RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 RRBP1Q9P2E9 1410 aaKnown RBP11.62□□□□□ -0.55
USP44-206ENST00000551837 SUPT6HQ7KZ85 1726 aaKnown RBP11.62□□□□□ -0.55
USP44-206ENST00000551837 GLI2P10070 1586 aa11.61□□□□□ -0.55
USP44-206ENST00000551837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP44-206ENST00000551837 FAM69CQ0P6D2 419 aa11.6□□□□□ -0.55
USP44-206ENST00000551837 KIF14Q15058 1648 aa11.59□□□□□ -0.55
USP44-206ENST00000551837 ARAP3Q8WWN8 1544 aa11.59□□□□□ -0.55
USP44-206ENST00000551837 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
USP44-206ENST00000551837 FGD6Q6ZV73 1430 aa11.58□□□□□ -0.56
USP44-206ENST00000551837 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
USP44-206ENST00000551837 TCOF1Q13428 1488 aaKnown RBP11.57□□□□□ -0.56
USP44-206ENST00000551837 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
USP44-206ENST00000551837 ZNF644Q9H582 1327 aaPredicted RBP11.54□□□□□ -0.56
USP44-206ENST00000551837 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
USP44-206ENST00000551837 FAM50AQ14320 339 aaKnown RBP11.52□□□□□ -0.57
USP44-206ENST00000551837 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
USP44-206ENST00000551837 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
USP44-206ENST00000551837 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
USP44-206ENST00000551837 HRCP23327 699 aa11.51□□□□□ -0.57
USP44-206ENST00000551837 NEO1Q92859 1461 aa11.51□□□□□ -0.57
USP44-206ENST00000551837 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
USP44-206ENST00000551837 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
USP44-206ENST00000551837 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP44-206ENST00000551837 AKNAQ7Z591 1439 aa11.5□□□□□ -0.57
USP44-206ENST00000551837 FANCAO15360 1455 aa11.5□□□□□ -0.57
USP44-206ENST00000551837 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
USP44-206ENST00000551837 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
USP44-206ENST00000551837 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
USP44-206ENST00000551837 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
USP44-206ENST00000551837 TEX14Q8IWB6 1497 aa11.48□□□□□ -0.57
USP44-206ENST00000551837 ARHGAP5Q13017 1502 aa11.48□□□□□ -0.57
USP44-206ENST00000551837 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
USP44-206ENST00000551837 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
USP44-206ENST00000551837 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
USP44-206ENST00000551837 CDC42BPAQ5VT25 1732 aa11.47□□□□□ -0.57
USP44-206ENST00000551837 ABCC5O15440 1437 aa11.47□□□□□ -0.57
USP44-206ENST00000551837 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
USP44-206ENST00000551837 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
USP44-206ENST00000551837 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.57
USP44-206ENST00000551837 CAMSAP2Q08AD1 1489 aa11.46□□□□□ -0.57
USP44-206ENST00000551837 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.57
USP44-206ENST00000551837 ROCK1Q13464 1354 aa11.46□□□□□ -0.57
USP44-206ENST00000551837 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.58
USP44-206ENST00000551837 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
USP44-206ENST00000551837 DAPK1P53355 1430 aa11.44□□□□□ -0.58
USP44-206ENST00000551837 AFAP1Q8N556 730 aa11.44□□□□□ -0.58
USP44-206ENST00000551837 ARHGEF5Q12774 1597 aa11.44□□□□□ -0.58
USP44-206ENST00000551837 SAMD9LQ8IVG5 1584 aa11.44□□□□□ -0.58
USP44-206ENST00000551837 ARHGEF12Q9NZN5 1544 aa11.44□□□□□ -0.58
USP44-206ENST00000551837 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
USP44-206ENST00000551837 ADGRL1O94910 1474 aa11.43□□□□□ -0.58
USP44-206ENST00000551837 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
USP44-206ENST00000551837 DENND4BO75064 1496 aaPredicted RBP11.42□□□□□ -0.58
USP44-206ENST00000551837 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
USP44-206ENST00000551837 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
USP44-206ENST00000551837 ANKRD30AQ9BXX3 1397 aa11.41□□□□□ -0.58
USP44-206ENST00000551837 SPAG9O60271 1321 aaKnown RBP11.41□□□□□ -0.58
USP44-206ENST00000551837 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
USP44-206ENST00000551837 ITGAEP38570 1179 aa11.41□□□□□ -0.58
USP44-206ENST00000551837 ABCC1P33527 1531 aa11.4□□□□□ -0.58
USP44-206ENST00000551837 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
USP44-206ENST00000551837 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
USP44-206ENST00000551837 SHANK2Q9UPX8 1470 aa11.4□□□□□ -0.58
USP44-206ENST00000551837 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
USP44-206ENST00000551837 ZNF518AQ6AHZ1 1483 aa11.39□□□□□ -0.59
USP44-206ENST00000551837 DNMT1P26358 1616 aaKnown RBP11.39□□□□□ -0.59
USP44-206ENST00000551837 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
USP44-206ENST00000551837 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
USP44-206ENST00000551837 MAGI2Q86UL8 1455 aa11.38□□□□□ -0.59
USP44-206ENST00000551837 HFM1A2PYH4 1435 aa11.38□□□□□ -0.59
USP44-206ENST00000551837 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
USP44-206ENST00000551837 POGZQ7Z3K3 1410 aa11.37□□□□□ -0.59
USP44-206ENST00000551837 SETD5Q9C0A6 1442 aa11.37□□□□□ -0.59
USP44-206ENST00000551837 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
USP44-206ENST00000551837 PPRC1Q5VV67 1664 aaKnown RBP11.36□□□□□ -0.59
USP44-206ENST00000551837 NAIPQ13075 1403 aa11.36□□□□□ -0.59
USP44-206ENST00000551837 C9orf84Q5VXU9 1444 aa11.36□□□□□ -0.59
USP44-206ENST00000551837 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
USP44-206ENST00000551837 COL17A1Q9UMD9 1497 aaPredicted RBP11.36□□□□□ -0.59
USP44-206ENST00000551837 DCAF8L1A6NGE4 600 aa11.35□□□□□ -0.59
USP44-206ENST00000551837 DHX29Q7Z478 1369 aaKnown RBP11.35□□□□□ -0.59
USP44-206ENST00000551837 KDM5CP41229 1560 aa11.34□□□□□ -0.59
USP44-206ENST00000551837 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
USP44-206ENST00000551837 KIF15Q9NS87 1388 aa11.31□□□□□ -0.6
USP44-206ENST00000551837 ANKRD50Q9ULJ7 1429 aa11.31□□□□□ -0.6
USP44-206ENST00000551837 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
USP44-206ENST00000551837 ZMYM4Q5VZL5 1548 aa11.3□□□□□ -0.6
USP44-206ENST00000551837 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
USP44-206ENST00000551837 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
USP44-206ENST00000551837 PLXNC1O60486 1568 aa11.28□□□□□ -0.6
USP44-206ENST00000551837 ERBINQ96RT1 1412 aa11.28□□□□□ -0.6
USP44-206ENST00000551837 ATP10AO60312 1499 aa11.28□□□□□ -0.6
USP44-206ENST00000551837 RICTORQ6R327 1708 aa11.28□□□□□ -0.6
USP44-206ENST00000551837 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
USP44-206ENST00000551837 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.6
USP44-206ENST00000551837 A2MP01023 1474 aa11.27□□□□□ -0.6
USP44-206ENST00000551837 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.61
USP44-206ENST00000551837 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
USP44-206ENST00000551837 FRMPD1Q5SYB0 1578 aa11.26□□□□□ -0.61
USP44-206ENST00000551837 KIF3BO15066 747 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms