845 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
PTCH1-225ENST00000551845 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
PTCH1-225ENST00000551845 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
PTCH1-225ENST00000551845 SOCS7O14512 581 aa16.54■□□□□ 0.24
PTCH1-225ENST00000551845 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
PTCH1-225ENST00000551845 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
PTCH1-225ENST00000551845 CFAP74Q9C0B2 1584 aa16.52■□□□□ 0.24
PTCH1-225ENST00000551845 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
PTCH1-225ENST00000551845 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.23
PTCH1-225ENST00000551845 ARHGAP5Q13017 1502 aa16.51■□□□□ 0.23
PTCH1-225ENST00000551845 ZFYVE16Q7Z3T8 1539 aa16.51■□□□□ 0.23
PTCH1-225ENST00000551845 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
PTCH1-225ENST00000551845 FER1L4A9Z1Z3 1794 aa16.51■□□□□ 0.23
PTCH1-225ENST00000551845 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
PTCH1-225ENST00000551845 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
PTCH1-225ENST00000551845 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
PTCH1-225ENST00000551845 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.23
PTCH1-225ENST00000551845 FOXD1Q16676 465 aa16.49■□□□□ 0.23
PTCH1-225ENST00000551845 YEATS2Q9ULM3 1422 aa16.49■□□□□ 0.23
PTCH1-225ENST00000551845 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
PTCH1-225ENST00000551845 SIGLEC1Q9BZZ2 1709 aa16.48■□□□□ 0.23
PTCH1-225ENST00000551845 ZMYM4Q5VZL5 1548 aa16.47■□□□□ 0.23
PTCH1-225ENST00000551845 RSPH4AQ5TD94 716 aa16.46■□□□□ 0.23
PTCH1-225ENST00000551845 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-225ENST00000551845 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
PTCH1-225ENST00000551845 MAGI2Q86UL8 1455 aa16.45■□□□□ 0.22
PTCH1-225ENST00000551845 PREX1Q8TCU6 1659 aa16.45■□□□□ 0.22
PTCH1-225ENST00000551845 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
PTCH1-225ENST00000551845 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-225ENST00000551845 KIAA1107Q9UPP5 1409 aa16.42■□□□□ 0.22
PTCH1-225ENST00000551845 SPATA31D1Q6ZQQ2 1576 aa16.42■□□□□ 0.22
PTCH1-225ENST00000551845 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
PTCH1-225ENST00000551845 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
PTCH1-225ENST00000551845 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
PTCH1-225ENST00000551845 TSPY4P0CV99 314 aa16.39■□□□□ 0.21
PTCH1-225ENST00000551845 TSPY10P0CW01 314 aa16.39■□□□□ 0.21
PTCH1-225ENST00000551845 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
PTCH1-225ENST00000551845 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
PTCH1-225ENST00000551845 ARHGEF12Q9NZN5 1544 aa16.39■□□□□ 0.21
PTCH1-225ENST00000551845 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
PTCH1-225ENST00000551845 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
PTCH1-225ENST00000551845 ATP10AO60312 1499 aa16.38■□□□□ 0.21
PTCH1-225ENST00000551845 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
PTCH1-225ENST00000551845 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
PTCH1-225ENST00000551845 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
PTCH1-225ENST00000551845 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
PTCH1-225ENST00000551845 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
PTCH1-225ENST00000551845 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
PTCH1-225ENST00000551845 CDC42BPAQ5VT25 1732 aa16.34■□□□□ 0.21
PTCH1-225ENST00000551845 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.2
PTCH1-225ENST00000551845 ABCC1P33527 1531 aa16.33■□□□□ 0.2
PTCH1-225ENST00000551845 SAMD9LQ8IVG5 1584 aa16.31■□□□□ 0.2
PTCH1-225ENST00000551845 MBD5Q9P267 1494 aa16.31■□□□□ 0.2
PTCH1-225ENST00000551845 PTPRTO14522 1441 aa16.3■□□□□ 0.2
PTCH1-225ENST00000551845 SETD1BQ9UPS6 1966 aaKnown RBP16.3■□□□□ 0.2
PTCH1-225ENST00000551845 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
PTCH1-225ENST00000551845 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
PTCH1-225ENST00000551845 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
PTCH1-225ENST00000551845 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
PTCH1-225ENST00000551845 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
PTCH1-225ENST00000551845 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.19
PTCH1-225ENST00000551845 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.19
PTCH1-225ENST00000551845 KDM5CP41229 1560 aa16.26■□□□□ 0.19
PTCH1-225ENST00000551845 C3P01024 1663 aa16.25■□□□□ 0.19
PTCH1-225ENST00000551845 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
PTCH1-225ENST00000551845 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
PTCH1-225ENST00000551845 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
PTCH1-225ENST00000551845 DIP2CQ9Y2E4 1556 aa16.21■□□□□ 0.19
PTCH1-225ENST00000551845 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
PTCH1-225ENST00000551845 GGT6Q6P531 493 aa16.2■□□□□ 0.18
PTCH1-225ENST00000551845 DHX29Q7Z478 1369 aaKnown RBP16.2■□□□□ 0.18
PTCH1-225ENST00000551845 TCOF1Q13428 1488 aaKnown RBP16.19■□□□□ 0.18
PTCH1-225ENST00000551845 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
PTCH1-225ENST00000551845 ABCC5O15440 1437 aa16.19■□□□□ 0.18
PTCH1-225ENST00000551845 REREQ9P2R6 1566 aa16.18■□□□□ 0.18
PTCH1-225ENST00000551845 A2MP01023 1474 aa16.18■□□□□ 0.18
PTCH1-225ENST00000551845 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
PTCH1-225ENST00000551845 KIF3BO15066 747 aa16.18■□□□□ 0.18
PTCH1-225ENST00000551845 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
PTCH1-225ENST00000551845 ATP7AQ04656 1500 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms