RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
RAB3IP-215ENST00000551641 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
RAB3IP-215ENST00000551641 TROQ12816 1431 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-215ENST00000551641 ZCCHC11Q5TAX3 1644 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-215ENST00000551641 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
RAB3IP-215ENST00000551641 ASXL2Q76L83 1435 aa11.71□□□□□ -0.53
RAB3IP-215ENST00000551641 KIF14Q15058 1648 aa11.71□□□□□ -0.53
RAB3IP-215ENST00000551641 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.54
RAB3IP-215ENST00000551641 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
RAB3IP-215ENST00000551641 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
RAB3IP-215ENST00000551641 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
RAB3IP-215ENST00000551641 KDM5BQ9UGL1 1544 aa11.68□□□□□ -0.54
RAB3IP-215ENST00000551641 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
RAB3IP-215ENST00000551641 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
RAB3IP-215ENST00000551641 SUPT6HQ7KZ85 1726 aaKnown RBP11.68□□□□□ -0.54
RAB3IP-215ENST00000551641 UHRF1BP1LA0JNW5 1464 aa11.67□□□□□ -0.54
RAB3IP-215ENST00000551641 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
RAB3IP-215ENST00000551641 MSH5O43196 834 aa11.66□□□□□ -0.54
RAB3IP-215ENST00000551641 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
RAB3IP-215ENST00000551641 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
RAB3IP-215ENST00000551641 GPATCH8Q9UKJ3 1502 aaKnown RBP11.62□□□□□ -0.55
RAB3IP-215ENST00000551641 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
RAB3IP-215ENST00000551641 TTC37Q6PGP7 1564 aa11.62□□□□□ -0.55
RAB3IP-215ENST00000551641 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
RAB3IP-215ENST00000551641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.61□□□□□ -0.55
RAB3IP-215ENST00000551641 EFCAB2Q5VUJ9 269 aa11.6□□□□□ -0.55
RAB3IP-215ENST00000551641 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
RAB3IP-215ENST00000551641 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
RAB3IP-215ENST00000551641 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
RAB3IP-215ENST00000551641 AFAP1Q8N556 730 aa11.59□□□□□ -0.55
RAB3IP-215ENST00000551641 CD109Q6YHK3 1445 aa11.59□□□□□ -0.55
RAB3IP-215ENST00000551641 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
RAB3IP-215ENST00000551641 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
RAB3IP-215ENST00000551641 RAPGEF3O95398 923 aa11.57□□□□□ -0.56
RAB3IP-215ENST00000551641 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
RAB3IP-215ENST00000551641 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
RAB3IP-215ENST00000551641 NAIPQ13075 1403 aa11.57□□□□□ -0.56
RAB3IP-215ENST00000551641 TCOF1Q13428 1488 aaKnown RBP11.56□□□□□ -0.56
RAB3IP-215ENST00000551641 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
RAB3IP-215ENST00000551641 CAMSAP2Q08AD1 1489 aa11.56□□□□□ -0.56
RAB3IP-215ENST00000551641 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
RAB3IP-215ENST00000551641 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
RAB3IP-215ENST00000551641 PLCH2O75038 1416 aa11.54□□□□□ -0.56
RAB3IP-215ENST00000551641 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
RAB3IP-215ENST00000551641 FANCAO15360 1455 aa11.53□□□□□ -0.56
RAB3IP-215ENST00000551641 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
RAB3IP-215ENST00000551641 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.57
RAB3IP-215ENST00000551641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.52□□□□□ -0.575e-6■■■■□ 19.5
RAB3IP-215ENST00000551641 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.57
RAB3IP-215ENST00000551641 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
RAB3IP-215ENST00000551641 MYO5CQ9NQX4 1742 aa11.51□□□□□ -0.57
RAB3IP-215ENST00000551641 GCC2Q8IWJ2 1684 aa11.51□□□□□ -0.57
RAB3IP-215ENST00000551641 ABCC5O15440 1437 aa11.5□□□□□ -0.57
RAB3IP-215ENST00000551641 ITSN2Q9NZM3 1697 aa11.5□□□□□ -0.57
RAB3IP-215ENST00000551641 DAPK1P53355 1430 aa11.5□□□□□ -0.57
RAB3IP-215ENST00000551641 TRAPPC8Q9Y2L5 1435 aa11.5□□□□□ -0.57
RAB3IP-215ENST00000551641 ADGRL1O94910 1474 aa11.49□□□□□ -0.57
RAB3IP-215ENST00000551641 SAMD9LQ8IVG5 1584 aa11.49□□□□□ -0.57
RAB3IP-215ENST00000551641 SPAG9O60271 1321 aaKnown RBP11.49□□□□□ -0.57
RAB3IP-215ENST00000551641 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
RAB3IP-215ENST00000551641 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
RAB3IP-215ENST00000551641 ARHGEF12Q9NZN5 1544 aa11.48□□□□□ -0.57
RAB3IP-215ENST00000551641 DIP2BQ9P265 1576 aa11.47□□□□□ -0.57
RAB3IP-215ENST00000551641 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
RAB3IP-215ENST00000551641 ABCA9Q8IUA7 1624 aa11.47□□□□□ -0.57
RAB3IP-215ENST00000551641 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
RAB3IP-215ENST00000551641 DENND4BO75064 1496 aaPredicted RBP11.46□□□□□ -0.57
RAB3IP-215ENST00000551641 C9orf84Q5VXU9 1444 aa11.46□□□□□ -0.58
RAB3IP-215ENST00000551641 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
RAB3IP-215ENST00000551641 MLECQ14165 292 aa11.44□□□□□ -0.58
RAB3IP-215ENST00000551641 CCDC141Q6ZP82 1450 aa11.43□□□□□ -0.58
RAB3IP-215ENST00000551641 MBD5Q9P267 1494 aa11.43□□□□□ -0.58
RAB3IP-215ENST00000551641 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
RAB3IP-215ENST00000551641 KIF15Q9NS87 1388 aa11.43□□□□□ -0.58
RAB3IP-215ENST00000551641 KDM6BO15054 1643 aa11.42□□□□□ -0.58
RAB3IP-215ENST00000551641 GGT6Q6P531 493 aa11.41□□□□□ -0.58
RAB3IP-215ENST00000551641 DNMT1P26358 1616 aaKnown RBP11.41□□□□□ -0.58
RAB3IP-215ENST00000551641 ROCK1Q13464 1354 aa11.41□□□□□ -0.58
RAB3IP-215ENST00000551641 KIF3BO15066 747 aa11.41□□□□□ -0.58
RAB3IP-215ENST00000551641 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
RAB3IP-215ENST00000551641 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
RAB3IP-215ENST00000551641 ABCC1P33527 1531 aa11.4□□□□□ -0.58
RAB3IP-215ENST00000551641 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.59
RAB3IP-215ENST00000551641 NCOA1Q15788 1441 aa11.4□□□□□ -0.59
RAB3IP-215ENST00000551641 PLEKHH2Q8IVE3 1493 aa11.39□□□□□ -0.59
RAB3IP-215ENST00000551641 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
RAB3IP-215ENST00000551641 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
RAB3IP-215ENST00000551641 MAP3K4Q9Y6R4 1608 aa11.38□□□□□ -0.59
RAB3IP-215ENST00000551641 KIAA1107Q9UPP5 1409 aa11.38□□□□□ -0.59
RAB3IP-215ENST00000551641 ANP32CO43423 234 aa11.38□□□□□ -0.59
RAB3IP-215ENST00000551641 ANKRD50Q9ULJ7 1429 aa11.38□□□□□ -0.59
RAB3IP-215ENST00000551641 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
RAB3IP-215ENST00000551641 GLI2P10070 1586 aa11.36□□□□□ -0.59
RAB3IP-215ENST00000551641 NUP155O75694 1391 aa11.36□□□□□ -0.59
RAB3IP-215ENST00000551641 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
RAB3IP-215ENST00000551641 POGZQ7Z3K3 1410 aa11.36□□□□□ -0.59
RAB3IP-215ENST00000551641 MPHOSPH9Q99550 1183 aa11.36□□□□□ -0.59
RAB3IP-215ENST00000551641 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
RAB3IP-215ENST00000551641 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
RAB3IP-215ENST00000551641 NEO1Q92859 1461 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms