RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 SCAPERQ9BY12 1400 aa37.58■■■■□ 3.61
TROAP-216ENST00000551567 ZFYVE16Q7Z3T8 1539 aa37.57■■■■□ 3.61
TROAP-216ENST00000551567 POGZQ7Z3K3 1410 aa37.56■■■■□ 3.6
TROAP-216ENST00000551567 MADDQ8WXG6 1647 aa37.54■■■■□ 3.6
TROAP-216ENST00000551567 YEATS2Q9ULM3 1422 aa37.53■■■■□ 3.6
TROAP-216ENST00000551567 FYCO1Q9BQS8 1478 aa37.53■■■■□ 3.6
TROAP-216ENST00000551567 ARHGAP5Q13017 1502 aa37.53■■■■□ 3.6
TROAP-216ENST00000551567 EFCAB2Q5VUJ9 269 aa37.53■■■■□ 3.6
TROAP-216ENST00000551567 PTPRMP28827 1452 aa37.51■■■■□ 3.59
TROAP-216ENST00000551567 MAGI2Q86UL8 1455 aa37.49■■■■□ 3.59
TROAP-216ENST00000551567 SIGLEC1Q9BZZ2 1709 aa37.49■■■■□ 3.59
TROAP-216ENST00000551567 CDC42BPBQ9Y5S2 1711 aa37.47■■■■□ 3.59
TROAP-216ENST00000551567 PREX2Q70Z35 1606 aa37.44■■■■□ 3.58
TROAP-216ENST00000551567 RIMS1Q86UR5 1692 aaKnown RBP37.42■■■■□ 3.58
TROAP-216ENST00000551567 ZNF518AQ6AHZ1 1483 aa37.38■■■■□ 3.57
TROAP-216ENST00000551567 CDC42BPAQ5VT25 1732 aa37.36■■■■□ 3.57
TROAP-216ENST00000551567 KDM5CP41229 1560 aa37.34■■■■□ 3.57
TROAP-216ENST00000551567 ATP10AO60312 1499 aa37.31■■■■□ 3.56
TROAP-216ENST00000551567 ABCC1P33527 1531 aa37.3■■■■□ 3.56
TROAP-216ENST00000551567 AFAP1Q8N556 730 aa37.29■■■■□ 3.56
TROAP-216ENST00000551567 C9orf84Q5VXU9 1444 aa37.28■■■■□ 3.56
TROAP-216ENST00000551567 ITSN2Q9NZM3 1697 aa37.28■■■■□ 3.56
TROAP-216ENST00000551567 FER1L4A9Z1Z3 1794 aa37.27■■■■□ 3.56
TROAP-216ENST00000551567 MLECQ14165 292 aa37.26■■■■□ 3.56
TROAP-216ENST00000551567 CEP162Q5TB80 1403 aa37.24■■■■□ 3.55
TROAP-216ENST00000551567 ARHGEF12Q9NZN5 1544 aa37.24■■■■□ 3.55
TROAP-216ENST00000551567 DIP2CQ9Y2E4 1556 aa37.21■■■■□ 3.55
TROAP-216ENST00000551567 MYT1LQ9UL68 1186 aa37.21■■■■□ 3.55
TROAP-216ENST00000551567 TRAPPC8Q9Y2L5 1435 aa37.19■■■■□ 3.54
TROAP-216ENST00000551567 ABCA6Q8N139 1617 aa37.19■■■■□ 3.54
TROAP-216ENST00000551567 PLPPR3Q6T4P5 718 aa37.18■■■■□ 3.54
TROAP-216ENST00000551567 SAMD9LQ8IVG5 1584 aa37.16■■■■□ 3.54
TROAP-216ENST00000551567 GPATCH8Q9UKJ3 1502 aaKnown RBP37.15■■■■□ 3.54
TROAP-216ENST00000551567 MLH3Q9UHC1 1453 aa37.14■■■■□ 3.54
TROAP-216ENST00000551567 MTUS2Q5JR59 1369 aa37.13■■■■□ 3.53
TROAP-216ENST00000551567 LMTK3Q96Q04 1460 aa37.13■■■■□ 3.53
TROAP-216ENST00000551567 ZNF777Q9ULD5 760 aaPredicted RBP37.12■■■■□ 3.53
TROAP-216ENST00000551567 REREQ9P2R6 1566 aa37.1■■■■□ 3.53
TROAP-216ENST00000551567 SYCP2Q9BX26 1530 aa37.1■■■■□ 3.53
TROAP-216ENST00000551567 KIDINS220Q9ULH0 1771 aa37.09■■■■□ 3.53
TROAP-216ENST00000551567 EHBP1L1Q8N3D4 1523 aa37.05■■■■□ 3.52
TROAP-216ENST00000551567 CCNB3Q8WWL7 1395 aa37.05■■■■□ 3.52
TROAP-216ENST00000551567 TIAM1Q13009 1591 aa37■■■■□ 3.51
TROAP-216ENST00000551567 CFDP1Q9UEE9 299 aaPredicted RBP37■■■■□ 3.51
TROAP-216ENST00000551567 HNRNPMP52272 730 aaKnown RBP eCLIP36.97■■■■□ 3.51
TROAP-216ENST00000551567 LOC105371045A0A1W2PR82 267 aa36.96■■■■□ 3.51
TROAP-216ENST00000551567 ILDR1Q86SU0 546 aaPredicted RBP36.96■■■■□ 3.51
TROAP-216ENST00000551567 AGLP35573 1532 aa36.95■■■■□ 3.51
TROAP-216ENST00000551567 PLEKHH2Q8IVE3 1493 aa36.95■■■■□ 3.51
TROAP-216ENST00000551567 KIAA1107Q9UPP5 1409 aa36.93■■■■□ 3.5
TROAP-216ENST00000551567 HSPA2P54652 639 aa36.92■■■■□ 3.5
TROAP-216ENST00000551567 SPAG9O60271 1321 aaKnown RBP36.9■■■■□ 3.5
TROAP-216ENST00000551567 CEBPAP49715 358 aaPredicted RBP36.9■■■■□ 3.5
TROAP-216ENST00000551567 INO80Q9ULG1 1556 aaPredicted RBP36.9■■■■□ 3.5
TROAP-216ENST00000551567 ATP7AQ04656 1500 aa36.9■■■■□ 3.5
TROAP-216ENST00000551567 PREX1Q8TCU6 1659 aa36.9■■■■□ 3.5
TROAP-216ENST00000551567 SUPT6HQ7KZ85 1726 aaKnown RBP36.86■■■■□ 3.49
TROAP-216ENST00000551567 C3P01024 1663 aa36.84■■■■□ 3.49
TROAP-216ENST00000551567 ZNF644Q9H582 1327 aaPredicted RBP36.84■■■■□ 3.49
TROAP-216ENST00000551567 VPS8Q8N3P4 1428 aa36.82■■■■□ 3.48
TROAP-216ENST00000551567 NCOA2Q15596 1464 aa36.81■■■■□ 3.48
TROAP-216ENST00000551567 ESF1Q9H501 851 aaKnown RBP36.79■■■■□ 3.48
TROAP-216ENST00000551567 PLXNC1O60486 1568 aa36.76■■■■□ 3.48
TROAP-216ENST00000551567 MBD5Q9P267 1494 aa36.75■■■■□ 3.47
TROAP-216ENST00000551567 A2MP01023 1474 aa36.73■■■■□ 3.47
TROAP-216ENST00000551567 ADGBQ8N7X0 1667 aa36.73■■■■□ 3.47
TROAP-216ENST00000551567 SETD1BQ9UPS6 1966 aaKnown RBP36.71■■■■□ 3.47
TROAP-216ENST00000551567 UHRF1BP1Q6BDS2 1440 aa36.7■■■■□ 3.47
TROAP-216ENST00000551567 CNTLNQ9NXG0 1405 aa36.7■■■■□ 3.47
TROAP-216ENST00000551567 CAMSAP2Q08AD1 1489 aa36.69■■■■□ 3.46
TROAP-216ENST00000551567 LRRC9Q6ZRR7 1453 aa36.68■■■■□ 3.46
TROAP-216ENST00000551567 MROH2AA6NES4 1674 aa36.67■■■■□ 3.46
TROAP-216ENST00000551567 CLTCQ00610 1675 aaKnown RBP36.64■■■■□ 3.46
TROAP-216ENST00000551567 CCDC141Q6ZP82 1450 aa36.62■■■■□ 3.45
TROAP-216ENST00000551567 RTEL1-TNFRSF6BF6WH68 1400 aa36.59■■■■□ 3.45
TROAP-216ENST00000551567 STRCQ7RTU9 1775 aa36.58■■■■□ 3.45
TROAP-216ENST00000551567 MAP3K1Q13233 1512 aa36.57■■■■□ 3.44
TROAP-216ENST00000551567 GGT6Q6P531 493 aa36.55■■■■□ 3.44
TROAP-216ENST00000551567 ZMYM3Q14202 1370 aa36.53■■■■□ 3.44
TROAP-216ENST00000551567 KANK4Q5T7N3 995 aaPredicted RBP36.53■■■■□ 3.44
TROAP-216ENST00000551567 ARHGEF5Q12774 1597 aa36.53■■■■□ 3.44
TROAP-216ENST00000551567 FBXO41Q8TF61 875 aa36.52■■■■□ 3.44
TROAP-216ENST00000551567 NPATQ14207 1427 aa36.5■■■■□ 3.43
TROAP-216ENST00000551567 DHX29Q7Z478 1369 aaKnown RBP36.48■■■■□ 3.43
TROAP-216ENST00000551567 RSPH4AQ5TD94 716 aa36.46■■■■□ 3.43
TROAP-216ENST00000551567 MYOM3Q5VTT5 1437 aa36.42■■■■□ 3.42
TROAP-216ENST00000551567 MYO3AQ8NEV4 1616 aa36.41■■■■□ 3.42
TROAP-216ENST00000551567 PTPRKQ15262 1439 aa36.39■■■■□ 3.42
TROAP-216ENST00000551567 KIF3BO15066 747 aa36.38■■■■□ 3.41
TROAP-216ENST00000551567 PPP6R1Q9UPN7 881 aa36.38■■■■□ 3.41
TROAP-216ENST00000551567 DMRT2Q9Y5R5 561 aa36.38■■■■□ 3.41
TROAP-216ENST00000551567 TSPY4P0CV99 314 aa36.37■■■■□ 3.41
TROAP-216ENST00000551567 TSPY10P0CW01 314 aa36.37■■■■□ 3.41
TROAP-216ENST00000551567 ZNF142P52746 1687 aaPredicted RBP36.36■■■■□ 3.41
TROAP-216ENST00000551567 MIA2Q96PC5 1412 aa36.35■■■■□ 3.41
TROAP-216ENST00000551567 MAST1Q9Y2H9 1570 aa36.35■■■■□ 3.41
TROAP-216ENST00000551567 CAMSAP1Q5T5Y3 1602 aa36.34■■■■□ 3.41
TROAP-216ENST00000551567 NCOA1Q15788 1441 aa36.34■■■■□ 3.41
TROAP-216ENST00000551567 APLP2Q06481 763 aa36.32■■■■□ 3.4
TROAP-216ENST00000551567 CERKQ8TCT0 537 aa36.32■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms